| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312748
Identifier: 83312748
GI number: 83312748
Start: 4011354
End: 4011791
Strand: Reverse
Name: 83312748
Synonym: amb3649
Alternate gene names: NA
Gene position: 4011791-4011354 (Counterclockwise)
Preceding gene: 83312749
Following gene: 83312746
Centisome position: 80.77
GC content: 57.53
Gene sequence:
>438_bases ATGGCAGAATTCCTCGGCACTGAAGCCGAGGAATTCTCTCCAGTCTTATATTTCGGTACTTTCGGCAAGATGCAACGCGT CCTCTATGTCGACGCCAAGGTAGCGGACCGTGCTCTCGATTTTGGCGTGGCCAAGCAGGATCTGCACGGCGCGCAGGTTG CCCGTCTGCTTGTAGATGATGGACGCCTTGGTGCGGCGCAGAGAATGCGTTCCGTAGTCCTCCGGACGCAGACCGATCCC AGTAACCCATTCATCGACGAGACGCGCATACTGACGAGTGCTGATGTGCTTGGTATGATCGACCCTGCTGGGAAACACGA AATCGTCAAGCGCGCCTCCTCGACGATCGAGCCAGGCAAGAATGCTGTTGCGAGCGGGTTCAAGGAGCTCGAACTGAACC GGCCGGCCGGTTTTCTGCTGAACGACGATCGCCCTTGA
Upstream 100 bases:
>100_bases TCGCAGCCTGCCGTCAACGTCATCAGGATTTCGGTATACCGCCCCCCTAATTTGCCGTGATACCGACCGAGTTGGGCTTG GCTCAGGTCATGCGGATAGC
Downstream 100 bases:
>100_bases GCGAACTTGCCCGCCTCTGACGACATCTCCAATTCTGATCTTGACGATGTCGCACCCTCGAAGCTTGCTGTCGATCGCCA GGTCGAACATCGCGCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAEFLGTEAEEFSPVLYFGTFGKMQRVLYVDAKVADRALDFGVAKQDLHGAQVARLLVDDGRLGAAQRMRSVVLRTQTDP SNPFIDETRILTSADVLGMIDPAGKHEIVKRASSTIEPGKNAVASGFKELELNRPAGFLLNDDRP
Sequences:
>Translated_145_residues MAEFLGTEAEEFSPVLYFGTFGKMQRVLYVDAKVADRALDFGVAKQDLHGAQVARLLVDDGRLGAAQRMRSVVLRTQTDP SNPFIDETRILTSADVLGMIDPAGKHEIVKRASSTIEPGKNAVASGFKELELNRPAGFLLNDDRP >Mature_144_residues AEFLGTEAEEFSPVLYFGTFGKMQRVLYVDAKVADRALDFGVAKQDLHGAQVARLLVDDGRLGAAQRMRSVVLRTQTDPS NPFIDETRILTSADVLGMIDPAGKHEIVKRASSTIEPGKNAVASGFKELELNRPAGFLLNDDRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15848; Mature: 15717
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFLGTEAEEFSPVLYFGTFGKMQRVLYVDAKVADRALDFGVAKQDLHGAQVARLLVDD CCCCCCCCHHHCCCEEEECCHHHHHEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GRLGAAQRMRSVVLRTQTDPSNPFIDETRILTSADVLGMIDPAGKHEIVKRASSTIEPGK CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCH NAVASGFKELELNRPAGFLLNDDRP HHHHCCHHHEECCCCCCEEECCCCC >Mature Secondary Structure AEFLGTEAEEFSPVLYFGTFGKMQRVLYVDAKVADRALDFGVAKQDLHGAQVARLLVDD CCCCCCCHHHCCCEEEECCHHHHHEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GRLGAAQRMRSVVLRTQTDPSNPFIDETRILTSADVLGMIDPAGKHEIVKRASSTIEPGK CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCH NAVASGFKELELNRPAGFLLNDDRP HHHHCCHHHEECCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA