| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312746
Identifier: 83312746
GI number: 83312746
Start: 4009029
End: 4009631
Strand: Reverse
Name: 83312746
Synonym: amb3647
Alternate gene names: NA
Gene position: 4009631-4009029 (Counterclockwise)
Preceding gene: 83312748
Following gene: 83312742
Centisome position: 80.72
GC content: 52.9
Gene sequence:
>603_bases GTGAGGGGGATGCTAAATCTATCTGATTGGAAGCGGCTATTCCTCGGATGGCGGCGAACCACTTGGAAGTTCCCCTTGGC CTTTGGGGTGTCCAACTTCCGATTTCGCCCCTCGGCTTGCTGCGGCCTGAAGGCGCTCAGATATCTTTTCTGGCCTGTCT GCGCGATCTCCACCGCTGTCATCGGCAAGCTTGCTCTCAAGGGCACGTTCTCGCCCTTCAAGGTAAGAACAGTATCCTTT GCGCACTTCGTCGTGGCCTTCCGGCTCACTTCCACATACGGCCTTTCCTGCCGCTTGATCCCAAATAAAGGGGCGTACCA TCCACCGTTCGCCACATGCCCTGAAAAAAGCTTCGCAATAGTCTTTTATGTCACCCTTTCCAAGGCGTTGAGGGTCCAGC ATGCGATCTTCAGCCTTATTCAATTCGTTCGGATCGCAGTCAATCCAAAATATTGGATAAGGAGTTCCTCCAAGGATTCC CTTGAGCGGGTGAGAGCCATCAAGGCGAATTGCTTCGCTGGCGGACTCTGTTTTGTAGTGGTTTACCTGGAACCCATACG AGTCCAGGTGATTTTCAACCAGGAGATAGACGAGATCTGCTGA
Upstream 100 bases:
>100_bases TGGGCGCCTAGGTCAGGTTCGCGGAAACCCTTAGATTTCGGCCCCGTTCAGACAGGCTAAATCGGCTTGATTTCGGTTCA TCCCCTTTCGTTCGGGGGAT
Downstream 100 bases:
>100_bases AATAACCATATGGCGCGGGGTGGCATGAGCGGCTAGCCGAAATCCCAAATCCATCTGAGGGCCGATGAATTCCAGTTGCC CGCTATCGTTTTTGCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRGMLNLSDWKRLFLGWRRTTWKFPLAFGVSNFRFRPSACCGLKALRYLFWPVCAISTAVIGKLALKGTFSPFKVRTVSF AHFVVAFRLTSTYGLSCRLIPNKGAYHPPFATCPEKSFAIVFYVTLSKALRVQHAIFSLIQFVRIAVNPKYWIRSSSKDS LERVRAIKANCFAGGLCFVVVYLEPIRVQVIFNQEIDEIC
Sequences:
>Translated_200_residues MRGMLNLSDWKRLFLGWRRTTWKFPLAFGVSNFRFRPSACCGLKALRYLFWPVCAISTAVIGKLALKGTFSPFKVRTVSF AHFVVAFRLTSTYGLSCRLIPNKGAYHPPFATCPEKSFAIVFYVTLSKALRVQHAIFSLIQFVRIAVNPKYWIRSSSKDS LERVRAIKANCFAGGLCFVVVYLEPIRVQVIFNQEIDEIC >Mature_200_residues MRGMLNLSDWKRLFLGWRRTTWKFPLAFGVSNFRFRPSACCGLKALRYLFWPVCAISTAVIGKLALKGTFSPFKVRTVSF AHFVVAFRLTSTYGLSCRLIPNKGAYHPPFATCPEKSFAIVFYVTLSKALRVQHAIFSLIQFVRIAVNPKYWIRSSSKDS LERVRAIKANCFAGGLCFVVVYLEPIRVQVIFNQEIDEIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22820; Mature: 22820
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGMLNLSDWKRLFLGWRRTTWKFPLAFGVSNFRFRPSACCGLKALRYLFWPVCAISTAV CCCCCCHHHHHHHHHHHCCCCEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGKLALKGTFSPFKVRTVSFAHFVVAFRLTSTYGLSCRLIPNKGAYHPPFATCPEKSFAI HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEE VFYVTLSKALRVQHAIFSLIQFVRIAVNPKYWIRSSSKDSLERVRAIKANCFAGGLCFVV EEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHCCCCCHHHHEE VYLEPIRVQVIFNQEIDEIC EEECCEEEEEEECCCHHHCC >Mature Secondary Structure MRGMLNLSDWKRLFLGWRRTTWKFPLAFGVSNFRFRPSACCGLKALRYLFWPVCAISTAV CCCCCCHHHHHHHHHHHCCCCEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGKLALKGTFSPFKVRTVSFAHFVVAFRLTSTYGLSCRLIPNKGAYHPPFATCPEKSFAI HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEE VFYVTLSKALRVQHAIFSLIQFVRIAVNPKYWIRSSSKDSLERVRAIKANCFAGGLCFVV EEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHCCCCCHHHHEE VYLEPIRVQVIFNQEIDEIC EEECCEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA