Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83312583

Identifier: 83312583

GI number: 83312583

Start: 3830219

End: 3831373

Strand: Reverse

Name: 83312583

Synonym: amb3484

Alternate gene names: NA

Gene position: 3831373-3830219 (Counterclockwise)

Preceding gene: 83312584

Following gene: 83312582

Centisome position: 77.13

GC content: 67.36

Gene sequence:

>1155_bases
ATGATGTTCGTCTGGCAGGGCCTCTGTTTGGTCCTGATCGCATTGACGGTGGCGGGCTGCCTGTTCCAGGTGGCTTCGGC
CGCGCTGGTCCGGCGCTTCCGGCGGGCACCGGAGCCGGTTCCCGCCGCCCGGCCGCCCATTTCGGTGATGAAGCCCCTGT
GCGGCGCCGAGCACGGCATGGCCGCCAATCTGGACTCCTGCCTGCGCCAGGACTATCCCCGGTTTCAGTTGGTATTCGGC
GTCGCCGACCCCGCCGATCCAGCCCTGGACGTGGTCAAGGCGCTGCCCGGCGACGTGGAGGGGGCCGAAATCGACTGGGT
GGCCGATTCCGCCCGCCACGGCCACAATCTCAAGGTGGGCAACCTCCTCAACATGTGGCCCAAGGTGCGCCACGACGTGA
TCGCCATCGCCGACAGCGATATCCGGGTGGGACCCCATTATCTGGACGATCTGGCCGCGCCCTTTGACGACCCCAAGGTG
GGAATCGTCACCTGTCTTTACGTCGGGCGGCCCGAGCCCGACCTGTGGAGTTCCCTGGGCGCCATGGGCATCAACCATGG
CTTTTTGCCCGGCGCGGTGCTGGCCCGCGCCATCGGCCGCAAGGACGGTTGTTTCGGCGCCACCATGGCTGTGCGCCGCG
AGGTGCTGGAAAAGGGCGGCGGCCTCGCGGCCCTCTCCCAGGTGCTGGCCGATGATTGGGTGCTGGGGCGCATGGTGCGC
GACCAGGGGCTCGAGATCGTCCTGGCGGCGCGGCCGGTGGACATGAACGTCCACGAGCCTTCGCTCAAAACTTTGCTCGA
TCATGAAATTCGCTGGGGCCGGACCATTGCGGCGGTGGACCGGACTTCCTACATGGCTTCGGTGATCACCCAGCCGGTGG
CTCTTGCGGCGCTGGCGGTGCTGGCGGGCGGCGCGTGGTGGCCGTCCGTGGCGGCGCTGGCGTTGGCGGTGCTTTGCCGG
TTGTGGGCGGTTCGGGTCGAGGAGCGGGCGCTGGGGCTTCCCCGGTGCGGTCTCGGTCTGCTGGGCATGAGGGAAATTCT
GTCGTTCGTCGTCTATGTTGTCGCATGTTGCGGACGGACTGTGGTATGGCGTGGCCGGCGATTCGCCGTCCGTGCCGACG
GCACACTCGATCAGGTTGAAGGCAGTCAGACATGA

Upstream 100 bases:

>100_bases
GTGCGGCGCTCGGAATTCGGGTCCATCTTCCGGTCCAAGGGCCTGGACGGGCTGATCGAGACCCTGGAGAAGCAGACCGC
GGCATTGGACAAGTAACGCC

Downstream 100 bases:

>100_bases
AGAAGTCGCTTTTCCTCAATCCGCCCTCGTTCGAAGGTTATGACGGCGGGGCCGGTGCCCGTTTCCAGGCGAAGCGCGAG
ATCAAGTCCAACTGGTATCC

Product: cell wall biosynthesis glycosyltransferase

Products: UDP; D-glucosyl-N-acylsphingosine

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGMAANLDSCLRQDYPRFQLVFG
VADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVGNLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKV
GIVTCLYVGRPEPDLWSSLGAMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR
DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAVLAGGAWWPSVAALALAVLCR
LWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRTVVWRGRRFAVRADGTLDQVEGSQT

Sequences:

>Translated_384_residues
MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGMAANLDSCLRQDYPRFQLVFG
VADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVGNLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKV
GIVTCLYVGRPEPDLWSSLGAMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR
DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAVLAGGAWWPSVAALALAVLCR
LWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRTVVWRGRRFAVRADGTLDQVEGSQT
>Mature_384_residues
MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGMAANLDSCLRQDYPRFQLVFG
VADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVGNLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKV
GIVTCLYVGRPEPDLWSSLGAMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR
DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAVLAGGAWWPSVAALALAVLCR
LWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRTVVWRGRRFAVRADGTLDQVEGSQT

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507811, Length=364, Percent_Identity=24.7252747252747, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI32566973, Length=390, Percent_Identity=20.7692307692308, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32564728, Length=270, Percent_Identity=21.8518518518519, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25149574, Length=270, Percent_Identity=21.8518518518519, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25149577, Length=270, Percent_Identity=21.8518518518519, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25149580, Length=270, Percent_Identity=21.8518518518519, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24657569, Length=355, Percent_Identity=22.2535211267606, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.80

Molecular weight: Translated: 41369; Mature: 41369

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC
AANLDSCLRQDYPRFQLVFGVADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVG
CCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
NLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKVGIVTCLYVGRPEPDLWSSLG
HHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHH
AMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR
HHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAV
HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGGAWWPSVAALALAVLCRLWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VVWRGRRFAVRADGTLDQVEGSQT
EEECCCEEEEECCCCHHHCCCCCC
>Mature Secondary Structure
MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC
AANLDSCLRQDYPRFQLVFGVADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVG
CCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
NLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKVGIVTCLYVGRPEPDLWSSLG
HHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHH
AMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR
HHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAV
HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGGAWWPSVAALALAVLCRLWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VVWRGRRFAVRADGTLDQVEGSQT
EEECCCEEEEECCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose; N-acylsphingosine

Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA