Click here to switch to the map view.

The map label for this gene is yrbC [C]

Identifier: 83312584

GI number: 83312584

Start: 3831378

End: 3831986

Strand: Reverse

Name: yrbC [C]

Synonym: amb3485

Alternate gene names: 83312584

Gene position: 3831986-3831378 (Counterclockwise)

Preceding gene: 83312586

Following gene: 83312583

Centisome position: 77.15

GC content: 65.52

Gene sequence:

>609_bases
ATGCGTTCGTTTCTTGCCGTTTCGATGCTGGCGCTGGTTTTGTGGTCTGGTCTGGCGGAGCCCGCTGCGGCACAGGCGGG
GGGGCCGGAGGCCGTCATCCGTACGTTCAGCGACCGCCTGCTCGAGTCCATGAAGGGTGGGGCCAAGCTGGGCTTCAAGG
GCCGTGCCGAGAAAATGCGCCCCGCCGTGGCCGAAGCCTATGACATGCCCTCCATGACCCGTTCCACCCTGGGCACTGCC
GCCACCAAGATGTCCCCCGACGAGGCCGGCAAGCTGGCCCAGGCCTATTCCAACTTTTCCGTGGCCACCTATGCCGCCCA
GTTCAACGAATGGAACGGCGAGCGGTTCGAGGTGGGCGAGCAGCGCCCCTCGGCCGGCGGCTCGGTGATCGTCTCGTCCT
GGCTGGTGCCGAAGAACGGCGATCCGACCCAGATCGACTACGTGATGCGCCAGGATCAGGGGCAGTGGCGGATCATCGAC
GTGCTGTTCGAAGGCACGGTCAGCCAGGTGGCGGTGCGGCGCTCGGAATTCGGGTCCATCTTCCGGTCCAAGGGCCTGGA
CGGGCTGATCGAGACCCTGGAGAAGCAGACCGCGGCATTGGACAAGTAA

Upstream 100 bases:

>100_bases
GTACGGGGTGCGCTCTGGCTCCCCTTGGGGCAATATGGTATGGCAGTGGGCCGGCGGGCGTTCCAATCGGAAGGTCCCGG
ACTCTGGGGAGTAGGGTTGC

Downstream 100 bases:

>100_bases
CGCCATGATGTTCGTCTGGCAGGGCCTCTGTTTGGTCCTGATCGCATTGACGGTGGCGGGCTGCCTGTTCCAGGTGGCTT
CGGCCGCGCTGGTCCGGCGC

Product: ABC-type transport system involved in resistance to organic solvents, auxiliary component

Products: NA

Alternate protein names: Hopanoid Biosynthesis Associated Membrane Protein HpnM; Luene Tolerance; Luene Transport System Ttg2D Protein; Luene Transporter Auxiliary Component Ttg1D; Luene Tolerance Protein; Luene Tolerance Transporter

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRSFLAVSMLALVLWSGLAEPAAAQAGGPEAVIRTFSDRLLESMKGGAKLGFKGRAEKMRPAVAEAYDMPSMTRSTLGTA
ATKMSPDEAGKLAQAYSNFSVATYAAQFNEWNGERFEVGEQRPSAGGSVIVSSWLVPKNGDPTQIDYVMRQDQGQWRIID
VLFEGTVSQVAVRRSEFGSIFRSKGLDGLIETLEKQTAALDK

Sequences:

>Translated_202_residues
MRSFLAVSMLALVLWSGLAEPAAAQAGGPEAVIRTFSDRLLESMKGGAKLGFKGRAEKMRPAVAEAYDMPSMTRSTLGTA
ATKMSPDEAGKLAQAYSNFSVATYAAQFNEWNGERFEVGEQRPSAGGSVIVSSWLVPKNGDPTQIDYVMRQDQGQWRIID
VLFEGTVSQVAVRRSEFGSIFRSKGLDGLIETLEKQTAALDK
>Mature_202_residues
MRSFLAVSMLALVLWSGLAEPAAAQAGGPEAVIRTFSDRLLESMKGGAKLGFKGRAEKMRPAVAEAYDMPSMTRSTLGTA
ATKMSPDEAGKLAQAYSNFSVATYAAQFNEWNGERFEVGEQRPSAGGSVIVSSWLVPKNGDPTQIDYVMRQDQGQWRIID
VLFEGTVSQVAVRRSEFGSIFRSKGLDGLIETLEKQTAALDK

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21890; Mature: 21890

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFLAVSMLALVLWSGLAEPAAAQAGGPEAVIRTFSDRLLESMKGGAKLGFKGRAEKMR
CCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
PAVAEAYDMPSMTRSTLGTAATKMSPDEAGKLAQAYSNFSVATYAAQFNEWNGERFEVGE
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCC
QRPSAGGSVIVSSWLVPKNGDPTQIDYVMRQDQGQWRIIDVLFEGTVSQVAVRRSEFGSI
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
FRSKGLDGLIETLEKQTAALDK
HHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSFLAVSMLALVLWSGLAEPAAAQAGGPEAVIRTFSDRLLESMKGGAKLGFKGRAEKMR
CCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
PAVAEAYDMPSMTRSTLGTAATKMSPDEAGKLAQAYSNFSVATYAAQFNEWNGERFEVGE
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCC
QRPSAGGSVIVSSWLVPKNGDPTQIDYVMRQDQGQWRIIDVLFEGTVSQVAVRRSEFGSI
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
FRSKGLDGLIETLEKQTAALDK
HHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA