| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312555
Identifier: 83312555
GI number: 83312555
Start: 3792539
End: 3793630
Strand: Reverse
Name: 83312555
Synonym: amb3456
Alternate gene names: NA
Gene position: 3793630-3792539 (Counterclockwise)
Preceding gene: 83312556
Following gene: 83312554
Centisome position: 76.37
GC content: 71.7
Gene sequence:
>1092_bases ATGTCGGACAGACCGTTCCAGGATGAGATTCCTCCTCCCGCAGGTCGTCGGAATGACAGAGTCCTCATTCTCGTCGTCCT GCTGGCCATGGTTCTCGGCCTCGCCTCGCCGCCCGGTCGCCGGGCCTTCGACACCATCCGCCTGTTGGCCTCCCTGGGCG GCACGCCCGCATTCGTCGCCGCCCAAGCCGTGGCGTATCCGGGTGGAAGGGCCGATCTTTATGGCCAGTCCGGGCCGGTG CTCCTGCTGCTGCCCGGCGCCGCCGTGGCGGGCAAGGACGATCCCCGTCTGGTCCGCTTCGCCGCTGCCCTGGTGGGGGC GGGGTGGCGGGTGATGGTGCCCGATCTGCTGGGCGCCAAGGCGTTGACCCTGTCGGCCGCCGATGCCGCCGAGGTGGCCC AGGCGATCCGCCATGCGCCGGGAGACCGGGTCGCCCTGGCCGCCATCTCCTACGCCGCCATTCCGGCGGTGCTGGCGTCC CTGGAGCCGGAGGTGGCGGCCAAGGTGGCGGTGCTGGCGGCGGTGGGGCCGCCCTATGACGCGCGGCGCGTCATCGGCTT CTTCACCACTGGCTTCTGGCAGGGCCAAAGGCTGGAGCCCAACGCCTATGGCAAGTGGGTGTTCGTGCTGAGCAACGCCC GGCGCCTGACCGATACCGGCGACCGCACCCTGCTGGAAGCCATCGCCCGGCGGCGCATGGCCGATCTGGGGGTGGCGATC GATGATCTGACCCCTCGGCTGGGGCCGCAGGGCCGCGCCGTCATGGCGCTGCTCGACAACGAAGACCCCGGCCGCGTGGC GGATCTGCTGGACGGCCTGCCGCCGGGGATCGGGGACGAGATCGGCCGGCTCGACCTTGCCGCCCGCGATCTCTCGGGCT TCGGGCCGGAACTGCTGGTCATCCACGGAGCCGACGACCGCATCGTGCCGGTGGGCGAGGGCGAGTCCCTGGCGGCGGCG GTGCCCCATGGGCAATTCTATCGCCTGGGCAATCTGGCCCATGCCGATCTGACCGCCTCGGGCCTGGGCGACGGACTGAC CCTGGGCCGCGCGGTCTACCGCCTGCTGGAGTGGCGCGACCGGATGGGGTAG
Upstream 100 bases:
>100_bases AGGCCAAGCTGGGCGAGATCGAGGTGTGAGGCGGTCGGGCCTCGTTTGAGAGTGTCATCCCGAGCGAGAGCGAGGGATCT CCACCTGGAGCACCGTTTCA
Downstream 100 bases:
>100_bases AAGTCCGGCCATGAGCCATTCTTCCTCCGCCTTCGACGTGATCGTGATCGGTGCCGGTGCCGCCGGGCTGATGTGCGCCG CCGTGGCCGCCGGGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSDRPFQDEIPPPAGRRNDRVLILVVLLAMVLGLASPPGRRAFDTIRLLASLGGTPAFVAAQAVAYPGGRADLYGQSGPV LLLLPGAAVAGKDDPRLVRFAAALVGAGWRVMVPDLLGAKALTLSAADAAEVAQAIRHAPGDRVALAAISYAAIPAVLAS LEPEVAAKVAVLAAVGPPYDARRVIGFFTTGFWQGQRLEPNAYGKWVFVLSNARRLTDTGDRTLLEAIARRRMADLGVAI DDLTPRLGPQGRAVMALLDNEDPGRVADLLDGLPPGIGDEIGRLDLAARDLSGFGPELLVIHGADDRIVPVGEGESLAAA VPHGQFYRLGNLAHADLTASGLGDGLTLGRAVYRLLEWRDRMG
Sequences:
>Translated_363_residues MSDRPFQDEIPPPAGRRNDRVLILVVLLAMVLGLASPPGRRAFDTIRLLASLGGTPAFVAAQAVAYPGGRADLYGQSGPV LLLLPGAAVAGKDDPRLVRFAAALVGAGWRVMVPDLLGAKALTLSAADAAEVAQAIRHAPGDRVALAAISYAAIPAVLAS LEPEVAAKVAVLAAVGPPYDARRVIGFFTTGFWQGQRLEPNAYGKWVFVLSNARRLTDTGDRTLLEAIARRRMADLGVAI DDLTPRLGPQGRAVMALLDNEDPGRVADLLDGLPPGIGDEIGRLDLAARDLSGFGPELLVIHGADDRIVPVGEGESLAAA VPHGQFYRLGNLAHADLTASGLGDGLTLGRAVYRLLEWRDRMG >Mature_362_residues SDRPFQDEIPPPAGRRNDRVLILVVLLAMVLGLASPPGRRAFDTIRLLASLGGTPAFVAAQAVAYPGGRADLYGQSGPVL LLLPGAAVAGKDDPRLVRFAAALVGAGWRVMVPDLLGAKALTLSAADAAEVAQAIRHAPGDRVALAAISYAAIPAVLASL EPEVAAKVAVLAAVGPPYDARRVIGFFTTGFWQGQRLEPNAYGKWVFVLSNARRLTDTGDRTLLEAIARRRMADLGVAID DLTPRLGPQGRAVMALLDNEDPGRVADLLDGLPPGIGDEIGRLDLAARDLSGFGPELLVIHGADDRIVPVGEGESLAAAV PHGQFYRLGNLAHADLTASGLGDGLTLGRAVYRLLEWRDRMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38091; Mature: 37960
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRPFQDEIPPPAGRRNDRVLILVVLLAMVLGLASPPGRRAFDTIRLLASLGGTPAFVA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH AQAVAYPGGRADLYGQSGPVLLLLPGAAVAGKDDPRLVRFAAALVGAGWRVMVPDLLGAK HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHCCCC ALTLSAADAAEVAQAIRHAPGDRVALAAISYAAIPAVLASLEPEVAAKVAVLAAVGPPYD EEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCHH ARRVIGFFTTGFWQGQRLEPNAYGKWVFVLSNARRLTDTGDRTLLEAIARRRMADLGVAI HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCH DDLTPRLGPQGRAVMALLDNEDPGRVADLLDGLPPGIGDEIGRLDLAARDLSGFGPELLV HHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE IHGADDRIVPVGEGESLAAAVPHGQFYRLGNLAHADLTASGLGDGLTLGRAVYRLLEWRD EECCCCCEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RMG HCC >Mature Secondary Structure SDRPFQDEIPPPAGRRNDRVLILVVLLAMVLGLASPPGRRAFDTIRLLASLGGTPAFVA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH AQAVAYPGGRADLYGQSGPVLLLLPGAAVAGKDDPRLVRFAAALVGAGWRVMVPDLLGAK HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHCCCC ALTLSAADAAEVAQAIRHAPGDRVALAAISYAAIPAVLASLEPEVAAKVAVLAAVGPPYD EEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCHH ARRVIGFFTTGFWQGQRLEPNAYGKWVFVLSNARRLTDTGDRTLLEAIARRRMADLGVAI HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCH DDLTPRLGPQGRAVMALLDNEDPGRVADLLDGLPPGIGDEIGRLDLAARDLSGFGPELLV HHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE IHGADDRIVPVGEGESLAAAVPHGQFYRLGNLAHADLTASGLGDGLTLGRAVYRLLEWRD EECCCCCEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RMG HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA