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The map label for this gene is oprB [H]

Identifier: 83312543

GI number: 83312543

Start: 3776935

End: 3778356

Strand: Reverse

Name: oprB [H]

Synonym: amb3444

Alternate gene names: 83312543

Gene position: 3778356-3776935 (Counterclockwise)

Preceding gene: 83312554

Following gene: 83312541

Centisome position: 76.07

GC content: 67.44

Gene sequence:

>1422_bases
GTGGGTGGACCTGCGCCGCATCTTCGAAGGGTGGATTTTGCCATGAAGACAGGAATTTTCGTTGCCCGGCTGGCCGTCGC
CGCCGGTCTTGGCCTGGGATCGGCCGCCGCGTCGGCCGAGGAAGCCGAGGGTGCTCCCAAGGGCTTTTGGGAGCGCGAGA
CCCTGACCGGTGATTGGGGCGGCCTGCGCACCGACCTTGCCGAGAAGGGCGTCAAGGTGAACGCCGCCTACACGGCCGAA
ATGCTGGGCAACGCCTCGGGCGGCATCAAGCGTCGCGCCGTGGGCAATGCCCTGTTGCAGGTGGATGTGGATGCCGACCT
GGAACAGGCGGTGGGCTGGAAGGGTGGCGCCTTCCACGTTACCGGCCTGCACATTCAGGGCCGCCAGCTTTCCGCCAATT
TCATCGGCAACCTGATTCCGGTGCGCGACATCGAGGCGGCGCCTTCGACCCGGCTGTTCTCCCTGTGGCTGCAGCAGAGC
GTGCTCGACGACAAGGTGTCGCTGCGCTTCGGCCAGCTGCCCATGCAGGAGGAGTTCTTCAACTCCGTGGTCGCCACCAA
TCTGATCAATTCCGCCTTCGGCTGGCCGCCGGCCTTCGCCGCCAACCTGCCCTCGGGCGGCGGCGGCTATCCCCTGTCCA
ACCTGGGCACCCGCCTCAAGGTCCAGGCCACCGAGGACCTGGCGGTGCAGGCGGGCGTGTTCACGGGCAACGTGGCGCCC
GGCACCAATGTGGGCAACGACGCCCAGAAGCGGAACCGCAGCGGAATCGACTATACCGTCGACGAGGCGCCCATGTGGAT
GTTCGAGTCCCAGTACGGCCTGAACCAGGCCAAGGGCGCGGCGGGCCTGCCCACCATGTTCAAGCTGGGCGGCTGGTACT
ACAACGGCCGCGCCACCGACCAGCGCTATGACATTGCCGGCGTCTCGCTGGGCAGCAATGCCGCCGGCGCCGCCAAGACC
CATCGCGGCAACTGGGCCATCTACGGCATCTATGACGGCATGCTCTACAAGGAAGCCGGCACCGAGGATTTGGGCCTGTC
GGCCTTCCTGCGCGTCACCGGCCTGCCCGACGACCGCAACCAGATGCCGCTCTATGTCGACACCGGCCTCAGCTACAAGG
GGCCGCTGGAGGGCCGCGACGACGACGTGGTGGCCGTGGGCTTCGCCTTCGGCGCCATGAGCTCGTCCCTGGCCGCGCGC
GATGCCGATGCCCGGCGGTTCGGCACCGCCACCGCCCCGGACCACGATTACGAGGCGGCGGTGGAGCTGACCTACCGCTA
TCAGGTGACTCCCTGGATGACGCTGGTGCCCGACGCCCAATACGTCATCCATCCGGGCGGCACCACGACCCTGCCCGAGA
ACTCCCGCAAGACCATTCCGGACGCCACGGTGCTGGGCCTTCGGACGGTGTTCAAGCTGTAG

Upstream 100 bases:

>100_bases
CGAACCGGGAAGGCTGGGGCGCCGATCCTTTGACCCGCGAGCCAGGAGACCTGCCATCGCTGTCGCGTGCGCGCGCTTCC
CCGGGCGGGGTGTCCCGGAG

Downstream 100 bases:

>100_bases
GTTCTTGCGGATTCGCGAGGCGTCCATTATACCTTGCGGGCGGGATCCGACGGGGGGTGCCAACCCCTTGATTTTTAAGG
CCCCGCCCGCAACCAGGGCT

Product: carbohydrate-selective porin

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MGGPAPHLRRVDFAMKTGIFVARLAVAAGLGLGSAAASAEEAEGAPKGFWERETLTGDWGGLRTDLAEKGVKVNAAYTAE
MLGNASGGIKRRAVGNALLQVDVDADLEQAVGWKGGAFHVTGLHIQGRQLSANFIGNLIPVRDIEAAPSTRLFSLWLQQS
VLDDKVSLRFGQLPMQEEFFNSVVATNLINSAFGWPPAFAANLPSGGGGYPLSNLGTRLKVQATEDLAVQAGVFTGNVAP
GTNVGNDAQKRNRSGIDYTVDEAPMWMFESQYGLNQAKGAAGLPTMFKLGGWYYNGRATDQRYDIAGVSLGSNAAGAAKT
HRGNWAIYGIYDGMLYKEAGTEDLGLSAFLRVTGLPDDRNQMPLYVDTGLSYKGPLEGRDDDVVAVGFAFGAMSSSLAAR
DADARRFGTATAPDHDYEAAVELTYRYQVTPWMTLVPDAQYVIHPGGTTTLPENSRKTIPDATVLGLRTVFKL

Sequences:

>Translated_473_residues
MGGPAPHLRRVDFAMKTGIFVARLAVAAGLGLGSAAASAEEAEGAPKGFWERETLTGDWGGLRTDLAEKGVKVNAAYTAE
MLGNASGGIKRRAVGNALLQVDVDADLEQAVGWKGGAFHVTGLHIQGRQLSANFIGNLIPVRDIEAAPSTRLFSLWLQQS
VLDDKVSLRFGQLPMQEEFFNSVVATNLINSAFGWPPAFAANLPSGGGGYPLSNLGTRLKVQATEDLAVQAGVFTGNVAP
GTNVGNDAQKRNRSGIDYTVDEAPMWMFESQYGLNQAKGAAGLPTMFKLGGWYYNGRATDQRYDIAGVSLGSNAAGAAKT
HRGNWAIYGIYDGMLYKEAGTEDLGLSAFLRVTGLPDDRNQMPLYVDTGLSYKGPLEGRDDDVVAVGFAFGAMSSSLAAR
DADARRFGTATAPDHDYEAAVELTYRYQVTPWMTLVPDAQYVIHPGGTTTLPENSRKTIPDATVLGLRTVFKL
>Mature_472_residues
GGPAPHLRRVDFAMKTGIFVARLAVAAGLGLGSAAASAEEAEGAPKGFWERETLTGDWGGLRTDLAEKGVKVNAAYTAEM
LGNASGGIKRRAVGNALLQVDVDADLEQAVGWKGGAFHVTGLHIQGRQLSANFIGNLIPVRDIEAAPSTRLFSLWLQQSV
LDDKVSLRFGQLPMQEEFFNSVVATNLINSAFGWPPAFAANLPSGGGGYPLSNLGTRLKVQATEDLAVQAGVFTGNVAPG
TNVGNDAQKRNRSGIDYTVDEAPMWMFESQYGLNQAKGAAGLPTMFKLGGWYYNGRATDQRYDIAGVSLGSNAAGAAKTH
RGNWAIYGIYDGMLYKEAGTEDLGLSAFLRVTGLPDDRNQMPLYVDTGLSYKGPLEGRDDDVVAVGFAFGAMSSSLAARD
ADARRFGTATAPDHDYEAAVELTYRYQVTPWMTLVPDAQYVIHPGGTTTLPENSRKTIPDATVLGLRTVFKL

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 50424; Mature: 50293

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGPAPHLRRVDFAMKTGIFVARLAVAAGLGLGSAAASAEEAEGAPKGFWERETLTGDWG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCC
GLRTDLAEKGVKVNAAYTAEMLGNASGGIKRRAVGNALLQVDVDADLEQAVGWKGGAFHV
CHHHHHHHCCEEEEEEEEHHHHCCCCCCEEHHHHCCEEEEEECCCCHHHHCCCCCCEEEE
TGLHIQGRQLSANFIGNLIPVRDIEAAPSTRLFSLWLQQSVLDDKVSLRFGQLPMQEEFF
EEEEEECCEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCHHHHH
NSVVATNLINSAFGWPPAFAANLPSGGGGYPLSNLGTRLKVQATEDLAVQAGVFTGNVAP
HHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHCCCEEEEEECCCEEEEECEEECCCCC
GTNVGNDAQKRNRSGIDYTVDEAPMWMFESQYGLNQAKGAAGLPTMFKLGGWYYNGRATD
CCCCCCHHHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHCCCEEECCCCCC
QRYDIAGVSLGSNAAGAAKTHRGNWAIYGIYDGMLYKEAGTEDLGLSAFLRVTGLPDDRN
CEEEEEEEEECCCCCCCCEECCCCEEEEEEECCEEEECCCCCCCCCEEEEEEECCCCCCC
QMPLYVDTGLSYKGPLEGRDDDVVAVGFAFGAMSSSLAARDADARRFGTATAPDHDYEAA
CCCEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEE
VELTYRYQVTPWMTLVPDAQYVIHPGGTTTLPENSRKTIPDATVLGLRTVFKL
EEEEEEEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GGPAPHLRRVDFAMKTGIFVARLAVAAGLGLGSAAASAEEAEGAPKGFWERETLTGDWG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCC
GLRTDLAEKGVKVNAAYTAEMLGNASGGIKRRAVGNALLQVDVDADLEQAVGWKGGAFHV
CHHHHHHHCCEEEEEEEEHHHHCCCCCCEEHHHHCCEEEEEECCCCHHHHCCCCCCEEEE
TGLHIQGRQLSANFIGNLIPVRDIEAAPSTRLFSLWLQQSVLDDKVSLRFGQLPMQEEFF
EEEEEECCEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCHHHHH
NSVVATNLINSAFGWPPAFAANLPSGGGGYPLSNLGTRLKVQATEDLAVQAGVFTGNVAP
HHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHCCCEEEEEECCCEEEEECEEECCCCC
GTNVGNDAQKRNRSGIDYTVDEAPMWMFESQYGLNQAKGAAGLPTMFKLGGWYYNGRATD
CCCCCCHHHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHCCCEEECCCCCC
QRYDIAGVSLGSNAAGAAKTHRGNWAIYGIYDGMLYKEAGTEDLGLSAFLRVTGLPDDRN
CEEEEEEEEECCCCCCCCEECCCCEEEEEEECCEEEECCCCCCCCCEEEEEEECCCCCCC
QMPLYVDTGLSYKGPLEGRDDDVVAVGFAFGAMSSSLAARDADARRFGTATAPDHDYEAA
CCCEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEE
VELTYRYQVTPWMTLVPDAQYVIHPGGTTTLPENSRKTIPDATVLGLRTVFKL
EEEEEEEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]