| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312372
Identifier: 83312372
GI number: 83312372
Start: 3540326
End: 3541636
Strand: Reverse
Name: 83312372
Synonym: amb3273
Alternate gene names: NA
Gene position: 3541636-3540326 (Counterclockwise)
Preceding gene: 83312373
Following gene: 83312371
Centisome position: 71.3
GC content: 64.61
Gene sequence:
>1311_bases ATGAGCGACAACCCGCTCATCAACCTGCTGGGGCTGGAGGAGCACGCGAGGAAGGCGGCCAATTCCACCGAACTTGGCTT TGTCATGGTCAATGACAGCCGGGCACTGGCTTTCTATCGCCAAGCGGCGCTGTTCATCGACGGTGAAGGTCTGAAGGCGG TATCGGGAGTCGCCGGGATCGAGGCCGGGGCACCGTTTACCCTGTGGTTGGAGCGGGTGTTCAAGCGTCTGGCATCCGAT GATGTGCGCCAAGTCCGCCCCGCCGATCTTGATGGCGCCGATGGGGCAGAATGGTCGGAGTGGCTGCCTCGCCATGCCCT ACTACTGCCGTTGAAGGACCGCGACGGCCTGCGACTCGGAACCCTGCTGCTCGCCCGTGACGAGGATTGGGGCGAGCAGG ACATTGCCCTGCTCACCCGTGCTTCGGATTTCTACGGCCATGCTTGGGCCGTGCTGCACCGGCCCTCGCCGGTGACGGAA TGGAAGCGAAAAGTCACATCCATTCCTCGCTACCGGCTGAAGCTGGCGGCGGGAATCGTGCTGGCACTGCTGTTTCCGGT GCGCCTTTCGGTGCTGGCCCCGGCCGAGGTGGTGGCCCACAATCCGGCGGTGATCCGTTCGCCCATGGACGGCGTCATCG AGAAGGTGCATGTGCGGCCCAACCAGCCCGTAGGTGAGGGCGACATCCTGTTCGAACTGGATCGCACCACGCTCACCGGT AAGCTGGAGGTGGCAAAGAAAGCTCTGTCCACCGCTCAGGCTGAACTGGATCAGGCCACCCAGCAGGCATTCTTCGATTC CAAGGCCAAGGGGCAGCTTGCCATCATCCGTGCCCGCATCGAGGAGCGGAGCGCCGAGGCGGCGCAGTTGGAAGACTTGA TGGCCCGCTCCCAGGTCAAGGCGCCGCGCGCCGGTGTCGCCGTGCTGGATGATCCCGCCGAATGGCAGGGCCGCCCGGTC AACGTGGGCGAGAAGGTGCTGGCGGTGGCATCGCCCCATGACGTGGAGGTGGAGGCTTGGTTGGCCCCTGCCGATGTCAT CGCATTGGAGAAGGGTGACCCGGTCAGCCTGTTTCTCAATGCCGATCCGCTGTCGCCGGTATCGGCCCGGCTGCTTTATG TCACCTATGAAGCTATCCCCCAGCCCGACGGCACCCTGGGTCATCGGGTGCGGGCGGAATTGGCCAAAGGCGACAGCGGT CCCCGGTTGGGATTGAAAGGCACCGCCCGACTCGACGGCCATCGGGTGGCGTTGATCTACTGGCTGGCGCGGCGCCCGCT GGCGGTCGTGCGTAACTTTGTGGGTCTGTAG
Upstream 100 bases:
>100_bases TCGATGCGGTCAGCCATTCGGTCAAGGTGGTGGCCGAGGTCAAGGGCGACTATCCCGAACTGATCGCCGGTATGACAGGC CGGGTCCAAATGCCAGCGCC
Downstream 100 bases:
>100_bases CCATGGACGCAGCCGCCCTGCCATTGCCGGGTTTGCGCGATGAGCTATCGCTGCATCCGGGGCCGGCCAGCCTCGACGGC TCGCCCACCTGGACCATCCG
Product: membrane-fusion protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSDNPLINLLGLEEHARKAANSTELGFVMVNDSRALAFYRQAALFIDGEGLKAVSGVAGIEAGAPFTLWLERVFKRLASD DVRQVRPADLDGADGAEWSEWLPRHALLLPLKDRDGLRLGTLLLARDEDWGEQDIALLTRASDFYGHAWAVLHRPSPVTE WKRKVTSIPRYRLKLAAGIVLALLFPVRLSVLAPAEVVAHNPAVIRSPMDGVIEKVHVRPNQPVGEGDILFELDRTTLTG KLEVAKKALSTAQAELDQATQQAFFDSKAKGQLAIIRARIEERSAEAAQLEDLMARSQVKAPRAGVAVLDDPAEWQGRPV NVGEKVLAVASPHDVEVEAWLAPADVIALEKGDPVSLFLNADPLSPVSARLLYVTYEAIPQPDGTLGHRVRAELAKGDSG PRLGLKGTARLDGHRVALIYWLARRPLAVVRNFVGL
Sequences:
>Translated_436_residues MSDNPLINLLGLEEHARKAANSTELGFVMVNDSRALAFYRQAALFIDGEGLKAVSGVAGIEAGAPFTLWLERVFKRLASD DVRQVRPADLDGADGAEWSEWLPRHALLLPLKDRDGLRLGTLLLARDEDWGEQDIALLTRASDFYGHAWAVLHRPSPVTE WKRKVTSIPRYRLKLAAGIVLALLFPVRLSVLAPAEVVAHNPAVIRSPMDGVIEKVHVRPNQPVGEGDILFELDRTTLTG KLEVAKKALSTAQAELDQATQQAFFDSKAKGQLAIIRARIEERSAEAAQLEDLMARSQVKAPRAGVAVLDDPAEWQGRPV NVGEKVLAVASPHDVEVEAWLAPADVIALEKGDPVSLFLNADPLSPVSARLLYVTYEAIPQPDGTLGHRVRAELAKGDSG PRLGLKGTARLDGHRVALIYWLARRPLAVVRNFVGL >Mature_435_residues SDNPLINLLGLEEHARKAANSTELGFVMVNDSRALAFYRQAALFIDGEGLKAVSGVAGIEAGAPFTLWLERVFKRLASDD VRQVRPADLDGADGAEWSEWLPRHALLLPLKDRDGLRLGTLLLARDEDWGEQDIALLTRASDFYGHAWAVLHRPSPVTEW KRKVTSIPRYRLKLAAGIVLALLFPVRLSVLAPAEVVAHNPAVIRSPMDGVIEKVHVRPNQPVGEGDILFELDRTTLTGK LEVAKKALSTAQAELDQATQQAFFDSKAKGQLAIIRARIEERSAEAAQLEDLMARSQVKAPRAGVAVLDDPAEWQGRPVN VGEKVLAVASPHDVEVEAWLAPADVIALEKGDPVSLFLNADPLSPVSARLLYVTYEAIPQPDGTLGHRVRAELAKGDSGP RLGLKGTARLDGHRVALIYWLARRPLAVVRNFVGL
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47573; Mature: 47442
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNPLINLLGLEEHARKAANSTELGFVMVNDSRALAFYRQAALFIDGEGLKAVSGVAGI CCCCCEEEEECCHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCHHHHCCCCC EAGAPFTLWLERVFKRLASDDVRQVRPADLDGADGAEWSEWLPRHALLLPLKDRDGLRLG CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCEEE TLLLARDEDWGEQDIALLTRASDFYGHAWAVLHRPSPVTEWKRKVTSIPRYRLKLAAGIV EEEEEECCCCCCCHHEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHH LALLFPVRLSVLAPAEVVAHNPAVIRSPMDGVIEKVHVRPNQPVGEGDILFELDRTTLTG HHHHHHHHHHHCCCHHHHHCCCHHCCCCHHHHHHEEECCCCCCCCCCCEEEEECCCEEEH KLEVAKKALSTAQAELDQATQQAFFDSKAKGQLAIIRARIEERSAEAAQLEDLMARSQVK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHCC APRAGVAVLDDPAEWQGRPVNVGEKVLAVASPHDVEVEAWLAPADVIALEKGDPVSLFLN CCCCCEEEECCCHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEE ADPLSPVSARLLYVTYEAIPQPDGTLGHRVRAELAKGDSGPRLGLKGTARLDGHRVALIY CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEE WLARRPLAVVRNFVGL EHHHCCHHHHHHHHCC >Mature Secondary Structure SDNPLINLLGLEEHARKAANSTELGFVMVNDSRALAFYRQAALFIDGEGLKAVSGVAGI CCCCEEEEECCHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCHHHHCCCCC EAGAPFTLWLERVFKRLASDDVRQVRPADLDGADGAEWSEWLPRHALLLPLKDRDGLRLG CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCEEE TLLLARDEDWGEQDIALLTRASDFYGHAWAVLHRPSPVTEWKRKVTSIPRYRLKLAAGIV EEEEEECCCCCCCHHEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHH LALLFPVRLSVLAPAEVVAHNPAVIRSPMDGVIEKVHVRPNQPVGEGDILFELDRTTLTG HHHHHHHHHHHCCCHHHHHCCCHHCCCCHHHHHHEEECCCCCCCCCCCEEEEECCCEEEH KLEVAKKALSTAQAELDQATQQAFFDSKAKGQLAIIRARIEERSAEAAQLEDLMARSQVK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHCC APRAGVAVLDDPAEWQGRPVNVGEKVLAVASPHDVEVEAWLAPADVIALEKGDPVSLFLN CCCCCEEEECCCHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEE ADPLSPVSARLLYVTYEAIPQPDGTLGHRVRAELAKGDSGPRLGLKGTARLDGHRVALIY CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEE WLARRPLAVVRNFVGL EHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA