Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312371

Identifier: 83312371

GI number: 83312371

Start: 3538218

End: 3540323

Strand: Reverse

Name: 83312371

Synonym: amb3272

Alternate gene names: NA

Gene position: 3540323-3538218 (Counterclockwise)

Preceding gene: 83312372

Following gene: 83312370

Centisome position: 71.27

GC content: 64.1

Gene sequence:

>2106_bases
ATGGACGCAGCCGCCCTGCCATTGCCGGGTTTGCGCGATGAGCTATCGCTGCATCCGGGGCCGGCCAGCCTCGACGGCTC
GCCCACCTGGACCATCCGCGATCCGGTGCGAAACCGCTATTTCCGCATCGGCTGGGCCGCCTTCGAGGCGCTGAGCCGCT
GGGGTGGCACCGCCGGTGACGTCGCTAAGGCGGTGCGTTCTGAAACCACCATCGACATGAGTGATGAGGAGGTGGTGGAT
GTCGCCAAGTTCCTCCACGGCAACCAACTGACCCTGGCCAACAGCCATGCCGACACACTGCGGCTGGCCGAGCAGGCGGC
GACGGAAAAGCATTCCGTCTTCAACTGGCTGCTGCACCATTACCTGTTCTTCCGCATTCCGCTGGTGCGGCCCGACCGGT
TTCTGGGGGCCATGCTGCCGCTGATGTGCTGGCTGGGCAGCCAGTGGTTTCGTTGGACCAGTGCCGGGGCTTTGTTGCTC
GGGTTGATGCTGGTGGTGCGGCAATGGGAGGTCTTCACCGCCACCCTGGTCGATACCCTCTCGCTTTCCGGCATGGTCAG
CTACGGCATCGCCTTGTCATTTGTGAAGGTGATCCACGAACTGGCCCACGGCCTCACCGCCAAGCGCTACGGCTGTCGGG
TTCCCACCATGGGAATCGCCTTCCTGGTGATGTGGCCGGTGCTCTACACCGACGTCAACGAGACCTGGACCTTGGCGTCG
CGGCGTCAGCGCCTGCTGGTCGGCTCCGCTGGCATCCTGGCCGAACTCTCGGTGGCGGCCTGGGCCACGCTGCTCTGGGC
ATTCCTGCCCGACGGTGGCATGCGACAAGCGGTGTTTGTGCTGGCCGCCTTCACCTGGGTGTCGTCGCTGGCCATCAATC
TCAGCCCATTCATGCGATTCGATGGCTATTTCCTTGCCATGGACGCCCTGGAATTGCCCAACCTGCATCCGCGTTCCTTC
GCCATGGCCAAGTGGTGGCTACGGGAAGTGTTGTTCGATCTGGGCGAGCCACCGCCGGAAGCCATGAACCCAGGCCGCCA
GCGGGCCATGGTCGTCTTTGCTTTTGCCGTTTGGATTTACCGGCTGGTGTTGTTCCTCGGCATTGCCGCCCTGGTCTATC
ACTTCTTCATCAAGGCGGTGGGCGTTCTCCTGTTTGCCGTCGAGATCGGCTGGTTCGTGTTCCTGCCCATCTGGAACGAG
GTCAAGGAATGGGCCAAGCGCCGCGACGGTATTTTCAAGAACTCCCGCTGGAAGCGACCATTGCTGGGAATCGGCCTCGC
CTTGGTGGTCGCGGTCATCCCGTGGCGGACCCGGATTGAGGCTCCGGCCTCGGTCGCCGCCGAGATTATGGCGCCGCTAT
TCCTGCCCGCTCCGGCCCGGTTGGAAGCGGTGCTGGTCGAGCGCGGCCAGCATGTGGCGGCGGGAACAAAGTTGCTGGCC
TTCACCGCCCCCGATATCGATTCAAGGCGTGCCATCACCGCCGCCAAGCTGGCGGGAAAATCAGCCGAGTTGGAGGCGGT
CAAGCTCGATCCCTTCGGGCGGGAACGCCTGTCGGCCCTGACCGAGGAACTATCGCGGCTTGGGTCTGAGAAGGCGGCCC
TGGATGCCGAGGCCGAACGTCTGACCATTACCTCGCCCCATGCCGGGATCTTCCTTGATCCACTGCCGGATCTGAAGCCC
GGCGCTTGGCTGTCGCCCAAGCAGCAATTGGGTCTGATCCGTGTTGATGGTTCGACCATCGCCACCGCCTATGTGGCCGA
GGATGACCTGGAGAGGATCAAGCCGGGCGACACCGCCCGTTTCATCCCCAACGGCCTCGACCATGTCGGTATGACCGGCA
CGGTGCTGGCCATCGACCGTAATCCGATCAAGGTGCTGACCGATCCGGCCCTGGCCTCGCTCCATGGCGGCGACATCCCC
GTGCGGGTATCGGGCCAGATTCTGGTGCCCCAGGGAAGCTTCTTCCGCGTTACCATCCGTCTGGATGGCACGGCCCCCAA
CCTCAAGCTGATCGGCCATGTCCAGATCAGCGGCCAGGGCCAAAGCCTGATTGGCCGCGCCGCCCGCTCGGCCCTGGTGG
TGCTGGTCCGGGAGTGGGGCGCATAA

Upstream 100 bases:

>100_bases
TGAAAGGCACCGCCCGACTCGACGGCCATCGGGTGGCGTTGATCTACTGGCTGGCGCGGCGCCCGCTGGCGGTCGTGCGT
AACTTTGTGGGTCTGTAGCC

Downstream 100 bases:

>100_bases
TCATCAACCCAGTGAAGGAGATCGACATGAAGATCAAGCAAACCCTGATGGTGATGATGGTGGCGGCCATGCTGACCCCT
GCACCAATAGCCCTGGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: M50 Family Peptidase; Peptidase; Membrane-Fusion Protein; Peptidase Family M; HlyD Domain-Containing Protein; Transmembrane Protein; Membrane-Fusion Domain; Zinc Metallopeptidase; Secretion Protein HlyD Family Protein; Membrane Zinc Metallopeptidase; Membrane-Fusion Protein Contains Peptidase Family; Zinc Metallopeptidase Family Protein; Integral Membrane Protein; Zn-Dependent Protease

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGDVAKAVRSETTIDMSDEEVVD
VAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHHYLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLL
GLMLVVRQWEVFTATLVDTLSLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS
RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNLHPRSF
AMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNE
VKEWAKRRDGIFKNSRWKRPLLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA
FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLDPLPDLKP
GAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIP
VRVSGQILVPQGSFFRVTIRLDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA

Sequences:

>Translated_701_residues
MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGDVAKAVRSETTIDMSDEEVVD
VAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHHYLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLL
GLMLVVRQWEVFTATLVDTLSLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS
RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNLHPRSF
AMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNE
VKEWAKRRDGIFKNSRWKRPLLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA
FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLDPLPDLKP
GAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIP
VRVSGQILVPQGSFFRVTIRLDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA
>Mature_701_residues
MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGDVAKAVRSETTIDMSDEEVVD
VAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHHYLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLL
GLMLVVRQWEVFTATLVDTLSLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS
RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNLHPRSF
AMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNE
VKEWAKRRDGIFKNSRWKRPLLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA
FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLDPLPDLKP
GAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIP
VRVSGQILVPQGSFFRVTIRLDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77105; Mature: 77105

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGD
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCHHHCCEEEEHHHHHHHHHHCCCCHHH
VAKAVRSETTIDMSDEEVVDVAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHH
HHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
YLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLLGLMLVVRQWEVFTATLVDTL
HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRF
HHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC
DGYFLAMDALELPNLHPRSFAMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIY
CCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHH
RLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNEVKEWAKRRDGIFKNSRWKRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCC
LLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA
HHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCEEEE
FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAER
EECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCE
LTITSPHAGIFLDPLPDLKPGAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTAR
EEEECCCCCEEECCCCCCCCCCCCCCHHHCCEEEECCCEEEEEEECHHHHHHCCCCCCCC
FIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIPVRVSGQILVPQGSFFRVTIR
CCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCCCCCEEEECCEEEECCCCEEEEEEE
LDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA
ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGD
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCHHHCCEEEEHHHHHHHHHHCCCCHHH
VAKAVRSETTIDMSDEEVVDVAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHH
HHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
YLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLLGLMLVVRQWEVFTATLVDTL
HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRF
HHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC
DGYFLAMDALELPNLHPRSFAMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIY
CCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHH
RLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNEVKEWAKRRDGIFKNSRWKRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCC
LLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA
HHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCEEEE
FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAER
EECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCE
LTITSPHAGIFLDPLPDLKPGAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTAR
EEEECCCCCEEECCCCCCCCCCCCCCHHHCCEEEECCCEEEEEEECHHHHHHCCCCCCCC
FIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIPVRVSGQILVPQGSFFRVTIR
CCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCCCCCEEEECCEEEECCCCEEEEEEE
LDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA
ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA