| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is hisZ
Identifier: 83312290
GI number: 83312290
Start: 3456822
End: 3457913
Strand: Reverse
Name: hisZ
Synonym: amb3191
Alternate gene names: 83312290
Gene position: 3457913-3456822 (Counterclockwise)
Preceding gene: 83312291
Following gene: 83312289
Centisome position: 69.62
GC content: 71.25
Gene sequence:
>1092_bases ATGCTGCCCCCAGACGCGGAGTTCGAAGCCTCCGTCGTCCACAGCCTGATGAGCATGTTCGCCCGTCATGGCTATGATCG TGTCAAGCCGCCGCTGATCGAATTCGAGGAAAGCCTGCTGGACGGCGCGGGGGGGGGGACCTCGTCCCAGACCTTCCGGG TCATGGATCCCATGAGCCAGAAGATGATGGGCCTGCGCGCCGACATGACGCCGCAGGTGGCCCGCATCGCCGCCACCCGC CTGGGATCCCAGCCCCGGCCGCTGCGCCTGTCCTATGCCGGTCAGGTGCTGCGGGTGAAGGGCACCCAGCTGCGCCCCGA GCGGCAGTTCGGCCAGGCCGGAATCGAGCTGATCGGCTCGGATGATGCCGGCGCCGATGCCGAGGTCCTGGTGATGACCG CCGAGGCGCTCGATGATCTCGGCGTGCCCGGGGTGTCCGCCGACCTGGCCCTGCCCACCCTGGTTCCGGCGGTGTTCGCC GCCTATGGGATCAATGGCGAGACCGCCGATCGCCTGCGCGCCGCCCTCGACCACAAGGACAGCGCCACGGTTGCCGCCCA GGGCGGAGCCGCCGCGCCGCTGCTGCAGGCGCTGATCGCCGCCGCCGGTCCGGCCGCCCGCGCCCTGGCCGAGCTGTGCG CCCTGGACCTGCCCCCCGCCGCCGCCGCCGAGCGCGACCGTCTGGCCCGGGTGGTGGAACTGGCCGGTGCCGACCTGCCG TCGCTGACCCTGACGGTCGATCCGGTGGAAAATCGCGGATTCGAGTATCATACCGGCCTCAGCTTCACCCTGTTCGCCCG CAATATGGGTGCCGAACTGGGGCGCGGCGGGCGCTATCAGGGCGGAGGCGGCGAGCCGGCCACCGGCGCCACTCTGTTCA TGGATTCCGTTCTGGCGGCGCTGCCCGGCCCCAAGCCGGCCAAGCGGCTGTTCGTTCCGGCGGGAACGCCCCGGGCCTGG GCCCAGGCGTTCCGCGCCCAGGGCTGGGTGACGGTGTCGGGGCTGGACCCCGCCGCCGACCCGCAAGTGGAAGCAAAGCA TCAGGGCTGCAGGCATCGCCTCGGTCCCGATGGTATCGTCGAAGTCGAATAG
Upstream 100 bases:
>100_bases GAGCGGTCGTCATTGCGACGCCCGCCCTTGTTCCGGGTTGCGACACCAAGAGATGACCGAGTCCGCCAATCGGGCCCTGC TGCCCGCCGGCCTGCGCGAC
Downstream 100 bases:
>100_bases GTTAGGGGACTTAAAGGTATGGCGAACGTGGCTGTGGTCGGCGCCCAGTGGGGCGACGAGGGCAAGGGCAAGGTCGTCGA TTGGCTCTCCGAGCGCGCCG
Product: ATP phosphoribosyltransferase
Products: AMP; diphosphate; L-histidyl-tRNA(His)
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGGTSSQTFRVMDPMSQKMMGLRADMTPQVARIAATR LGSQPRPLRLSYAGQVLRVKGTQLRPERQFGQAGIELIGSDDAGADAEVLVMTAEALDDLGVPGVSADLALPTLVPAVFA AYGINGETADRLRAALDHKDSATVAAQGGAAAPLLQALIAAAGPAARALAELCALDLPPAAAAERDRLARVVELAGADLP SLTLTVDPVENRGFEYHTGLSFTLFARNMGAELGRGGRYQGGGGEPATGATLFMDSVLAALPGPKPAKRLFVPAGTPRAW AQAFRAQGWVTVSGLDPAADPQVEAKHQGCRHRLGPDGIVEVE
Sequences:
>Translated_363_residues MLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGGTSSQTFRVMDPMSQKMMGLRADMTPQVARIAATR LGSQPRPLRLSYAGQVLRVKGTQLRPERQFGQAGIELIGSDDAGADAEVLVMTAEALDDLGVPGVSADLALPTLVPAVFA AYGINGETADRLRAALDHKDSATVAAQGGAAAPLLQALIAAAGPAARALAELCALDLPPAAAAERDRLARVVELAGADLP SLTLTVDPVENRGFEYHTGLSFTLFARNMGAELGRGGRYQGGGGEPATGATLFMDSVLAALPGPKPAKRLFVPAGTPRAW AQAFRAQGWVTVSGLDPAADPQVEAKHQGCRHRLGPDGIVEVE >Mature_363_residues MLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGGTSSQTFRVMDPMSQKMMGLRADMTPQVARIAATR LGSQPRPLRLSYAGQVLRVKGTQLRPERQFGQAGIELIGSDDAGADAEVLVMTAEALDDLGVPGVSADLALPTLVPAVFA AYGINGETADRLRAALDHKDSATVAAQGGAAAPLLQALIAAAGPAARALAELCALDLPPAAAAERDRLARVVELAGADLP SLTLTVDPVENRGFEYHTGLSFTLFARNMGAELGRGGRYQGGGGEPATGATLFMDSVLAALPGPKPAKRLFVPAGTPRAW AQAFRAQGWVTVSGLDPAADPQVEAKHQGCRHRLGPDGIVEVE
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISZ_MAGSA (Q2W2D0)
Other databases:
- EMBL: AP007255 - RefSeq: YP_422554.1 - ProteinModelPortal: Q2W2D0 - STRING: Q2W2D0 - GeneID: 3806316 - GenomeReviews: AP007255_GR - KEGG: mag:amb3191 - NMPDR: fig|342108.5.peg.2862 - eggNOG: COG3705 - HOGENOM: HBG616575 - OMA: DLRGYHY - ProtClustDB: CLSK933083 - BioCyc: MMAG342108:AMB3191-MONOMER - GO: GO:0005737 - HAMAP: MF_00125 - InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004516 - PANTHER: PTHR11476 - PIRSF: PIRSF001549
Pfam domain/function: PF00587 tRNA-synt_2b
EC number: 6.1.1.21
Molecular weight: Translated: 37916; Mature: 37916
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGGTSSQTFRVMDPMSQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCHHHH KMMGLRADMTPQVARIAATRLGSQPRPLRLSYAGQVLRVKGTQLRPERQFGQAGIELIGS HHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCHHHHCCCCEEEEEC DDAGADAEVLVMTAEALDDLGVPGVSADLALPTLVPAVFAAYGINGETADRLRAALDHKD CCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC SATVAAQGGAAAPLLQALIAAAGPAARALAELCALDLPPAAAAERDRLARVVELAGADLP CCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC SLTLTVDPVENRGFEYHTGLSFTLFARNMGAELGRGGRYQGGGGEPATGATLFMDSVLAA CEEEEECCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LPGPKPAKRLFVPAGTPRAWAQAFRAQGWVTVSGLDPAADPQVEAKHQGCRHRLGPDGIV CCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEE EVE ECC >Mature Secondary Structure MLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGGTSSQTFRVMDPMSQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCHHHH KMMGLRADMTPQVARIAATRLGSQPRPLRLSYAGQVLRVKGTQLRPERQFGQAGIELIGS HHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCHHHHCCCCEEEEEC DDAGADAEVLVMTAEALDDLGVPGVSADLALPTLVPAVFAAYGINGETADRLRAALDHKD CCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC SATVAAQGGAAAPLLQALIAAAGPAARALAELCALDLPPAAAAERDRLARVVELAGADLP CCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC SLTLTVDPVENRGFEYHTGLSFTLFARNMGAELGRGGRYQGGGGEPATGATLFMDSVLAA CEEEEECCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LPGPKPAKRLFVPAGTPRAWAQAFRAQGWVTVSGLDPAADPQVEAKHQGCRHRLGPDGIV CCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEE EVE ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine; tRNA(His)
Specific reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA