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The map label for this gene is bioC [C]

Identifier: 83312205

GI number: 83312205

Start: 3361679

End: 3362863

Strand: Reverse

Name: bioC [C]

Synonym: amb3106

Alternate gene names: 83312205

Gene position: 3362863-3361679 (Counterclockwise)

Preceding gene: 83312206

Following gene: 83312201

Centisome position: 67.7

GC content: 61.94

Gene sequence:

>1185_bases
TTGGGGTGGCTTCTTTTCGATGACAGGAGGAATTTGCCGGTTTACATTTGGTTCACAATGGCGGCGATGGGTGGCCTGAT
GACGTTAACGGAAGCCATACAGTCCGCTCTGGAGCTTGTCGCGCAGGACGATATCGATGGGGCTCTGAGGGCCTTCGACC
GGATCGAAGCGTCTGTCCCCGGCGACGCCACAGTCTTGCGTCTGAGGGCGCAAACCTATCTGAAGGTCGGCCAGTACGCC
GAAGCCGCCCGCATTCTATTTGGGCTGGTCCGGGCCGATCCCAAGGTCGACCCGATCTTTGATCTTGTTTGGGCTTTGGT
CCATGCGCGCGCCTATGTGGACATCGTCGGGGTTTGCGCCGAGTACAAGCATGTCATCGCCGGAGACAAACGCTTTCTGG
CGGCTTTGGGGATGGCTCAGACGGCGCTTGGGCGCTATCAGGACGCGTTGGCGACCCTGAGCCAGGCCCGCGAGGTGCTC
CCCCGCGATTTCTATGTTCGTCACAATCTCTCGATCGCCTTGCTCCATCTGGGGCGCCATGAAGAGGCGGTGGAGGTTTT
CTCGGAACTGCTGCCCGATTGGGATGGTAGCGCCCCCGACGGCGTGACACTGGAGCGGCTGGATGCCATTTCGGTGGGAT
ATGACGATAATGAGCTGCACAACTACTTCAGCGATCGTCTTCTCAGGCTGTACCAGGGGCACTTTCCCGCCCGGCGGATG
AGGCGGGTGCTGGAAATGGGCACGGGAACCGGATTGCTGGCTTCCAAGCTGCCGGCCTCTACCACTTCGGTGACCGGGAT
CGAGCGCTCGCCGGGCATGCTGGCGCAGGCGCGGGCCCGCAAGGTCTATGATACCTTGATCGAGGGCGAGATGCCGGGGG
GGCTGGCAAGCATCGAAGGTCCGTTCGAGACCATTCTGTCGTCTTGCGTGCTGTACTACTTCGCCGATCTTGAGCCGTTC
TTCCGCGAAGCGTCACGCCTGACGGAGCCGGGCGGAGTCTTTGTGTTTTCCGTGGACCCCCTATGCGACCCGCGAGAGGT
GGCGGCGACCGTGCCGGGCGAGTATGCCCATAGCCGGTCCTATCTTCGCCGACTGGCGACCGAGGCGGGGTTTCGGGAGG
TGGCCATGGAGATCGATCGTCATCGTGGCCCTCCTGGCTTCTGGTGCGCCTTCAAGAGGGGGTGA

Upstream 100 bases:

>100_bases
CACCGCCGACAAGAAGGCGGATGCTGACGAGGAGTAAATCTCCGCTTCGGTTGCATAGACTTTAGGAAGGGGCCGTCCCG
CGAGGGGCGGCCCCTTTCGC

Downstream 100 bases:

>100_bases
TCAGATCCCGGAAGCGGGCGGCGGCGTCGATGTCGCCCCGAAGCTCGGCGCGGCGGTCGGCGGCTTCCCAGTCCTCGCCC
CACAATTCGATCTGGTACGT

Product: methyltransferase

Products: NA

Alternate protein names: Methyltransferase; TPR Repeat-Containing Protein; SAM-Dependent Methyltransferases; Methyltransferase Domain Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MGWLLFDDRRNLPVYIWFTMAAMGGLMTLTEAIQSALELVAQDDIDGALRAFDRIEASVPGDATVLRLRAQTYLKVGQYA
EAARILFGLVRADPKVDPIFDLVWALVHARAYVDIVGVCAEYKHVIAGDKRFLAALGMAQTALGRYQDALATLSQAREVL
PRDFYVRHNLSIALLHLGRHEEAVEVFSELLPDWDGSAPDGVTLERLDAISVGYDDNELHNYFSDRLLRLYQGHFPARRM
RRVLEMGTGTGLLASKLPASTTSVTGIERSPGMLAQARARKVYDTLIEGEMPGGLASIEGPFETILSSCVLYYFADLEPF
FREASRLTEPGGVFVFSVDPLCDPREVAATVPGEYAHSRSYLRRLATEAGFREVAMEIDRHRGPPGFWCAFKRG

Sequences:

>Translated_394_residues
MGWLLFDDRRNLPVYIWFTMAAMGGLMTLTEAIQSALELVAQDDIDGALRAFDRIEASVPGDATVLRLRAQTYLKVGQYA
EAARILFGLVRADPKVDPIFDLVWALVHARAYVDIVGVCAEYKHVIAGDKRFLAALGMAQTALGRYQDALATLSQAREVL
PRDFYVRHNLSIALLHLGRHEEAVEVFSELLPDWDGSAPDGVTLERLDAISVGYDDNELHNYFSDRLLRLYQGHFPARRM
RRVLEMGTGTGLLASKLPASTTSVTGIERSPGMLAQARARKVYDTLIEGEMPGGLASIEGPFETILSSCVLYYFADLEPF
FREASRLTEPGGVFVFSVDPLCDPREVAATVPGEYAHSRSYLRRLATEAGFREVAMEIDRHRGPPGFWCAFKRG
>Mature_393_residues
GWLLFDDRRNLPVYIWFTMAAMGGLMTLTEAIQSALELVAQDDIDGALRAFDRIEASVPGDATVLRLRAQTYLKVGQYAE
AARILFGLVRADPKVDPIFDLVWALVHARAYVDIVGVCAEYKHVIAGDKRFLAALGMAQTALGRYQDALATLSQAREVLP
RDFYVRHNLSIALLHLGRHEEAVEVFSELLPDWDGSAPDGVTLERLDAISVGYDDNELHNYFSDRLLRLYQGHFPARRMR
RVLEMGTGTGLLASKLPASTTSVTGIERSPGMLAQARARKVYDTLIEGEMPGGLASIEGPFETILSSCVLYYFADLEPFF
REASRLTEPGGVFVFSVDPLCDPREVAATVPGEYAHSRSYLRRLATEAGFREVAMEIDRHRGPPGFWCAFKRG

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG4976

COG function: function code R; Predicted methyltransferase (contains TPR repeat)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43781; Mature: 43649

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWLLFDDRRNLPVYIWFTMAAMGGLMTLTEAIQSALELVAQDDIDGALRAFDRIEASVP
CCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
GDATVLRLRAQTYLKVGQYAEAARILFGLVRADPKVDPIFDLVWALVHARAYVDIVGVCA
CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EYKHVIAGDKRFLAALGMAQTALGRYQDALATLSQAREVLPRDFYVRHNLSIALLHLGRH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEECCCC
EEAVEVFSELLPDWDGSAPDGVTLERLDAISVGYDDNELHNYFSDRLLRLYQGHFPARRM
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCHHHH
RRVLEMGTGTGLLASKLPASTTSVTGIERSPGMLAQARARKVYDTLIEGEMPGGLASIEG
HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PFETILSSCVLYYFADLEPFFREASRLTEPGGVFVFSVDPLCDPREVAATVPGEYAHSRS
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHH
YLRRLATEAGFREVAMEIDRHRGPPGFWCAFKRG
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
GWLLFDDRRNLPVYIWFTMAAMGGLMTLTEAIQSALELVAQDDIDGALRAFDRIEASVP
CCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
GDATVLRLRAQTYLKVGQYAEAARILFGLVRADPKVDPIFDLVWALVHARAYVDIVGVCA
CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EYKHVIAGDKRFLAALGMAQTALGRYQDALATLSQAREVLPRDFYVRHNLSIALLHLGRH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEECCCC
EEAVEVFSELLPDWDGSAPDGVTLERLDAISVGYDDNELHNYFSDRLLRLYQGHFPARRM
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCHHHH
RRVLEMGTGTGLLASKLPASTTSVTGIERSPGMLAQARARKVYDTLIEGEMPGGLASIEG
HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PFETILSSCVLYYFADLEPFFREASRLTEPGGVFVFSVDPLCDPREVAATVPGEYAHSRS
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHH
YLRRLATEAGFREVAMEIDRHRGPPGFWCAFKRG
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA