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The map label for this gene is ygiQ [C]

Identifier: 83312196

GI number: 83312196

Start: 3347135

End: 3349141

Strand: Reverse

Name: ygiQ [C]

Synonym: amb3097

Alternate gene names: 83312196

Gene position: 3349141-3347135 (Counterclockwise)

Preceding gene: 83312197

Following gene: 83312190

Centisome position: 67.43

GC content: 67.51

Gene sequence:

>2007_bases
ATGACACCAGTTCAGCCCCTTTCCTTTCCCCGCCGTGGCGCGGCGCCCTTCCTGCCCATGAGCCGGGCCGAGATGGAGAC
GCTCGGCTGGGACCAGTGCGACGTGGTGCTGGTCACCGGCGACGCCTATGTGGACCATCCCAGCTTCGGCATGGCCATCG
TCGGCCGGCTGCTGGAATCCCAGGGCTTCAAGGTGGGCATCATCGCCCAACCCGACTGGAGCGGGCCCGAGCCCTTCCGC
GCCCTGGGCCGTCCGCGCCTATTCTTCGGGGTGACGGCGGGCAACATGGATTCCATGGTCAACCGCTATACCTCGGACCG
CCGCCTGCGCAGCGACGACAGCTATACGCCGGGCGGCGAGGGCGGCAAGCGCCCCGACCGCGCCGTCATCGTCTATGCCC
AGCGCTGCCGCGAGGCCTTCAAGGACGTTCCCGTGGTGCTGGGCGGCATCGAGGCGTCCTTGCGCCGCATCGCCCATTTC
GACATCTGGTCGGAAAAGCTGCGCCGTTCGGTGCTGTTGGATGCCAAGGCCGATCTGCTGGTGTTCGGCAACGCCGAGCG
GGCCATCGTCGACATCGCCCGGCGGAGCGCGGCGGGCGAGGCGCCCAGGGAGATGCACGACATCCGGGGCACGGTCTTCG
TGCGTCCCGGGGTGCCCGAGGACTGGCGGGTGGTGGATGCCTCGGACCTGGAGACCGCTCCGCCGGCCCTGAAGGGCGAC
AAGGTGGTGGTGCGCCTGCCTTCCTTCGAGCAAGTGCAGGACGATCCGGTGCTGTACGCCCAGGCGTCGCGAGTGCTGCA
CCAGGAGAGCAACCCCCTCAACGCCCGGCCGCTGGTTCAGCGCCACGGCGACAGGGAACTGTGGGTGACCGAGCCGCCCA
TTCCGCTCTCCACTCCCGAACTGGACGGGGTCTACGACCTGCCCTATGCAAGGGGGCCGCATCCCTCCTATGGCGAGGCC
AAGATCCCCGCCTGGGAGATGATCCGCTTTTCCATCAACATCGTGCGCGGCTGTTTCGGCGGCTGTTCCTTCTGCTCCAT
CACCGAGCACGAGGGCCGCATTATCCAGAGCCGCTCGGCCGATTCCATCATCCACGAGATCGAGGAGATCCGGGACAAGA
CCAAGGGCTTTACCGGCACCATCTCGGATCTGGGCGGGCCGACCGCCAATATGTGGCGGCTGGGCTGCCGCGAGCCCGAG
GTGCAGAAGGTCTGCCGCCGCCTGTCCTGCGTCTATCCCGACATCTGCAAGACGCTGGGCACCGACCATGATCCGCTGAT
CCGTCTTTACCGCGCAGCAAGGGGCGTCAAGGGCGTCAAGCGGGTCAATATCGGCTCGGGCGTGCGCTACGATCTGGCGG
TGACCAGTCCGGCCTATGTGGACGAACTGGTGCGCCACCATGTGGGCGGCTATCTCAAGATCGCCCCCGAGCATACCGAA
GACGGGCCGCTGTCCAAGATGATGAAGCCGGGCATCGGCTCCTACGAGCGCTTCAAGGACATGTTCGAGAAGGCGGCGGT
CAAGGCGGGCAAGAAGCTCTACCTCATCCCCTATTTCATCGCCGCCCATCCCGGCACCAGCGACCAGGACATGCTGAACC
TGGCCCTGTGGCTGAAGAAGAACGGCTTCAGGCTCGATCAGGTGCAGACCTTCCTGCCGACCCCCATGTCGCTGGCCACC
GCCATGTATCACAGCGGCCGCGACCCCATCCGGCCGGTGCGCCGCGTGGGCGAGGAGGTGTTCACCGCCAAGGGCCTGCG
CCAGCGGCGCCTGCACAAGGCCTTCCTGCGCTGGCACGATCCCGAGAACTGGCCGATCCTGCGCGAGGCGCTGCAGAAGA
TGGGCCGCGCCGACCTGATCGGGCCGGGGAATCATCAGTTGGTGCCGCGCGGCGGGGCTGCTGCCGCTCAAGCGGTGGGC
GCCAAACCTGGCGCACGCCGCGATCAGCCGCCATTGAGGCGGCGGCCAAGCGGCCGGAAGGCCGCGCCCGGCGAGGGGCG
GACATAA

Upstream 100 bases:

>100_bases
GCGGCGCGCCGCGTGCTGGCGAAATGGGTGTTGCATCTGAATGGCAAAGGGGAGGATGACAGGGGATACCGAGACGGCGA
CGGCATTTGATTTCCTGATC

Downstream 100 bases:

>100_bases
CCCTACCTCGCGACGCACGCCGCGGGGAAATAGACGCTGACCGTGGTGCCTTCGCCCGGCGTGGAAATGATCTCCAGGCT
GCCGCCATGCAGCTCGGCCA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 667

Protein sequence:

>668_residues
MTPVQPLSFPRRGAAPFLPMSRAEMETLGWDQCDVVLVTGDAYVDHPSFGMAIVGRLLESQGFKVGIIAQPDWSGPEPFR
ALGRPRLFFGVTAGNMDSMVNRYTSDRRLRSDDSYTPGGEGGKRPDRAVIVYAQRCREAFKDVPVVLGGIEASLRRIAHF
DIWSEKLRRSVLLDAKADLLVFGNAERAIVDIARRSAAGEAPREMHDIRGTVFVRPGVPEDWRVVDASDLETAPPALKGD
KVVVRLPSFEQVQDDPVLYAQASRVLHQESNPLNARPLVQRHGDRELWVTEPPIPLSTPELDGVYDLPYARGPHPSYGEA
KIPAWEMIRFSINIVRGCFGGCSFCSITEHEGRIIQSRSADSIIHEIEEIRDKTKGFTGTISDLGGPTANMWRLGCREPE
VQKVCRRLSCVYPDICKTLGTDHDPLIRLYRAARGVKGVKRVNIGSGVRYDLAVTSPAYVDELVRHHVGGYLKIAPEHTE
DGPLSKMMKPGIGSYERFKDMFEKAAVKAGKKLYLIPYFIAAHPGTSDQDMLNLALWLKKNGFRLDQVQTFLPTPMSLAT
AMYHSGRDPIRPVRRVGEEVFTAKGLRQRRLHKAFLRWHDPENWPILREALQKMGRADLIGPGNHQLVPRGGAAAAQAVG
AKPGARRDQPPLRRRPSGRKAAPGEGRT

Sequences:

>Translated_668_residues
MTPVQPLSFPRRGAAPFLPMSRAEMETLGWDQCDVVLVTGDAYVDHPSFGMAIVGRLLESQGFKVGIIAQPDWSGPEPFR
ALGRPRLFFGVTAGNMDSMVNRYTSDRRLRSDDSYTPGGEGGKRPDRAVIVYAQRCREAFKDVPVVLGGIEASLRRIAHF
DIWSEKLRRSVLLDAKADLLVFGNAERAIVDIARRSAAGEAPREMHDIRGTVFVRPGVPEDWRVVDASDLETAPPALKGD
KVVVRLPSFEQVQDDPVLYAQASRVLHQESNPLNARPLVQRHGDRELWVTEPPIPLSTPELDGVYDLPYARGPHPSYGEA
KIPAWEMIRFSINIVRGCFGGCSFCSITEHEGRIIQSRSADSIIHEIEEIRDKTKGFTGTISDLGGPTANMWRLGCREPE
VQKVCRRLSCVYPDICKTLGTDHDPLIRLYRAARGVKGVKRVNIGSGVRYDLAVTSPAYVDELVRHHVGGYLKIAPEHTE
DGPLSKMMKPGIGSYERFKDMFEKAAVKAGKKLYLIPYFIAAHPGTSDQDMLNLALWLKKNGFRLDQVQTFLPTPMSLAT
AMYHSGRDPIRPVRRVGEEVFTAKGLRQRRLHKAFLRWHDPENWPILREALQKMGRADLIGPGNHQLVPRGGAAAAQAVG
AKPGARRDQPPLRRRPSGRKAAPGEGRT
>Mature_667_residues
TPVQPLSFPRRGAAPFLPMSRAEMETLGWDQCDVVLVTGDAYVDHPSFGMAIVGRLLESQGFKVGIIAQPDWSGPEPFRA
LGRPRLFFGVTAGNMDSMVNRYTSDRRLRSDDSYTPGGEGGKRPDRAVIVYAQRCREAFKDVPVVLGGIEASLRRIAHFD
IWSEKLRRSVLLDAKADLLVFGNAERAIVDIARRSAAGEAPREMHDIRGTVFVRPGVPEDWRVVDASDLETAPPALKGDK
VVVRLPSFEQVQDDPVLYAQASRVLHQESNPLNARPLVQRHGDRELWVTEPPIPLSTPELDGVYDLPYARGPHPSYGEAK
IPAWEMIRFSINIVRGCFGGCSFCSITEHEGRIIQSRSADSIIHEIEEIRDKTKGFTGTISDLGGPTANMWRLGCREPEV
QKVCRRLSCVYPDICKTLGTDHDPLIRLYRAARGVKGVKRVNIGSGVRYDLAVTSPAYVDELVRHHVGGYLKIAPEHTED
GPLSKMMKPGIGSYERFKDMFEKAAVKAGKKLYLIPYFIAAHPGTSDQDMLNLALWLKKNGFRLDQVQTFLPTPMSLATA
MYHSGRDPIRPVRRVGEEVFTAKGLRQRRLHKAFLRWHDPENWPILREALQKMGRADLIGPGNHQLVPRGGAAAAQAVGA
KPGARRDQPPLRRRPSGRKAAPGEGRT

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=653, Percent_Identity=61.5620214395099, Blast_Score=850, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 74250; Mature: 74119

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVQPLSFPRRGAAPFLPMSRAEMETLGWDQCDVVLVTGDAYVDHPSFGMAIVGRLLES
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHHHHHHHHC
QGFKVGIIAQPDWSGPEPFRALGRPRLFFGVTAGNMDSMVNRYTSDRRLRSDDSYTPGGE
CCCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
GGKRPDRAVIVYAQRCREAFKDVPVVLGGIEASLRRIAHFDIWSEKLRRSVLLDAKADLL
CCCCCCCEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VFGNAERAIVDIARRSAAGEAPREMHDIRGTVFVRPGVPEDWRVVDASDLETAPPALKGD
EECCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCC
KVVVRLPSFEQVQDDPVLYAQASRVLHQESNPLNARPLVQRHGDRELWVTEPPIPLSTPE
EEEEECCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCC
LDGVYDLPYARGPHPSYGEAKIPAWEMIRFSINIVRGCFGGCSFCSITEHEGRIIQSRSA
CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCH
DSIIHEIEEIRDKTKGFTGTISDLGGPTANMWRLGCREPEVQKVCRRLSCVYPDICKTLG
HHHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHC
TDHDPLIRLYRAARGVKGVKRVNIGSGVRYDLAVTSPAYVDELVRHHVGGYLKIAPEHTE
CCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCC
DGPLSKMMKPGIGSYERFKDMFEKAAVKAGKKLYLIPYFIAAHPGTSDQDMLNLALWLKK
CCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHC
NGFRLDQVQTFLPTPMSLATAMYHSGRDPIRPVRRVGEEVFTAKGLRQRRLHKAFLRWHD
CCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PENWPILREALQKMGRADLIGPGNHQLVPRGGAAAAQAVGAKPGARRDQPPLRRRPSGRK
CCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCC
AAPGEGRT
CCCCCCCC
>Mature Secondary Structure 
TPVQPLSFPRRGAAPFLPMSRAEMETLGWDQCDVVLVTGDAYVDHPSFGMAIVGRLLES
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHHHHHHHHC
QGFKVGIIAQPDWSGPEPFRALGRPRLFFGVTAGNMDSMVNRYTSDRRLRSDDSYTPGGE
CCCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
GGKRPDRAVIVYAQRCREAFKDVPVVLGGIEASLRRIAHFDIWSEKLRRSVLLDAKADLL
CCCCCCCEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VFGNAERAIVDIARRSAAGEAPREMHDIRGTVFVRPGVPEDWRVVDASDLETAPPALKGD
EECCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCC
KVVVRLPSFEQVQDDPVLYAQASRVLHQESNPLNARPLVQRHGDRELWVTEPPIPLSTPE
EEEEECCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCC
LDGVYDLPYARGPHPSYGEAKIPAWEMIRFSINIVRGCFGGCSFCSITEHEGRIIQSRSA
CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCH
DSIIHEIEEIRDKTKGFTGTISDLGGPTANMWRLGCREPEVQKVCRRLSCVYPDICKTLG
HHHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHC
TDHDPLIRLYRAARGVKGVKRVNIGSGVRYDLAVTSPAYVDELVRHHVGGYLKIAPEHTE
CCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCC
DGPLSKMMKPGIGSYERFKDMFEKAAVKAGKKLYLIPYFIAAHPGTSDQDMLNLALWLKK
CCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHC
NGFRLDQVQTFLPTPMSLATAMYHSGRDPIRPVRRVGEEVFTAKGLRQRRLHKAFLRWHD
CCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PENWPILREALQKMGRADLIGPGNHQLVPRGGAAAAQAVGAKPGARRDQPPLRRRPSGRK
CCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCC
AAPGEGRT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA