| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312197
Identifier: 83312197
GI number: 83312197
Start: 3349152
End: 3350282
Strand: Reverse
Name: 83312197
Synonym: amb3098
Alternate gene names: NA
Gene position: 3350282-3349152 (Counterclockwise)
Preceding gene: 83312201
Following gene: 83312196
Centisome position: 67.45
GC content: 67.64
Gene sequence:
>1131_bases GTGCCTCCTCGGCCTGCCCATAGCAAGAGTCATTGGCTTGAAGCGCAAAACGCGCTACCGTCTATGCTGCATTGCAGCAT TTTGACGAGGGCGGCAATGGTGACGCGGGTCAGACGGACGCTAAAGGGCTGGGTGCGGCGGTGGCTGCCGCTGCTGCTGG CGCCGCCCGCCCTGGTGGCCCTGCTGTTCAACGCCTGGGACTTCGCCAGCCTGTGGATCGAGCACGACCGGGCCTACGAG GAGGCCCAGCATCAGGTCCAGGTTCTGGCCCGCGACGTTTCCCGGACCCTGACCACCACGCTGGGGCCGGTGGACATTCA CATCACCGACCATCTGCGGCCGGTGGCGACGCGCTTCGTCACCACCCAGGCCTCCTTGCCGCAATTGCAGCGGGTCTTCC AGCTGACCACCCAGCGCCTGCCCCAGGTGGCGGCGGTGCTGGTGTTCGATGCCTCGGGGCGCGGCGTGGCGGCGTCGGTG CCGCTGTCGCGGCCCGGCCCCAGCCTGGCGAACGGCTTCTTCTTCCAGAAGCACCGCGACCAGGGATTGGAAAGCGCCGT CTTCGTCGGCGATGCCTCGGTGACCCTGGGGGAGACGGGGCCGACCCGCTGGCGGCTGATGATGAGCCGCCGGCTGCAGG ATCTGGACGGCCGCTTCATGGGGATGCTGCTGCTGCAGTTCGACACCGAGCACATTTTTTCGCAGATCGCCGCCCTCGAG CTCATGCCGGGGGCCGGGGTGCGCATCTTCGACGAGTCGGGCCGCCTGCTGGTCAACCATCCCCGCGACTATTCCCTGGC CGGGCGGACTTTCTGGGACAGCCGGCTGTTCCGCCGCTGGGACGCCGAACGGCGGGAACTGGTCGGGCGCATTCCCGATC CCACCGATGAATCGCCGGAAATCGGCGCCTTCCGCGCCATCGACGGCTATTCCCTCCTGGTCTCGGTCGGGCTGTCCGAG GATCTGGCCCTGGTGGAATGGTGGCGGGAACTGGCCCTTCTGCTCCTCACCGTCGGCGTGTTCGTCGCCGCCTCCAGCGT GGCGGCGCGCCGCGTGCTGGCGAAATGGGTGTTGCATCTGAATGGCAAAGGGGAGGATGACAGGGGATACCGAGACGGCG ACGGCATTTGA
Upstream 100 bases:
>100_bases CGGTCCAGGCATGGCGCCAGCACCAGTCAACAAGTCGAACCGCCAGTATCCTGATCATCTTTTCCCGGCTTATCCGCTGG AGCGAAAACAAGGGGGGAAT
Downstream 100 bases:
>100_bases TTTCCTGATCATGACACCAGTTCAGCCCCTTTCCTTTCCCCGCCGTGGCGCGGCGCCCTTCCTGCCCATGAGCCGGGCCG AGATGGAGACGCTCGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MPPRPAHSKSHWLEAQNALPSMLHCSILTRAAMVTRVRRTLKGWVRRWLPLLLAPPALVALLFNAWDFASLWIEHDRAYE EAQHQVQVLARDVSRTLTTTLGPVDIHITDHLRPVATRFVTTQASLPQLQRVFQLTTQRLPQVAAVLVFDASGRGVAASV PLSRPGPSLANGFFFQKHRDQGLESAVFVGDASVTLGETGPTRWRLMMSRRLQDLDGRFMGMLLLQFDTEHIFSQIAALE LMPGAGVRIFDESGRLLVNHPRDYSLAGRTFWDSRLFRRWDAERRELVGRIPDPTDESPEIGAFRAIDGYSLLVSVGLSE DLALVEWWRELALLLLTVGVFVAASSVAARRVLAKWVLHLNGKGEDDRGYRDGDGI
Sequences:
>Translated_376_residues MPPRPAHSKSHWLEAQNALPSMLHCSILTRAAMVTRVRRTLKGWVRRWLPLLLAPPALVALLFNAWDFASLWIEHDRAYE EAQHQVQVLARDVSRTLTTTLGPVDIHITDHLRPVATRFVTTQASLPQLQRVFQLTTQRLPQVAAVLVFDASGRGVAASV PLSRPGPSLANGFFFQKHRDQGLESAVFVGDASVTLGETGPTRWRLMMSRRLQDLDGRFMGMLLLQFDTEHIFSQIAALE LMPGAGVRIFDESGRLLVNHPRDYSLAGRTFWDSRLFRRWDAERRELVGRIPDPTDESPEIGAFRAIDGYSLLVSVGLSE DLALVEWWRELALLLLTVGVFVAASSVAARRVLAKWVLHLNGKGEDDRGYRDGDGI >Mature_375_residues PPRPAHSKSHWLEAQNALPSMLHCSILTRAAMVTRVRRTLKGWVRRWLPLLLAPPALVALLFNAWDFASLWIEHDRAYEE AQHQVQVLARDVSRTLTTTLGPVDIHITDHLRPVATRFVTTQASLPQLQRVFQLTTQRLPQVAAVLVFDASGRGVAASVP LSRPGPSLANGFFFQKHRDQGLESAVFVGDASVTLGETGPTRWRLMMSRRLQDLDGRFMGMLLLQFDTEHIFSQIAALEL MPGAGVRIFDESGRLLVNHPRDYSLAGRTFWDSRLFRRWDAERRELVGRIPDPTDESPEIGAFRAIDGYSLLVSVGLSED LALVEWWRELALLLLTVGVFVAASSVAARRVLAKWVLHLNGKGEDDRGYRDGDGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42163; Mature: 42032
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRPAHSKSHWLEAQNALPSMLHCSILTRAAMVTRVRRTLKGWVRRWLPLLLAPPALVA CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LLFNAWDFASLWIEHDRAYEEAQHQVQVLARDVSRTLTTTLGPVDIHITDHLRPVATRFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH TTQASLPQLQRVFQLTTQRLPQVAAVLVFDASGRGVAASVPLSRPGPSLANGFFFQKHRD HCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCHHHCCHHHHHHHH QGLESAVFVGDASVTLGETGPTRWRLMMSRRLQDLDGRFMGMLLLQFDTEHIFSQIAALE CCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LMPGAGVRIFDESGRLLVNHPRDYSLAGRTFWDSRLFRRWDAERRELVGRIPDPTDESPE CCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC IGAFRAIDGYSLLVSVGLSEDLALVEWWRELALLLLTVGVFVAASSVAARRVLAKWVLHL CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NGKGEDDRGYRDGDGI CCCCCCCCCCCCCCCC >Mature Secondary Structure PPRPAHSKSHWLEAQNALPSMLHCSILTRAAMVTRVRRTLKGWVRRWLPLLLAPPALVA CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LLFNAWDFASLWIEHDRAYEEAQHQVQVLARDVSRTLTTTLGPVDIHITDHLRPVATRFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH TTQASLPQLQRVFQLTTQRLPQVAAVLVFDASGRGVAASVPLSRPGPSLANGFFFQKHRD HCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCHHHCCHHHHHHHH QGLESAVFVGDASVTLGETGPTRWRLMMSRRLQDLDGRFMGMLLLQFDTEHIFSQIAALE CCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LMPGAGVRIFDESGRLLVNHPRDYSLAGRTFWDSRLFRRWDAERRELVGRIPDPTDESPE CCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC IGAFRAIDGYSLLVSVGLSEDLALVEWWRELALLLLTVGVFVAASSVAARRVLAKWVLHL CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NGKGEDDRGYRDGDGI CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA