| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312170
Identifier: 83312170
GI number: 83312170
Start: 3321665
End: 3322741
Strand: Reverse
Name: 83312170
Synonym: amb3071
Alternate gene names: NA
Gene position: 3322741-3321665 (Counterclockwise)
Preceding gene: 83312172
Following gene: 83312169
Centisome position: 66.89
GC content: 67.97
Gene sequence:
>1077_bases ATGCGTCAGTCCACAACTCCACAGCGTCCCCTCGTGTGTTCCGGCGATGTGGGAAACATGATCAGCACGGCGCTGAGCAA TATGCTGCTGTCCATCCTGACCCTGTCCATCTACCGCTTCTGGGGCAAAACCAATGTGCGCCGCCAGTTGTGGAGCGCCA CCCGCGCCTGGGGCGATCCGCTGGAATATACCGGCACCGGCAAGGAGCTGTTCATCGGCTTCCTGATCGTGCTGGTGATC GTCTACCTGCCGCTGGTGGCCGGCTTCGCCTCGGCGCAGGTGCTGCTGGTGTCGGGCAATCCCCTGGGGGCGCTGCTGCT GTCGGGGCTTTACCTGCTGACCATCTTGCTGGTGTCGGTGGGCCTTTATCGGGCGCGGCGCTACCAGATGTCGCGTACCC TGTGGCGCGGCATCCGGGGCGGCCAGACCGGATCGGGCTGGGGCTATGCCCTGCGCAGCCTGGCGGTGTGGATGGCCGTG CCGCTCAGCCTGGGCTGGGCCTTGCCCTGGGGCGAGATGTGGCTGGCCTCCTACCGCCTCAACAACACGACCTTCGGCGA CCGTCGCTTCACCTGCGACGCCACCGCCTCGGGTCTCTACGGCCGCTTTACCCTGGTGTGGTTCAGCGGGCTGATCTTCG CGGTGGCGGCCATCGCCGCCGCCGCCGGCGCCTCTTCCCTGGTGGGGGAGAGCGAGGAGGACCAGGCGGCGGCCGGAATC GGCTTCGCCATGCTTCTCGTGCCGGTGGCGGTGGTGACCATGGCCCTGCCCCTGGCGTGGTACCGGGCGGGCTTTTACCG CAATCTGGCGGCGGGGACCGAATTCGAGGGCAGCCGCTTCTCGGCCGACACCCGGGCCTGGCGGCTGATCGGGCTGGTGA TGGGCAACATGCTGATCTCGCTGTTCAGCTTCGGGATCTTGCGCCCCTGGGCATCCCTGCGCACCTTTCGCTACGCCTGT TCGGTGATCGGGGTCGAGGGCGAGCCTGATTTCGCCCGGGTCCACCGGGCCGAGGATACCGGGCCGAGCACCGGGGAGGG GCTGGTGGCGGTGCTGGACGGGGCCGGCGAGTTTTGA
Upstream 100 bases:
>100_bases GGGGGAATGCCGCCCTCCAGTGTAGCAGCGAATGCATCGCGCCTCATCGACAAGATGGGGACTGGCGGTTACCCTGCCAT GATCCGGTCGGGAGAAAGCC
Downstream 100 bases:
>100_bases TCGCCACCGAGGCCGAGCGCCCGGGGCGGTTCAGCGACGGCCGCAGCGCCGCCTCGCGCAAGGTGATGGTCCGCGTCCAG TCCGGCGGCCTGGAAATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRQSTTPQRPLVCSGDVGNMISTALSNMLLSILTLSIYRFWGKTNVRRQLWSATRAWGDPLEYTGTGKELFIGFLIVLVI VYLPLVAGFASAQVLLVSGNPLGALLLSGLYLLTILLVSVGLYRARRYQMSRTLWRGIRGGQTGSGWGYALRSLAVWMAV PLSLGWALPWGEMWLASYRLNNTTFGDRRFTCDATASGLYGRFTLVWFSGLIFAVAAIAAAAGASSLVGESEEDQAAAGI GFAMLLVPVAVVTMALPLAWYRAGFYRNLAAGTEFEGSRFSADTRAWRLIGLVMGNMLISLFSFGILRPWASLRTFRYAC SVIGVEGEPDFARVHRAEDTGPSTGEGLVAVLDGAGEF
Sequences:
>Translated_358_residues MRQSTTPQRPLVCSGDVGNMISTALSNMLLSILTLSIYRFWGKTNVRRQLWSATRAWGDPLEYTGTGKELFIGFLIVLVI VYLPLVAGFASAQVLLVSGNPLGALLLSGLYLLTILLVSVGLYRARRYQMSRTLWRGIRGGQTGSGWGYALRSLAVWMAV PLSLGWALPWGEMWLASYRLNNTTFGDRRFTCDATASGLYGRFTLVWFSGLIFAVAAIAAAAGASSLVGESEEDQAAAGI GFAMLLVPVAVVTMALPLAWYRAGFYRNLAAGTEFEGSRFSADTRAWRLIGLVMGNMLISLFSFGILRPWASLRTFRYAC SVIGVEGEPDFARVHRAEDTGPSTGEGLVAVLDGAGEF >Mature_358_residues MRQSTTPQRPLVCSGDVGNMISTALSNMLLSILTLSIYRFWGKTNVRRQLWSATRAWGDPLEYTGTGKELFIGFLIVLVI VYLPLVAGFASAQVLLVSGNPLGALLLSGLYLLTILLVSVGLYRARRYQMSRTLWRGIRGGQTGSGWGYALRSLAVWMAV PLSLGWALPWGEMWLASYRLNNTTFGDRRFTCDATASGLYGRFTLVWFSGLIFAVAAIAAAAGASSLVGESEEDQAAAGI GFAMLLVPVAVVTMALPLAWYRAGFYRNLAAGTEFEGSRFSADTRAWRLIGLVMGNMLISLFSFGILRPWASLRTFRYAC SVIGVEGEPDFARVHRAEDTGPSTGEGLVAVLDGAGEF
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38817; Mature: 38817
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQSTTPQRPLVCSGDVGNMISTALSNMLLSILTLSIYRFWGKTNVRRQLWSATRAWGDP CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC LEYTGTGKELFIGFLIVLVIVYLPLVAGFASAQVLLVSGNPLGALLLSGLYLLTILLVSV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH GLYRARRYQMSRTLWRGIRGGQTGSGWGYALRSLAVWMAVPLSLGWALPWGEMWLASYRL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC NNTTFGDRRFTCDATASGLYGRFTLVWFSGLIFAVAAIAAAAGASSLVGESEEDQAAAGI CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHH GFAMLLVPVAVVTMALPLAWYRAGFYRNLAAGTEFEGSRFSADTRAWRLIGLVMGNMLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LFSFGILRPWASLRTFRYACSVIGVEGEPDFARVHRAEDTGPSTGEGLVAVLDGAGEF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MRQSTTPQRPLVCSGDVGNMISTALSNMLLSILTLSIYRFWGKTNVRRQLWSATRAWGDP CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC LEYTGTGKELFIGFLIVLVIVYLPLVAGFASAQVLLVSGNPLGALLLSGLYLLTILLVSV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH GLYRARRYQMSRTLWRGIRGGQTGSGWGYALRSLAVWMAVPLSLGWALPWGEMWLASYRL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC NNTTFGDRRFTCDATASGLYGRFTLVWFSGLIFAVAAIAAAAGASSLVGESEEDQAAAGI CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHH GFAMLLVPVAVVTMALPLAWYRAGFYRNLAAGTEFEGSRFSADTRAWRLIGLVMGNMLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LFSFGILRPWASLRTFRYACSVIGVEGEPDFARVHRAEDTGPSTGEGLVAVLDGAGEF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA