| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312120
Identifier: 83312120
GI number: 83312120
Start: 3265356
End: 3266057
Strand: Reverse
Name: 83312120
Synonym: amb3021
Alternate gene names: NA
Gene position: 3266057-3265356 (Counterclockwise)
Preceding gene: 83312121
Following gene: 83312118
Centisome position: 65.75
GC content: 67.95
Gene sequence:
>702_bases ATGAATCCCTTCGCCCTGCTGCCTCCTGTCGATCTGGCCGCCTTTGGCGCTTTCCTGGCGCTATGGGTCGGATACACCGT CATGGCCGACCGCCTGACCGCCGACGGCCATACCCTGCTGGCGGCGACGGCGCGGCTCCGGCACACCTGGATGCGCAATA TGTGCGACCGGGAGGTCCGGGTGGCCGACAGCGCCCTGCTGGGCAATCTGATGCGGAGCGTCTCGTTCTTCGCCTCGGCC TCCATCCTGATCCTCGGTGGTCTGGTGGCCCTGCTGGGAGCGGGTGAGCGGGCCTATGCGGTGGTCCAGGACCTGCCCCT GGTCGCCGAATCCCCAAGAGGTGTCTTCGAGACCAAGGTGGTGCTGCTGGCCGGCGTGTTCGTCTACGCCTTTTTCCAGA TCACCTGGTCGCTGCGGCAGTTCAATTACTGCTGCGTCCTGCTGGGCGCGGCGCCGAACGCCGATGCGGCGCCCGCGGTC AAGGACACCTACGCGGAGAACGCCGCCCGGCTCAACGCCCTGGCCGCCCACAGCTTCAATCGGGGCCTGCGCGGCTATTA CTTCGCCCTGGCGCTGATGACCTGGTTCATCCACGCCGGAGCCATGGTGGCGGCCACCGCCGTGGTGGTGGCGGTGCTGT ATCGCCGGGAATTCCGCTCCAAGACCCTGCGGGCGCTCAACGCGGCGGTGCCGCCGACCTGA
Upstream 100 bases:
>100_bases GCCCGGCTTTGCCGATGATCCCGCCAAGTCCAACGAGAAGATTCTCGAGGCCATTCAGATGGCCTGGATCGATGAGCGGG ATTAGCGCAGACTTCTCCCC
Downstream 100 bases:
>100_bases TTGGGCTGTCGCCCAAGCCCACTCGGGGCGATGCCCCGAACCCCCTTCTGATTTTATCAATGGGGTTTGGGGCCCGCGGC CCCAAGCGGGTATGGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNPFALLPPVDLAAFGAFLALWVGYTVMADRLTADGHTLLAATARLRHTWMRNMCDREVRVADSALLGNLMRSVSFFASA SILILGGLVALLGAGERAYAVVQDLPLVAESPRGVFETKVVLLAGVFVYAFFQITWSLRQFNYCCVLLGAAPNADAAPAV KDTYAENAARLNALAAHSFNRGLRGYYFALALMTWFIHAGAMVAATAVVVAVLYRREFRSKTLRALNAAVPPT
Sequences:
>Translated_233_residues MNPFALLPPVDLAAFGAFLALWVGYTVMADRLTADGHTLLAATARLRHTWMRNMCDREVRVADSALLGNLMRSVSFFASA SILILGGLVALLGAGERAYAVVQDLPLVAESPRGVFETKVVLLAGVFVYAFFQITWSLRQFNYCCVLLGAAPNADAAPAV KDTYAENAARLNALAAHSFNRGLRGYYFALALMTWFIHAGAMVAATAVVVAVLYRREFRSKTLRALNAAVPPT >Mature_233_residues MNPFALLPPVDLAAFGAFLALWVGYTVMADRLTADGHTLLAATARLRHTWMRNMCDREVRVADSALLGNLMRSVSFFASA SILILGGLVALLGAGERAYAVVQDLPLVAESPRGVFETKVVLLAGVFVYAFFQITWSLRQFNYCCVLLGAAPNADAAPAV KDTYAENAARLNALAAHSFNRGLRGYYFALALMTWFIHAGAMVAATAVVVAVLYRREFRSKTLRALNAAVPPT
Specific function: Unknown
COG id: COG3821
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25203; Mature: 25203
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFALLPPVDLAAFGAFLALWVGYTVMADRLTADGHTLLAATARLRHTWMRNMCDREVR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VADSALLGNLMRSVSFFASASILILGGLVALLGAGERAYAVVQDLPLVAESPRGVFETKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCHHHHHH VLLAGVFVYAFFQITWSLRQFNYCCVLLGAAPNADAAPAVKDTYAENAARLNALAAHSFN HHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC RGLRGYYFALALMTWFIHAGAMVAATAVVVAVLYRREFRSKTLRALNAAVPPT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNPFALLPPVDLAAFGAFLALWVGYTVMADRLTADGHTLLAATARLRHTWMRNMCDREVR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VADSALLGNLMRSVSFFASASILILGGLVALLGAGERAYAVVQDLPLVAESPRGVFETKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCHHHHHH VLLAGVFVYAFFQITWSLRQFNYCCVLLGAAPNADAAPAVKDTYAENAARLNALAAHSFN HHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC RGLRGYYFALALMTWFIHAGAMVAATAVVVAVLYRREFRSKTLRALNAAVPPT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA