| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yfhJ [C]
Identifier: 83312121
GI number: 83312121
Start: 3266073
End: 3266267
Strand: Reverse
Name: yfhJ [C]
Synonym: amb3022
Alternate gene names: 83312121
Gene position: 3266267-3266073 (Counterclockwise)
Preceding gene: 83312122
Following gene: 83312120
Centisome position: 65.76
GC content: 58.46
Gene sequence:
>195_bases ATGAAGTGGACCGACACCCTCGACATCGCCATCGCCCTGGAAGAAGCGCATCCTGACGCCGACAACGTCAATTTGCGCTT CACCGACCTGCACCGATGGGTCTGCGATCTGCCCGGCTTTGCCGATGATCCCGCCAAGTCCAACGAGAAGATTCTCGAGG CCATTCAGATGGCCTGGATCGATGAGCGGGATTAG
Upstream 100 bases:
>100_bases TGCCAGATCATCATGAGCAAGGAGCTGGACGGCCTGGTGGTCACCCTGCCGGCCGCCACCCGCAACATGATGGTCGACAA GAAGTAGGGAGCGGCTGGCG
Downstream 100 bases:
>100_bases CGCAGACTTCTCCCCATGAATCCCTTCGCCCTGCTGCCTCCTGTCGATCTGGCCGCCTTTGGCGCTTTCCTGGCGCTATG GGTCGGATACACCGTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MKWTDTLDIAIALEEAHPDADNVNLRFTDLHRWVCDLPGFADDPAKSNEKILEAIQMAWIDERD
Sequences:
>Translated_64_residues MKWTDTLDIAIALEEAHPDADNVNLRFTDLHRWVCDLPGFADDPAKSNEKILEAIQMAWIDERD >Mature_64_residues MKWTDTLDIAIALEEAHPDADNVNLRFTDLHRWVCDLPGFADDPAKSNEKILEAIQMAWIDERD
Specific function: Unknown
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfhJ [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=62, Percent_Identity=58.0645161290323, Blast_Score=80, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 7381; Mature: 7381
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWTDTLDIAIALEEAHPDADNVNLRFTDLHRWVCDLPGFADDPAKSNEKILEAIQMAWI CCCCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC DERD CCCC >Mature Secondary Structure MKWTDTLDIAIALEEAHPDADNVNLRFTDLHRWVCDLPGFADDPAKSNEKILEAIQMAWI CCCCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC DERD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809750; 10984043 [H]