| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is braD [H]
Identifier: 83311972
GI number: 83311972
Start: 3072756
End: 3073616
Strand: Reverse
Name: braD [H]
Synonym: amb2873
Alternate gene names: 83311972
Gene position: 3073616-3072756 (Counterclockwise)
Preceding gene: 83311973
Following gene: 83311971
Centisome position: 61.88
GC content: 64.92
Gene sequence:
>861_bases ATGGATTTCTGGTTTTTCCTGATTCAGGTGCTGAACGGCGTCCAATACGGGCTGCTGCTGTTCCTGGTCGCCTCCGGGCT GACCCTGATCTTCGGCATCATGGGCATCATCAATCTGGCCCATGGCGCCTTCTACATGCTGGGCGCCTATCTGGCCTATT GGCTGGCCCGGACCACCGGCAGCCTCGGTGCGGCGGTGCTGCTGTCGCTGCCCATCGCCGCCGCCATCGGCTATGGCATC GAGGCCCTGCTGGTTCGCACCCTGTATCGCCGCGACCATCTGGATCAGGTGCTGCTGACCTATGGTCTGATCCTGATCTT CAACGAGGCCACCCGCATGATCTGGGGGGCCGATGTGCACGGCGTGGCGGTGCCCGCCGCGCTCAACTGGTCCATCCGGC TGACCGACACTCTGTCCTATCCCGTCTACCGCCTGATGCTGTCGGGGGTCTGCGCCGTGCTGGCCGTCGGCATGTATTTG GTCATTACCCGGACCCGCTTCGGCATGTGGGTGCGGGCCGGGGCCTCCAATCGCGACATGGTGGCGGCGCTGGGCATCAA CGTGAAGCTGCTGTTCGGCGTGGTGTTCGCCCTGGGCGCCGCCCTGGCCGGACTGGCCGGAGCCATCTCGACGCCCATCA CCTCGGTGGCGCCGGGCATGGGGGATTCCGTGTTGATCCTGTGCTTCGTGGTGGTGGTGATCGGCGGCGTCGGCTCCATC AAGGGCGCCTTTCTCGGCGCCATGCTGATCGGTCTGGCCGACACCTTCGGCAAGGTCTTCGCCCCCGATTTCGCCAGTTT CACCGTCTATGGCGTGATGGCGGCGGTGCTATTGTGGAAGCCCCGGGGGCTGTTCTCATGA
Upstream 100 bases:
>100_bases CGCGGAGGTGGAGGCCGCTGCCCGCCGGACCCTTGGTGCCGGTGGGGGCGGGCTTCGCGGGGCGGTGAACTCGACTCGAC GCGCGCGGTCTGGAGCCACG
Downstream 100 bases:
>100_bases ACCGTCTTCCCCGCCGGCTTTCCCTGCTTCTCCTGGTGCTGCTGGCGGCCCTGGCGCTGTTCCCGGCCTGGGGGCCGCTG GCCTTTTCCGCCAAATACGC
Product: branched chain amino acid ABC transporter
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MDFWFFLIQVLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAYWLARTTGSLGAAVLLSLPIAAAIGYGI EALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADVHGVAVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYL VITRTRFGMWVRAGASNRDMVAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGGVGSI KGAFLGAMLIGLADTFGKVFAPDFASFTVYGVMAAVLLWKPRGLFS
Sequences:
>Translated_286_residues MDFWFFLIQVLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAYWLARTTGSLGAAVLLSLPIAAAIGYGI EALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADVHGVAVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYL VITRTRFGMWVRAGASNRDMVAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGGVGSI KGAFLGAMLIGLADTFGKVFAPDFASFTVYGVMAAVLLWKPRGLFS >Mature_286_residues MDFWFFLIQVLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAYWLARTTGSLGAAVLLSLPIAAAIGYGI EALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADVHGVAVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYL VITRTRFGMWVRAGASNRDMVAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGGVGSI KGAFLGAMLIGLADTFGKVFAPDFASFTVYGVMAAVLLWKPRGLFS
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=311, Percent_Identity=26.6881028938907, Blast_Score=94, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30370; Mature: 30370
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFWFFLIQVLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAYWLARTTG CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLGAAVLLSLPIAAAIGYGIEALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADVH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVAVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYLVITRTRFGMWVRAGASNRDM CEEECEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCE VAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGGVGSI EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCHH KGAFLGAMLIGLADTFGKVFAPDFASFTVYGVMAAVLLWKPRGLFS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDFWFFLIQVLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAYWLARTTG CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLGAAVLLSLPIAAAIGYGIEALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADVH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVAVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYLVITRTRFGMWVRAGASNRDM CEEECEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCE VAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGGVGSI EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCHH KGAFLGAMLIGLADTFGKVFAPDFASFTVYGVMAAVLLWKPRGLFS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]