| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311973
Identifier: 83311973
GI number: 83311973
Start: 3073736
End: 3074959
Strand: Reverse
Name: 83311973
Synonym: amb2874
Alternate gene names: NA
Gene position: 3074959-3073736 (Counterclockwise)
Preceding gene: 83311975
Following gene: 83311972
Centisome position: 61.91
GC content: 65.6
Gene sequence:
>1224_bases GTGCCTGAATGCCTGGGAGGTATGGTCATGGAAGATTGCAAGGGATTTTCCCGCCGCGCGGTATTGCGGGCGGGCGCCGT CGTGGCTGCCGGCGCGGGGGGCTTCGTGCCGACCCGTTTCGCCATCGGCAACACCGCCAAGGTCAAGGTCGGCTTTCTGC TGCCTTATTCCGGCACCTATGCCGGCCTGGGCGAGGCCATCACCAACGGCTTCAAGCTGGCGCTGGAAGAGCGCGGCGGC AAACTGGGCGGACGCGACGTTCAGTTCATCGCCGTGGATGACGAGTCCAACCCAGCCAAGGGGCCGGAGAACACCAACAA GCTGGTGACCGGCGAGACCGTGGATTTCGTGGTGGGACCGGTCCATTCGGGCGTGGCCCTGGGCATGGTCAAGGTGGTGC GCGAGACCGGCACCATCGCCGTCATCGCCAATGCCGGGGCGGGTGCCGCCACCGGGCCGCTGTGCGCGCCCAATATCTTC CGCACCTCGTTCACCAACTGGCAGACCGCTTTCCCCATGGGCAAGGTCGCCGTCGACCGCGGCATGAAGAACGTGGTCAC CATGTCGTGGAAATACGCGGCGGGCGAGGAGGCGGTCAACGGCTTCGAGCAGGGCTTCACCAAGGCGGGCGGCAAGGTCG CCAAGCAGATCCTGGTGCCCTTCCCGCAGGAGGAATTCCAGGCCAACCTGACGGAGATCGCCTCGCTGAAGCCCGATGGC GTCTTCGTCTTCTTCGCCGGGTCCGGGGCGCTGAAGTTCGTCAAGGATTACGCGGCGGCGGGTCTCAAATCCATTCCGCT GATGGGGCCGGGCTTCCTCACCGATGGCGTGCTGAAGGCGCAGGGCGACGCCGCCGAGGGCGTCCTGACCACTCTTCATT ACGCCGATGCGCTGGATACGCCGGAAAATACCTCGTTCCGCGCCGCCTATCGCAAGGCCTTCTCCAAGGAGGCCGATGTC TACGCGGTGCAGGGCTATGATTCCGCCCAGTTGCTGTTCCAGGGCATGGGAGCGGTCAAGGGCGATGCCGGCGCCAAGGC CGAACTGATCGCCGCCATGGAAAAGGCGGTGATCAAGAGCCCGCGTGGCACCTTCACCCTGTCCAAGGCCCATAACCCGG TGCAGGACATCTACCTGCGCCAGGTCAAGGGCGGCCAGGAAGTGGTGGTCGGCGTGGCGGACAAGGCCCTGGCCGATCCG GCCATCGGCTGCAAGATGGGCTGA
Upstream 100 bases:
>100_bases ATGCGATGTCGCCCGTTCCGGTGGAGCGGAAAGGGCGGGGAGGGGAACTTCCGGCCGGGACTGCCGGGTTCCTTCAACGA GACAACGGAACGGGCCGAAA
Downstream 100 bases:
>100_bases TCGTTCGAGACGGCCGCCCCGCGGAGGTGGAGGCCGCTGCCCGCCGGACCCTTGGTGCCGGTGGGGGCGGGCTTCGCGGG GCGGTGAACTCGACTCGACG
Product: ABC-type branched-chain amino acid transport systems
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPECLGGMVMEDCKGFSRRAVLRAGAVVAAGAGGFVPTRFAIGNTAKVKVGFLLPYSGTYAGLGEAITNGFKLALEERGG KLGGRDVQFIAVDDESNPAKGPENTNKLVTGETVDFVVGPVHSGVALGMVKVVRETGTIAVIANAGAGAATGPLCAPNIF RTSFTNWQTAFPMGKVAVDRGMKNVVTMSWKYAAGEEAVNGFEQGFTKAGGKVAKQILVPFPQEEFQANLTEIASLKPDG VFVFFAGSGALKFVKDYAAAGLKSIPLMGPGFLTDGVLKAQGDAAEGVLTTLHYADALDTPENTSFRAAYRKAFSKEADV YAVQGYDSAQLLFQGMGAVKGDAGAKAELIAAMEKAVIKSPRGTFTLSKAHNPVQDIYLRQVKGGQEVVVGVADKALADP AIGCKMG
Sequences:
>Translated_407_residues MPECLGGMVMEDCKGFSRRAVLRAGAVVAAGAGGFVPTRFAIGNTAKVKVGFLLPYSGTYAGLGEAITNGFKLALEERGG KLGGRDVQFIAVDDESNPAKGPENTNKLVTGETVDFVVGPVHSGVALGMVKVVRETGTIAVIANAGAGAATGPLCAPNIF RTSFTNWQTAFPMGKVAVDRGMKNVVTMSWKYAAGEEAVNGFEQGFTKAGGKVAKQILVPFPQEEFQANLTEIASLKPDG VFVFFAGSGALKFVKDYAAAGLKSIPLMGPGFLTDGVLKAQGDAAEGVLTTLHYADALDTPENTSFRAAYRKAFSKEADV YAVQGYDSAQLLFQGMGAVKGDAGAKAELIAAMEKAVIKSPRGTFTLSKAHNPVQDIYLRQVKGGQEVVVGVADKALADP AIGCKMG >Mature_406_residues PECLGGMVMEDCKGFSRRAVLRAGAVVAAGAGGFVPTRFAIGNTAKVKVGFLLPYSGTYAGLGEAITNGFKLALEERGGK LGGRDVQFIAVDDESNPAKGPENTNKLVTGETVDFVVGPVHSGVALGMVKVVRETGTIAVIANAGAGAATGPLCAPNIFR TSFTNWQTAFPMGKVAVDRGMKNVVTMSWKYAAGEEAVNGFEQGFTKAGGKVAKQILVPFPQEEFQANLTEIASLKPDGV FVFFAGSGALKFVKDYAAAGLKSIPLMGPGFLTDGVLKAQGDAAEGVLTTLHYADALDTPENTSFRAAYRKAFSKEADVY AVQGYDSAQLLFQGMGAVKGDAGAKAELIAAMEKAVIKSPRGTFTLSKAHNPVQDIYLRQVKGGQEVVVGVADKALADPA IGCKMG
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42334; Mature: 42203
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPECLGGMVMEDCKGFSRRAVLRAGAVVAAGAGGFVPTRFAIGNTAKVKVGFLLPYSGTY CCCHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCC AGLGEAITNGFKLALEERGGKLGGRDVQFIAVDDESNPAKGPENTNKLVTGETVDFVVGP HHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECC VHSGVALGMVKVVRETGTIAVIANAGAGAATGPLCAPNIFRTSFTNWQTAFPMGKVAVDR CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHC GMKNVVTMSWKYAAGEEAVNGFEQGFTKAGGKVAKQILVPFPQEEFQANLTEIASLKPDG CCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCHHHHHCCCCCC VFVFFAGSGALKFVKDYAAAGLKSIPLMGPGFLTDGVLKAQGDAAEGVLTTLHYADALDT EEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCC PENTSFRAAYRKAFSKEADVYAVQGYDSAQLLFQGMGAVKGDAGAKAELIAAMEKAVIKS CCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC PRGTFTLSKAHNPVQDIYLRQVKGGQEVVVGVADKALADPAIGCKMG CCCCEEECCCCCCHHHHHHHHCCCCCEEEEEECHHHHCCCCCCCCCC >Mature Secondary Structure PECLGGMVMEDCKGFSRRAVLRAGAVVAAGAGGFVPTRFAIGNTAKVKVGFLLPYSGTY CCHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCC AGLGEAITNGFKLALEERGGKLGGRDVQFIAVDDESNPAKGPENTNKLVTGETVDFVVGP HHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECC VHSGVALGMVKVVRETGTIAVIANAGAGAATGPLCAPNIFRTSFTNWQTAFPMGKVAVDR CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHC GMKNVVTMSWKYAAGEEAVNGFEQGFTKAGGKVAKQILVPFPQEEFQANLTEIASLKPDG CCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCHHHHHCCCCCC VFVFFAGSGALKFVKDYAAAGLKSIPLMGPGFLTDGVLKAQGDAAEGVLTTLHYADALDT EEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCC PENTSFRAAYRKAFSKEADVYAVQGYDSAQLLFQGMGAVKGDAGAKAELIAAMEKAVIKS CCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC PRGTFTLSKAHNPVQDIYLRQVKGGQEVVVGVADKALADPAIGCKMG CCCCEEECCCCCCHHHHHHHHCCCCCEEEEEECHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA