Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is yhiD [H]

Identifier: 83311855

GI number: 83311855

Start: 2942445

End: 2943155

Strand: Reverse

Name: yhiD [H]

Synonym: amb2756

Alternate gene names: 83311855

Gene position: 2943155-2942445 (Counterclockwise)

Preceding gene: 83311856

Following gene: 83311851

Centisome position: 59.25

GC content: 65.68

Gene sequence:

>711_bases
ATGGTCATGGAGGGACGGATGAACCCGCAGCATCTGGAAATCGCTCTCCATCTGGGCAGCGCCTGGGCCGCCGGCAGCCT
GGTGGGGGCGGAGCGCAGCTTTCACGGCCGTCCCGCCGGATTTCGCACCCACGCCCTGGTCTGCGTCGCCTCCGCCTTGC
TGATGCTGGTGACCGTCTACCAATGGGAATGGCTGGGCGTGGTGCCCCTGGAGACGGTGCGCACCGATCCCACCCGCATG
GCCCAGGGCATCATGACCGGCATCGGCTTCCTGGGGGCTGGGGTGATCTTCAAGGAAGGGCTGACGGTGCGTGGCCTGAC
CACCGCCGCCTCCATCTGGATGACCGCCGCCTTGGGAATTCTGTTCGGGATCGGGTTCTACTATCCGGCGTTGCTGGCTA
CGGGAGTGACGGTGGCGACCCTGGCGCTGTTCCGCATGGTGGAATACCGCATGCCGTCGCAGTTCTACGCCCACCACCTG
CTGCGCTTTGCCCGCGACAGGGCCATGCCCGAGGGTGAATTGCGCGGCCTGATCCAAGGCCACGGCTTCACCATCTCCAA
CATGAGTTACCGCCTGTGCGAGGGCGGCGACGTGTTCGAATACAAAATGGTGATCCGCACCGCCGACCGCGACAACGTCG
AACGGCTGGTGGAAGGATTGCGCGGGCTGGCCGACGTGCTGGAGTTCCGGGTCTCGCCCACCGGGGATTGA

Upstream 100 bases:

>100_bases
CGCCTTCCCGATTTACGGAGATGGCGTTTCGACATCCAACCGATATCGCTTTTGGCTGATTTATCGGCTGTCATAAAAGT
GTAACAATTCGCTCTCCATC

Downstream 100 bases:

>100_bases
TTGGAGACCGACGGGCCCCCACCCCGACCCTCCCCCAGCAAAGCCGGGGGAGGGGGAATAGGGTTGGGGAGGGAGCCTTT
ACGCCTTGGGCCGCTTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVYQWEWLGVVPLETVRTDPTRM
AQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGILFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHL
LRFARDRAMPEGELRGLIQGHGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD

Sequences:

>Translated_236_residues
MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVYQWEWLGVVPLETVRTDPTRM
AQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGILFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHL
LRFARDRAMPEGELRGLIQGHGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD
>Mature_236_residues
MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVYQWEWLGVVPLETVRTDPTRM
AQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGILFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHL
LRFARDRAMPEGELRGLIQGHGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=137, Percent_Identity=39.4160583941606, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25940; Mature: 25940

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVY
CCCCCCCCHHHEEEEEEECCCHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QWEWLGVVPLETVRTDPTRMAQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGI
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHH
LFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHLLRFARDRAMPEGELRGLIQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC
HGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD
CCEEECCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVY
CCCCCCCCHHHEEEEEEECCCHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QWEWLGVVPLETVRTDPTRMAQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGI
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHH
LFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHLLRFARDRAMPEGELRGLIQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC
HGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD
CCEEECCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]