| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311693
Identifier: 83311693
GI number: 83311693
Start: 2780388
End: 2781074
Strand: Reverse
Name: 83311693
Synonym: amb2594
Alternate gene names: NA
Gene position: 2781074-2780388 (Counterclockwise)
Preceding gene: 83311694
Following gene: 83311692
Centisome position: 55.99
GC content: 69.0
Gene sequence:
>687_bases ATGGCCATCAAGGAAATCCTCGTCCATGTGGAGCCCGACGCAGCCGGGGCGGGGCGTCTCGACCTCGCCCGAATGCTGGC GGCCGAGCACGGCGCCCGGCTGGTGGGGGTGGGCGAGGGTGACCTTGCCCCCGAGGGCGTCGACGAATGGCGCCCCATCA GCGGGGTGAAGCAACTGGCGCTGCATGCCCGCTACGCCGATCTCACCATCGTCGGGCAGGCGGCGTCGGGGAGTTCCGAT CACGTCACCGAGACCGTGATGAGCGTCGGCCGTCCCCTGCTGGCGGTGCCGCGTCATGGCCGCTTTCCCAGTGTCGGGCG GCGTGTGCTGGTGGCGTGGAACCAGTCGCGGGAGGCGACGCGGGCGGTGTTCGACGCCTTGCCGCTGCTGGCCGGGGCCT CCTCGGTGACGGTCATGACCATGGATGCCGAGGATGGCGACGGCCGCGTCGCCGGAGCCGATATCGGACTCACCCTGGCG CGGCATGGCATCAAGGTGGATATCCTGCGCTCCACCTCGGGCGATATCGACGCCGGCAATGCGCTGCTGTCGCGGGCGGC CGAGCAGGGGGCCGATCTGCTGATCATGGGCGCCTTTGGCCATTCGCCGTTGCGCGAAAAGGTTCTGGGCGGGGCCACCC GTCATATTCTCGACCATATGACCGTCCCTGTCCTGCTGTCGCATTGA
Upstream 100 bases:
>100_bases GGCGCGGCAGTTGCAGCGGACCGGCGGGCGCCATGCCGTGGTCTCCTTGTGCATCGGCGTCGGCCACGGCCTCGCCGCCG TGATCGAAAGGGTCTGATCC
Downstream 100 bases:
>100_bases CGATCTTTCATTCGACGGGGGCGGCGGGTTGGGCAACAATCCGCCGCCCCTTTTTTCTTGGAGAAGTGCCATGGGTGATT GCCTGGATTTCTACGTGGAT
Product: universal stress protein UspA-like nucleotide-binding protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MAIKEILVHVEPDAAGAGRLDLARMLAAEHGARLVGVGEGDLAPEGVDEWRPISGVKQLALHARYADLTIVGQAASGSSD HVTETVMSVGRPLLAVPRHGRFPSVGRRVLVAWNQSREATRAVFDALPLLAGASSVTVMTMDAEDGDGRVAGADIGLTLA RHGIKVDILRSTSGDIDAGNALLSRAAEQGADLLIMGAFGHSPLREKVLGGATRHILDHMTVPVLLSH
Sequences:
>Translated_228_residues MAIKEILVHVEPDAAGAGRLDLARMLAAEHGARLVGVGEGDLAPEGVDEWRPISGVKQLALHARYADLTIVGQAASGSSD HVTETVMSVGRPLLAVPRHGRFPSVGRRVLVAWNQSREATRAVFDALPLLAGASSVTVMTMDAEDGDGRVAGADIGLTLA RHGIKVDILRSTSGDIDAGNALLSRAAEQGADLLIMGAFGHSPLREKVLGGATRHILDHMTVPVLLSH >Mature_227_residues AIKEILVHVEPDAAGAGRLDLARMLAAEHGARLVGVGEGDLAPEGVDEWRPISGVKQLALHARYADLTIVGQAASGSSDH VTETVMSVGRPLLAVPRHGRFPSVGRRVLVAWNQSREATRAVFDALPLLAGASSVTVMTMDAEDGDGRVAGADIGLTLAR HGIKVDILRSTSGDIDAGNALLSRAAEQGADLLIMGAFGHSPLREKVLGGATRHILDHMTVPVLLSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23842; Mature: 23710
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKEILVHVEPDAAGAGRLDLARMLAAEHGARLVGVGEGDLAPEGVDEWRPISGVKQLA CCHHHEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH LHARYADLTIVGQAASGSSDHVTETVMSVGRPLLAVPRHGRFPSVGRRVLVAWNQSREAT HHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCHHHH RAVFDALPLLAGASSVTVMTMDAEDGDGRVAGADIGLTLARHGIKVDILRSTSGDIDAGN HHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHCCEEEEEEECCCCCCCCHH ALLSRAAEQGADLLIMGAFGHSPLREKVLGGATRHILDHMTVPVLLSH HHHHHHHHCCCCEEEEECCCCCHHHHHHHCHHHHHHHHHCCCEEEECC >Mature Secondary Structure AIKEILVHVEPDAAGAGRLDLARMLAAEHGARLVGVGEGDLAPEGVDEWRPISGVKQLA CHHHEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH LHARYADLTIVGQAASGSSDHVTETVMSVGRPLLAVPRHGRFPSVGRRVLVAWNQSREAT HHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCHHHH RAVFDALPLLAGASSVTVMTMDAEDGDGRVAGADIGLTLARHGIKVDILRSTSGDIDAGN HHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHCCEEEEEEECCCCCCCCHH ALLSRAAEQGADLLIMGAFGHSPLREKVLGGATRHILDHMTVPVLLSH HHHHHHHHCCCCEEEEECCCCCHHHHHHHCHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA