| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311667
Identifier: 83311667
GI number: 83311667
Start: 2751701
End: 2752177
Strand: Reverse
Name: 83311667
Synonym: amb2568
Alternate gene names: NA
Gene position: 2752177-2751701 (Counterclockwise)
Preceding gene: 315111546
Following gene: 83311666
Centisome position: 55.41
GC content: 65.41
Gene sequence:
>477_bases ATGTCGTCCAAGTGGTTGACGATGCTTGTCCTGGCTCTTGGCCTTGCCGCCTGCACGCCGTCCGAATTCGCCGAGCCGCC CGAGGTGGTGCTGGTCTCCATGGTGCCGATGGATGTCTCGCTGATGGAGCAGCGCCTTGCCGTGACGCTGCGGGTGCGCA ATCCCAATAACGTTCCCATGAGCGTCGATGGAATGCGCTTTGCCATCGACGTCAACGGCAAGACCTTCGCCAAGGGCACC AGCGACAAGGCGGTGACTGTGCCGCGCCTGGGCGAGGCGGAGGTGGAGGGCACGGCCCATGTCTCCACCACCGATCTGGT GCGTCAGGTTCTGGGCGCCCCGGCTTCCTCGGGCCTGGCCTACCGCATGTCGGGGACCTTGTTTCTGGCCGGCGCGGGCG GGCGCAGCGCCGGCTTCGAGACCAATGGCGATTTCGACTTTGCCTCGGCCCTGGGTGGTGCCGCCAAGAAGAATTGA
Upstream 100 bases:
>100_bases GCGAAGTGGAATTGGGCCTCAAATCCAACATCACCCTTTCGCCCAAATTCATGGGTTCTCTGCGCAGCATTCCCGGCATC GCCGAGGTGGAGGAAATCTG
Downstream 100 bases:
>100_bases CGCGGCAATGGGGCGAAGGCAGTTTGTCATCCCGAGCCAAGGCGAGGGATCTCCGCCTGATCCGATGGTGCCGATTCTGA CCCGATATGCCAGGAGGGGA
Product: secreted protein
Products: NA
Alternate protein names: Lipoprotein; Secreted Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSSKWLTMLVLALGLAACTPSEFAEPPEVVLVSMVPMDVSLMEQRLAVTLRVRNPNNVPMSVDGMRFAIDVNGKTFAKGT SDKAVTVPRLGEAEVEGTAHVSTTDLVRQVLGAPASSGLAYRMSGTLFLAGAGGRSAGFETNGDFDFASALGGAAKKN
Sequences:
>Translated_158_residues MSSKWLTMLVLALGLAACTPSEFAEPPEVVLVSMVPMDVSLMEQRLAVTLRVRNPNNVPMSVDGMRFAIDVNGKTFAKGT SDKAVTVPRLGEAEVEGTAHVSTTDLVRQVLGAPASSGLAYRMSGTLFLAGAGGRSAGFETNGDFDFASALGGAAKKN >Mature_157_residues SSKWLTMLVLALGLAACTPSEFAEPPEVVLVSMVPMDVSLMEQRLAVTLRVRNPNNVPMSVDGMRFAIDVNGKTFAKGTS DKAVTVPRLGEAEVEGTAHVSTTDLVRQVLGAPASSGLAYRMSGTLFLAGAGGRSAGFETNGDFDFASALGGAAKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16450; Mature: 16319
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKWLTMLVLALGLAACTPSEFAEPPEVVLVSMVPMDVSLMEQRLAVTLRVRNPNNVPM CCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCHHHHHCEEEEEEEEECCCCCCE SVDGMRFAIDVNGKTFAKGTSDKAVTVPRLGEAEVEGTAHVSTTDLVRQVLGAPASSGLA EECCEEEEEECCCCEEECCCCCCEEECCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEE YRMSGTLFLAGAGGRSAGFETNGDFDFASALGGAAKKN EEECCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure SSKWLTMLVLALGLAACTPSEFAEPPEVVLVSMVPMDVSLMEQRLAVTLRVRNPNNVPM CCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCHHHHHCEEEEEEEEECCCCCCE SVDGMRFAIDVNGKTFAKGTSDKAVTVPRLGEAEVEGTAHVSTTDLVRQVLGAPASSGLA EECCEEEEEECCCCEEECCCCCCEEECCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEE YRMSGTLFLAGAGGRSAGFETNGDFDFASALGGAAKKN EEECCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA