| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311666
Identifier: 83311666
GI number: 83311666
Start: 2749870
End: 2751558
Strand: Reverse
Name: 83311666
Synonym: amb2567
Alternate gene names: NA
Gene position: 2751558-2749870 (Counterclockwise)
Preceding gene: 83311667
Following gene: 83311665
Centisome position: 55.4
GC content: 67.32
Gene sequence:
>1689_bases ATGAACCGTTTCCTCGTCGTTTTCGCCGTCCTCGTCCTGGCCGCTCTCAATGCCGCCGGCTGGTGGTGGTTCAACCGGCC GGTGCCAGTGGAGCTGTCGTTCAACGAGCCGTTCCCTTCGGTGTCCTTCGCGCCGTTCCGCCGGGGCCAGGGGCCCATCA CCAAGATCTACCCGACCTCGGATCAGATCGCCGAGGACATGAAAAGTCTGGTGGGAGTGGCCAGGGGGGTGCGCACCTAT ACCGCCCGCGAGGGGCTGGACGTGGTGCCGGTGCTGGGCCGCAAATACGGGATCGAGGTCACCCATTCGGCGTGGCTGGG CCAGAAGACCGCCATTAACGACGCCGAGGTGGAGGCGCTGATCAAGGCCGCCAACGCCTATCCCGATGTCATCAAGCGGG TGATCGTCGGCAACGAGGTGCTGTTGCGCCAGGATCTGCCGCCCGAGCAGCTGATCGCCTACATCCGCAAGGTCAAGGCG GCGGTGAAGCAGCCGGTGTCGTATGCCGATGTCTGGGCCTTCTGGCTGAAATATCCGGAAGTGGCCAAGGAAGTGGACTT TCTCACCATCCACATCCTGCCCTATTGGGAGGACGAGCCCATCGGCGTCGACGGTGCCGCCAAGCATATCGTCGCCATCT ACCAGCGCATGGCCAAGGAATTCGGCAAGCCCATCCTGATCGGCGAGGCCGGCTGGCCGACGCGGGGCCGTTCACGCGGG CCGGCGGTGGCCGACATGGAGAACGCGGCGCGGTTCGTGCGCACCCTGGCCCTGGTCTCCAAGGAAAACGGTTTCGACTA CAACGTGGTCGAGGCCTTCGACCAGCCGTGGAAGGCTTTCCTCGAAGGCACGGTGGGCGCCAAATGGGGCGTGGTGGACG AGAACCGCCGGGTCAAATACGCCATGTCCGGCCCGGTGGAGCCCAGCCCCGATTGGCCGCGCCATGCTGCGGCCGCGGTG CTGGTCGGCTCGGCTCTGGCCTTCGCCCTGATGTGGCGGCGGTCCGACCGCTACGGCCTGAAGGGCGGGCTGCTGGTGCT GGTGCTGGCCCAACTGGCCGGGCTGTTCATCACCTGGCAGGCGGTCAATGCTTTGGCCATGGCCTATGACGGGCTGGAAG ACGCCTGGGCCTGGGCGCGCATCGCCCTGCATGCGGCGCTGTCCGTCACCCTGGCCTGGGCGGCGTCCCTGCAGTTCCGG CGCGAGCCCGGCGAGGTGAACTGGCCCTGGGCCGAGAAGCTGATGCCCATCTACGGCTTCGCCGCCATCGTGGTGGGCGC CACCCTGCTGGTCCATGGCCGCTACCGCGACATTCCCCCCATCGAGTTCCTGACTCCGTGCATCGGGCTGACCCTTTACG CCCTGGGCCGCATGGCGGTTCAAGGCAAGGCATGGGACGAGGCCTTCGCCATCGGCCGGCTGTTCGGCGGCGACGGCTTC GCCATGGCAAGGCGCTTCGTCATCGGCCTTGGCCTTTCGGCCCTGGCGGCGCCGCTGTCCGAGGCCTGGGCCCTGTCGCG CGGCGACGATTTCATCACCTCGCACCCCCTGTGGTCCGACCGCATCCCGCTACTGGTCCGGGCCTTGTGGGAGAACCAGG AGATGGTGGTGTGGGCCGCCATGGTCGTGGTGATGATCCTGCCGTTCTGGGCGGAGGCGCGGCTGCAATCGCGTCGGGCG GCGCGGTGA
Upstream 100 bases:
>100_bases CGAGGGATCTCCGCCTGATCCGATGGTGCCGATTCTGACCCGATATGCCAGGAGGGGATGCCTCCTCCCGCGGGTCGTCG GAATGACAAATAGGTTGTAG
Downstream 100 bases:
>100_bases ACGCCCCGACCCTGACGCTGCCGCCCTATCTGGGGCTGGCGTCCACCCGCTACGGGGCCATGCTCTACCCCGTCGGTGAC GTTTGGGTTGGGCGCTCTCT
Product: exo-beta-1,3-glucanase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase-Like Protein; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MNRFLVVFAVLVLAALNAAGWWWFNRPVPVELSFNEPFPSVSFAPFRRGQGPITKIYPTSDQIAEDMKSLVGVARGVRTY TAREGLDVVPVLGRKYGIEVTHSAWLGQKTAINDAEVEALIKAANAYPDVIKRVIVGNEVLLRQDLPPEQLIAYIRKVKA AVKQPVSYADVWAFWLKYPEVAKEVDFLTIHILPYWEDEPIGVDGAAKHIVAIYQRMAKEFGKPILIGEAGWPTRGRSRG PAVADMENAARFVRTLALVSKENGFDYNVVEAFDQPWKAFLEGTVGAKWGVVDENRRVKYAMSGPVEPSPDWPRHAAAAV LVGSALAFALMWRRSDRYGLKGGLLVLVLAQLAGLFITWQAVNALAMAYDGLEDAWAWARIALHAALSVTLAWAASLQFR REPGEVNWPWAEKLMPIYGFAAIVVGATLLVHGRYRDIPPIEFLTPCIGLTLYALGRMAVQGKAWDEAFAIGRLFGGDGF AMARRFVIGLGLSALAAPLSEAWALSRGDDFITSHPLWSDRIPLLVRALWENQEMVVWAAMVVVMILPFWAEARLQSRRA AR
Sequences:
>Translated_562_residues MNRFLVVFAVLVLAALNAAGWWWFNRPVPVELSFNEPFPSVSFAPFRRGQGPITKIYPTSDQIAEDMKSLVGVARGVRTY TAREGLDVVPVLGRKYGIEVTHSAWLGQKTAINDAEVEALIKAANAYPDVIKRVIVGNEVLLRQDLPPEQLIAYIRKVKA AVKQPVSYADVWAFWLKYPEVAKEVDFLTIHILPYWEDEPIGVDGAAKHIVAIYQRMAKEFGKPILIGEAGWPTRGRSRG PAVADMENAARFVRTLALVSKENGFDYNVVEAFDQPWKAFLEGTVGAKWGVVDENRRVKYAMSGPVEPSPDWPRHAAAAV LVGSALAFALMWRRSDRYGLKGGLLVLVLAQLAGLFITWQAVNALAMAYDGLEDAWAWARIALHAALSVTLAWAASLQFR REPGEVNWPWAEKLMPIYGFAAIVVGATLLVHGRYRDIPPIEFLTPCIGLTLYALGRMAVQGKAWDEAFAIGRLFGGDGF AMARRFVIGLGLSALAAPLSEAWALSRGDDFITSHPLWSDRIPLLVRALWENQEMVVWAAMVVVMILPFWAEARLQSRRA AR >Mature_562_residues MNRFLVVFAVLVLAALNAAGWWWFNRPVPVELSFNEPFPSVSFAPFRRGQGPITKIYPTSDQIAEDMKSLVGVARGVRTY TAREGLDVVPVLGRKYGIEVTHSAWLGQKTAINDAEVEALIKAANAYPDVIKRVIVGNEVLLRQDLPPEQLIAYIRKVKA AVKQPVSYADVWAFWLKYPEVAKEVDFLTIHILPYWEDEPIGVDGAAKHIVAIYQRMAKEFGKPILIGEAGWPTRGRSRG PAVADMENAARFVRTLALVSKENGFDYNVVEAFDQPWKAFLEGTVGAKWGVVDENRRVKYAMSGPVEPSPDWPRHAAAAV LVGSALAFALMWRRSDRYGLKGGLLVLVLAQLAGLFITWQAVNALAMAYDGLEDAWAWARIALHAALSVTLAWAASLQFR REPGEVNWPWAEKLMPIYGFAAIVVGATLLVHGRYRDIPPIEFLTPCIGLTLYALGRMAVQGKAWDEAFAIGRLFGGDGF AMARRFVIGLGLSALAAPLSEAWALSRGDDFITSHPLWSDRIPLLVRALWENQEMVVWAAMVVVMILPFWAEARLQSRRA AR
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321718, Length=173, Percent_Identity=27.1676300578035, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62361; Mature: 62361
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00587 GLYCOSYL_HYDROL_F17
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFLVVFAVLVLAALNAAGWWWFNRPVPVELSFNEPFPSVSFAPFRRGQGPITKIYPTS CCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCH DQIAEDMKSLVGVARGVRTYTAREGLDVVPVLGRKYGIEVTHSAWLGQKTAINDAEVEAL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEHHHHCCCCCCCCHHHHHHH IKAANAYPDVIKRVIVGNEVLLRQDLPPEQLIAYIRKVKAAVKQPVSYADVWAFWLKYPE HHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH VAKEVDFLTIHILPYWEDEPIGVDGAAKHIVAIYQRMAKEFGKPILIGEAGWPTRGRSRG HHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC PAVADMENAARFVRTLALVSKENGFDYNVVEAFDQPWKAFLEGTVGAKWGVVDENRRVKY CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCEECCCCEEEE AMSGPVEPSPDWPRHAAAAVLVGSALAFALMWRRSDRYGLKGGLLVLVLAQLAGLFITWQ EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEHHH AVNALAMAYDGLEDAWAWARIALHAALSVTLAWAASLQFRREPGEVNWPWAEKLMPIYGF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH AAIVVGATLLVHGRYRDIPPIEFLTPCIGLTLYALGRMAVQGKAWDEAFAIGRLFGGDGF HHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH AMARRFVIGLGLSALAAPLSEAWALSRGDDFITSHPLWSDRIPLLVRALWENQEMVVWAA HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH MVVVMILPFWAEARLQSRRAAR HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNRFLVVFAVLVLAALNAAGWWWFNRPVPVELSFNEPFPSVSFAPFRRGQGPITKIYPTS CCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCH DQIAEDMKSLVGVARGVRTYTAREGLDVVPVLGRKYGIEVTHSAWLGQKTAINDAEVEAL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEHHHHCCCCCCCCHHHHHHH IKAANAYPDVIKRVIVGNEVLLRQDLPPEQLIAYIRKVKAAVKQPVSYADVWAFWLKYPE HHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH VAKEVDFLTIHILPYWEDEPIGVDGAAKHIVAIYQRMAKEFGKPILIGEAGWPTRGRSRG HHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC PAVADMENAARFVRTLALVSKENGFDYNVVEAFDQPWKAFLEGTVGAKWGVVDENRRVKY CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCEECCCCEEEE AMSGPVEPSPDWPRHAAAAVLVGSALAFALMWRRSDRYGLKGGLLVLVLAQLAGLFITWQ EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEHHH AVNALAMAYDGLEDAWAWARIALHAALSVTLAWAASLQFRREPGEVNWPWAEKLMPIYGF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH AAIVVGATLLVHGRYRDIPPIEFLTPCIGLTLYALGRMAVQGKAWDEAFAIGRLFGGDGF HHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH AMARRFVIGLGLSALAAPLSEAWALSRGDDFITSHPLWSDRIPLLVRALWENQEMVVWAA HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH MVVVMILPFWAEARLQSRRAAR HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA