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The map label for this gene is rsmC [H]

Identifier: 83311577

GI number: 83311577

Start: 2656956

End: 2657900

Strand: Reverse

Name: rsmC [H]

Synonym: amb2478

Alternate gene names: 83311577

Gene position: 2657900-2656956 (Counterclockwise)

Preceding gene: 83311578

Following gene: 83311576

Centisome position: 53.51

GC content: 68.15

Gene sequence:

>945_bases
ATGCGGGCCGAGCCTCACGAGGCGCTGTGGGACGAGTGGCGATCCCGTCTGGTGTGCGAACAGGGCTTCAAGCCCACCTT
CGACCGACTGATCCAGGTCGGATTCGAGACCGTGGCGCGGCTGGAAGGCCGTTTTGCCGCCGGTCTGGTGTTGCTGACCA
AGCACAAGGCCGAGAACCGGGCCAATCTGGCGCGGGCCTGGGGGCTGCTGGAGCCGGGCGGCGTACTGGTGTGCTGCGGC
GCCAATGCCCTGGGGGCGGCCAGTCACGAGCGCGAAGCCGAGCGGGTGTTCGGCCTTGCCGGCTCGCTGTCCAAGCATCA
GGCCCGGACCTTCTGGATGGTGCGCGGCACCGACTCGCCCCCCGCCGACTGCGCGGAATGGCTGGCCGCGGCCGAGCCCA
GGCCGGTGGAAGGCTGCGGCCTCGTGGCCCGCGCCGGCTGTTTCAGCAGCGATCACGTGGACAAGGGGTCGCGGCTGCTG
CTGGACTGCCTGCCCGAAGGACTGGCCGGACGGGGCGCCGATCTGGGGGCGGGATGGGGATATCTCTCGGCCGAGATCCT
GCGCCGTTTTCCCGAGGTCACCGACATCGACCTGTTCGAGGCGGAGGCCCTGGCCCTGGAAGATGCGCGCAGCAATCTGG
GCGGCAGTGAAAAGGCGGCTTTCCACTGGCTCGATGTGGGCGCCGGCCTACCCAAATGCGAACCCTATGACTGGATCGTC
AGCAATCCGCCCTTCCACGAGGGGCGCAAGGCCGATCCGGCTATCGGCCAGGGCTTCATCACCGCCGCCTGGAAGGCCAT
CCGGCGGCGCGGCAAGTTCATCCTGGTGGCCAATCGCAGCCTGCCTTACGAGGCCGAACTGCGCCGCCGTTTCCGCGAAG
TGACGCTGCTGCGCGAGGCCGACGGCTTTAAGGTCTATCTGGCCAGCAACCGCCATGACAAATAA

Upstream 100 bases:

>100_bases
TCATGCTACACCGCCGGTCATGAACGATTCCAAGATCATCGACGCCCTGCTGCTGCCCTTCGAGCGCGACCTGCTGCCTC
TGCCCCGGCGCGCCTTCCTC

Downstream 100 bases:

>100_bases
TGACGATCACCGACAAGCCGCAGAAGCTAAGAGATGCGGCACGCATCCCGCCCGGCGCCTGAGGGGCATACGGATATGCG
CCTGATCCGCCTCATCGCCA

Product: 16S RNA G1207 methylase RsmC

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRAEPHEALWDEWRSRLVCEQGFKPTFDRLIQVGFETVARLEGRFAAGLVLLTKHKAENRANLARAWGLLEPGGVLVCCG
ANALGAASHEREAERVFGLAGSLSKHQARTFWMVRGTDSPPADCAEWLAAAEPRPVEGCGLVARAGCFSSDHVDKGSRLL
LDCLPEGLAGRGADLGAGWGYLSAEILRRFPEVTDIDLFEAEALALEDARSNLGGSEKAAFHWLDVGAGLPKCEPYDWIV
SNPPFHEGRKADPAIGQGFITAAWKAIRRRGKFILVANRSLPYEAELRRRFREVTLLREADGFKVYLASNRHDK

Sequences:

>Translated_314_residues
MRAEPHEALWDEWRSRLVCEQGFKPTFDRLIQVGFETVARLEGRFAAGLVLLTKHKAENRANLARAWGLLEPGGVLVCCG
ANALGAASHEREAERVFGLAGSLSKHQARTFWMVRGTDSPPADCAEWLAAAEPRPVEGCGLVARAGCFSSDHVDKGSRLL
LDCLPEGLAGRGADLGAGWGYLSAEILRRFPEVTDIDLFEAEALALEDARSNLGGSEKAAFHWLDVGAGLPKCEPYDWIV
SNPPFHEGRKADPAIGQGFITAAWKAIRRRGKFILVANRSLPYEAELRRRFREVTLLREADGFKVYLASNRHDK
>Mature_314_residues
MRAEPHEALWDEWRSRLVCEQGFKPTFDRLIQVGFETVARLEGRFAAGLVLLTKHKAENRANLARAWGLLEPGGVLVCCG
ANALGAASHEREAERVFGLAGSLSKHQARTFWMVRGTDSPPADCAEWLAAAEPRPVEGCGLVARAGCFSSDHVDKGSRLL
LDCLPEGLAGRGADLGAGWGYLSAEILRRFPEVTDIDLFEAEALALEDARSNLGGSEKAAFHWLDVGAGLPKCEPYDWIV
SNPPFHEGRKADPAIGQGFITAAWKAIRRRGKFILVANRSLPYEAELRRRFREVTLLREADGFKVYLASNRHDK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=260, Percent_Identity=30, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87082206, Length=169, Percent_Identity=26.0355029585799, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 34576; Mature: 34576

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEPHEALWDEWRSRLVCEQGFKPTFDRLIQVGFETVARLEGRFAAGLVLLTKHKAENR
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCHH
ANLARAWGLLEPGGVLVCCGANALGAASHEREAERVFGLAGSLSKHQARTFWMVRGTDSP
HHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
PADCAEWLAAAEPRPVEGCGLVARAGCFSSDHVDKGSRLLLDCLPEGLAGRGADLGAGWG
HHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCH
YLSAEILRRFPEVTDIDLFEAEALALEDARSNLGGSEKAAFHWLDVGAGLPKCEPYDWIV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCEEC
SNPPFHEGRKADPAIGQGFITAAWKAIRRRGKFILVANRSLPYEAELRRRFREVTLLREA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHEEC
DGFKVYLASNRHDK
CCEEEEEECCCCCC
>Mature Secondary Structure
MRAEPHEALWDEWRSRLVCEQGFKPTFDRLIQVGFETVARLEGRFAAGLVLLTKHKAENR
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCHH
ANLARAWGLLEPGGVLVCCGANALGAASHEREAERVFGLAGSLSKHQARTFWMVRGTDSP
HHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
PADCAEWLAAAEPRPVEGCGLVARAGCFSSDHVDKGSRLLLDCLPEGLAGRGADLGAGWG
HHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCH
YLSAEILRRFPEVTDIDLFEAEALALEDARSNLGGSEKAAFHWLDVGAGLPKCEPYDWIV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCEEC
SNPPFHEGRKADPAIGQGFITAAWKAIRRRGKFILVANRSLPYEAELRRRFREVTLLREA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHEEC
DGFKVYLASNRHDK
CCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA