| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311526
Identifier: 83311526
GI number: 83311526
Start: 2612115
End: 2612612
Strand: Reverse
Name: 83311526
Synonym: amb2427
Alternate gene names: NA
Gene position: 2612612-2612115 (Counterclockwise)
Preceding gene: 83311527
Following gene: 83311525
Centisome position: 52.6
GC content: 67.67
Gene sequence:
>498_bases ATGCTGGTCCGTCTGATCGGCTTCGGCATCCTCGCCTATGGAGTTTACATGCTGACCTCGCAGCAGGCCCGCACGGCCAT CATTTCCAGCTACGACACCATGCCGGAGCCCGACGCCGATGTTGACGTCGTCGCCCGCACCATCTGGGGCGAGGCGCGAG GCGAGGGCGTTACCGGCATGACCGCCGTCGCCAACGTCATCGCCAACCGGGTCGCCCACCCGGGATGGTGGGGCAGGGGG TGGCGCGGCGTCTGCCTCGCGCCCTACCAGTTCAGCGCCTGGAACGCCAATGACCCCAATCTGGTCAAGCTCTCCACCGT CACCACGGCAGACCCCTCGTTCGCGGCCGCCGTGGAGATCGCCGCGGGGGCCGTCTACGGCACCCTGGCCGACATCACCG GCGGCGCCACCCATTACCACACCCTCAACATCCATCCGGCCTGGGCGGACGAACTGACCCAGACCGCCCGCATCGGGAGC CATGTCTTCTATGCCTGA
Upstream 100 bases:
>100_bases GGTATCTGGCTGCAGTGCAAGTGAGGTCGATCATGCCCCCCATGCCCATTCGCCCCGGCGAAAACCCCATCCCCGACGAT TTCCGCCCCCCGGTGCCCGA
Downstream 100 bases:
>100_bases GCTTCTCCAGGCCATCCAAGCGGGTGGCAACGTGGCACTGGTGGCGATTGCCTTCGCCATCTATCGCATCGAGATGAAGC TGGTTCGTCTCGAAACCAAG
Product: cell wall hydrolyses involved in spore germination
Products: NA
Alternate protein names: Cell Wall Hydrolyses Involved In Spore Germination; Cell Wall Hydrolyse; Cell Wall Hydrolyses
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLVRLIGFGILAYGVYMLTSQQARTAIISSYDTMPEPDADVDVVARTIWGEARGEGVTGMTAVANVIANRVAHPGWWGRG WRGVCLAPYQFSAWNANDPNLVKLSTVTTADPSFAAAVEIAAGAVYGTLADITGGATHYHTLNIHPAWADELTQTARIGS HVFYA
Sequences:
>Translated_165_residues MLVRLIGFGILAYGVYMLTSQQARTAIISSYDTMPEPDADVDVVARTIWGEARGEGVTGMTAVANVIANRVAHPGWWGRG WRGVCLAPYQFSAWNANDPNLVKLSTVTTADPSFAAAVEIAAGAVYGTLADITGGATHYHTLNIHPAWADELTQTARIGS HVFYA >Mature_165_residues MLVRLIGFGILAYGVYMLTSQQARTAIISSYDTMPEPDADVDVVARTIWGEARGEGVTGMTAVANVIANRVAHPGWWGRG WRGVCLAPYQFSAWNANDPNLVKLSTVTTADPSFAAAVEIAAGAVYGTLADITGGATHYHTLNIHPAWADELTQTARIGS HVFYA
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17638; Mature: 17638
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRLIGFGILAYGVYMLTSQQARTAIISSYDTMPEPDADVDVVARTIWGEARGEGVTGM CEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH TAVANVIANRVAHPGWWGRGWRGVCLAPYQFSAWNANDPNLVKLSTVTTADPSFAAAVEI HHHHHHHHHHHCCCCCCCCCCCCEEECCEEECCCCCCCCCEEEEEEEECCCCCHHHHHHH AAGAVYGTLADITGGATHYHTLNIHPAWADELTQTARIGSHVFYA HHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCEECCC >Mature Secondary Structure MLVRLIGFGILAYGVYMLTSQQARTAIISSYDTMPEPDADVDVVARTIWGEARGEGVTGM CEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH TAVANVIANRVAHPGWWGRGWRGVCLAPYQFSAWNANDPNLVKLSTVTTADPSFAAAVEI HHHHHHHHHHHCCCCCCCCCCCCEEECCEEECCCCCCCCCEEEEEEEECCCCCHHHHHHH AAGAVYGTLADITGGATHYHTLNIHPAWADELTQTARIGSHVFYA HHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA