| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83311527
Identifier: 83311527
GI number: 83311527
Start: 2612689
End: 2613621
Strand: Reverse
Name: 83311527
Synonym: amb2428
Alternate gene names: NA
Gene position: 2613621-2612689 (Counterclockwise)
Preceding gene: 83311528
Following gene: 83311526
Centisome position: 52.62
GC content: 67.2
Gene sequence:
>933_bases ATGGGCATCCTGCCCCCCAACCTCCGCCCCGACATCGAAGCTCTGCGGGTGGACATGGCCGTCGCCAATCTGCGGGACGC GGTCAAGGACGGCTGGTCCGTCCTGGCCCTGTCAACCGGCATGGTTGACGCTTTCACCGATCAGACGGGAATCGCCAGCC TGGGCGGGGCGACATGGGCGTCGGGGGCTCTGTCAAATCGGTCGGCGGCCACGGTCGGCAATACTCGCGCAACGGACGGG TCGCCGGGGGCTTCGTGGACTTACACCGATCGGGCGTATTCGATCCCCAACGGCGTCACGGTGTCGTCGGTGGGCATCTG GTCCAACGCGACCAGCGGCAATGGTACGCTCTACATCATGGAGCGGGTGGGGGCGGGCAGCTACGTGGTGCGGGCCAGTC AGGCGATCACGTTCACGGCGACAGGCTGGCTCGACGTCGCGCTGTCATATGTCGTCCCAGGCAGCAGCACGTTCTACGTC GGCGCGTGGGTGAACAATGCCAGCGTCGGAGTTACCCCGAGCGGAGCGTTTGCCACCTATAACGGGCAGGCGTCGGGCAG TTTTTCGGCGTCCGAAACCACGGGGTCGATGCACACCACGCGGGTGACCTATAGCGGATCGCCGGGGGCTGTGACGGTGG TGTCTGGTGCCTTCGCCCTCGGCTTTCAGCCCTCCGTGGCGCGCATCGTCTCGCCGGTCGAGTTGGGTGGCGGTGCCATC GGCACGGACTGCTTGCTTGACCTGTCCCGCGACGGCGCGGCCTGGGCGGCGGTGCCGCTGTCCGACCTGGGGAAATTCGA CGCCTCGACGCGCATCGTGGGCGGACTGGTGAGCCTCGCCGGCCAGCCAGCCGGGTCGAGCATCTATTGGCGCTGGCGCG CAACGGCCGCCTACGCCGGGAAAAACCACGGTATCTGGCTGCAGTGCAAGTGA
Upstream 100 bases:
>100_bases GGCCGGGGGAGGGGTTCACCTTCGAAGGCACCACCGGAGCCGTCTATGCCATCGCCAGCGCCGCCGGAACGGACGTGCGC ATCCTGGCGGAGGGCTGATC
Downstream 100 bases:
>100_bases GGTCGATCATGCCCCCCATGCCCATTCGCCCCGGCGAAAACCCCATCCCCGACGATTTCCGCCCCCCGGTGCCCGAATGC TGGTCCGTCTGATCGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGILPPNLRPDIEALRVDMAVANLRDAVKDGWSVLALSTGMVDAFTDQTGIASLGGATWASGALSNRSAATVGNTRATDG SPGASWTYTDRAYSIPNGVTVSSVGIWSNATSGNGTLYIMERVGAGSYVVRASQAITFTATGWLDVALSYVVPGSSTFYV GAWVNNASVGVTPSGAFATYNGQASGSFSASETTGSMHTTRVTYSGSPGAVTVVSGAFALGFQPSVARIVSPVELGGGAI GTDCLLDLSRDGAAWAAVPLSDLGKFDASTRIVGGLVSLAGQPAGSSIYWRWRATAAYAGKNHGIWLQCK
Sequences:
>Translated_310_residues MGILPPNLRPDIEALRVDMAVANLRDAVKDGWSVLALSTGMVDAFTDQTGIASLGGATWASGALSNRSAATVGNTRATDG SPGASWTYTDRAYSIPNGVTVSSVGIWSNATSGNGTLYIMERVGAGSYVVRASQAITFTATGWLDVALSYVVPGSSTFYV GAWVNNASVGVTPSGAFATYNGQASGSFSASETTGSMHTTRVTYSGSPGAVTVVSGAFALGFQPSVARIVSPVELGGGAI GTDCLLDLSRDGAAWAAVPLSDLGKFDASTRIVGGLVSLAGQPAGSSIYWRWRATAAYAGKNHGIWLQCK >Mature_309_residues GILPPNLRPDIEALRVDMAVANLRDAVKDGWSVLALSTGMVDAFTDQTGIASLGGATWASGALSNRSAATVGNTRATDGS PGASWTYTDRAYSIPNGVTVSSVGIWSNATSGNGTLYIMERVGAGSYVVRASQAITFTATGWLDVALSYVVPGSSTFYVG AWVNNASVGVTPSGAFATYNGQASGSFSASETTGSMHTTRVTYSGSPGAVTVVSGAFALGFQPSVARIVSPVELGGGAIG TDCLLDLSRDGAAWAAVPLSDLGKFDASTRIVGGLVSLAGQPAGSSIYWRWRATAAYAGKNHGIWLQCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31655; Mature: 31523
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILPPNLRPDIEALRVDMAVANLRDAVKDGWSVLALSTGMVDAFTDQTGIASLGGATWA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCHHCCCCHHC SGALSNRSAATVGNTRATDGSPGASWTYTDRAYSIPNGVTVSSVGIWSNATSGNGTLYIM CCCCCCCCEEECCCCCCCCCCCCCCEEECCCEEECCCCCEEEEEEEECCCCCCCCEEEEE ERVGAGSYVVRASQAITFTATGWLDVALSYVVPGSSTFYVGAWVNNASVGVTPSGAFATY EECCCCEEEEEECCEEEEEECCHHHEEEEEEECCCCEEEEEEEECCCEEECCCCCCEEEE NGQASGSFSASETTGSMHTTRVTYSGSPGAVTVVSGAFALGFQPSVARIVSPVELGGGAI CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECEEEECCCCCHHHHCCCHHHCCCCC GTDCLLDLSRDGAAWAAVPLSDLGKFDASTRIVGGLVSLAGQPAGSSIYWRWRATAAYAG CCCEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECC KNHGIWLQCK CCCCEEEEEC >Mature Secondary Structure GILPPNLRPDIEALRVDMAVANLRDAVKDGWSVLALSTGMVDAFTDQTGIASLGGATWA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCHHCCCCHHC SGALSNRSAATVGNTRATDGSPGASWTYTDRAYSIPNGVTVSSVGIWSNATSGNGTLYIM CCCCCCCCEEECCCCCCCCCCCCCCEEECCCEEECCCCCEEEEEEEECCCCCCCCEEEEE ERVGAGSYVVRASQAITFTATGWLDVALSYVVPGSSTFYVGAWVNNASVGVTPSGAFATY EECCCCEEEEEECCEEEEEECCHHHEEEEEEECCCCEEEEEEEECCCEEECCCCCCEEEE NGQASGSFSASETTGSMHTTRVTYSGSPGAVTVVSGAFALGFQPSVARIVSPVELGGGAI CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECEEEECCCCCHHHHCCCHHHCCCCC GTDCLLDLSRDGAAWAAVPLSDLGKFDASTRIVGGLVSLAGQPAGSSIYWRWRATAAYAG CCCEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECC KNHGIWLQCK CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA