| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311426
Identifier: 83311426
GI number: 83311426
Start: 2529832
End: 2531046
Strand: Reverse
Name: 83311426
Synonym: amb2327
Alternate gene names: NA
Gene position: 2531046-2529832 (Counterclockwise)
Preceding gene: 83311427
Following gene: 83311425
Centisome position: 50.96
GC content: 63.79
Gene sequence:
>1215_bases ATGGTGATGAAGAGGCTTCTGCTCGGCGCCGCGGCGCTGGCCCTGTCCACCGGCATGGCGCATGCCCAGTACAGCGACGG CAAGGTCAAGATCGGCGTGCTCACCGACCTGTCGGGAACCTATTCCGATCTGGCCGGCAAGGGCACCATCGTCGCGGCCC AGATGGCCATCGACGATTTCGGCGGCAAGCTCAACGGCCAGCCCATCGAGCTGATCTCCGCCGACCACCAGAACAAGGCC GACATCGCCTCGGGCATCGCCCGCAAGTGGTACGACACCGAGCAGGTCGACGCCATCGCCGAGCTGGTGACCACCGCGGC AGCCATCGCGGTGCGCGAGGTCTCCAAGGAGAAGGGCAAGATCGATCTGGTCTCGGGCGCCGCCTCGACGCCGCTGACCA ACGACAAGTGCTCGGCCACCGGCTTCCACTGGACCTACGACACCTACGCCCTGGCCAACGGCACCGGTGACGCCGTGGTG AAGAACGGCGGCAAGACCTGGTTCTTCCTGACCGCCGACTATGCCTTCGGCCACAACCTCCAGGCCCAGACCGAGAAGGT GGTTAAGGCCAATGGCGGCACGGTCAAGGGATCGGTGAAGCATCCCTTCCCCAATTCCGATTTCTCGTCCTTCCTGCTGC AGGCCCAGTCGTCGGGCGCCCAGATCATCGGTCTGGCCAATGCCGGCGCCGACACCATCAACGCCATCAAGCAGGCCAAG GAATTCGGCATTACCCAGGCGGGCCAGTCCCTGGCCGGCCTCCTGGTGTTCATCACCGACGTGCATTCGCTCGGCCTGGA GAACGCCCAGGGCATGATGCTGACCACCGGCTTCTACTGGGACATGGATGACCAGACCCGGGCGTGGTCCAAGCGCTGGT CCGAGAAGATGGGCGGCGGCAAGATGCCGTCCATGGTTCATGCCGGCACATATTCCCAGGTTCTGCACTACCTGAGGGCC GCCGCCGCCGCCAAGACCGACGAGGGCATCAAGGTGGCCGACGAGATGCGCAAGCTGCCCATCAACGACTTCTTCGCCAA GAACGGCAAGATCCGTGCCGATGGCCGCATGGTCCACGACATGTATCTGGCCCAGGTCAAGAAGCCGTCGGAGTCCAAGG GTCCCTGGGACTATTACAAGATCATCCGCACCATTCCGGGCGACACGGCCTATCAGCCGCTGTCCGAAAGCACTTGCCCG CTGGTAAAGAAGTAA
Upstream 100 bases:
>100_bases GCACGGGCAGGTGATCGACATGATCCCCAACGAATCCCTGGCGGCCAACATGGACAAGCTGAAGAGCTATCTCGGCGTTT AACTAACGGGAGGACCAATC
Downstream 100 bases:
>100_bases GGAACCGGGTCGGGACGCCGGGGTAATCCGGCGTCCCGTCCTGCTCAGGGGGAGCCCAGACCGCCATGATGACCATTCTC GGCATACCGACCCAGGCCCT
Product: ABC-type branched-chain amino acid transport systems, periplasmic component
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; Plasmid Encoded RepA Protein; ABC Transporter Periplasmic Protein; ABC Transporter Subunit
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLNGQPIELISADHQNKA DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGKIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVV KNGGKTWFFLTADYAFGHNLQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKMPSMVHAGTYSQVLHYLRA AAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCP LVKK
Sequences:
>Translated_404_residues MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLNGQPIELISADHQNKA DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGKIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVV KNGGKTWFFLTADYAFGHNLQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKMPSMVHAGTYSQVLHYLRA AAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCP LVKK >Mature_404_residues MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLNGQPIELISADHQNKA DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGKIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVV KNGGKTWFFLTADYAFGHNLQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKMPSMVHAGTYSQVLHYLRA AAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCP LVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43289; Mature: 43289
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDF CHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHHCCCCEEEEEEEEHHHC GGKLNGQPIELISADHQNKADIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGK CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVVKNGGKTWFFLTADYAFGHNL EEEECCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC QAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGG HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC KMPSMVHAGTYSQVLHYLRAAAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHD CCCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCEEEECCCHHHH MYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCPLVKK HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDF CHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHHCCCCEEEEEEEEHHHC GGKLNGQPIELISADHQNKADIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGK CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVVKNGGKTWFFLTADYAFGHNL EEEECCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC QAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGG HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC KMPSMVHAGTYSQVLHYLRAAAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHD CCCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCEEEECCCHHHH MYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCPLVKK HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA