| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ttuD [H]
Identifier: 83311387
GI number: 83311387
Start: 2489718
End: 2490821
Strand: Reverse
Name: ttuD [H]
Synonym: amb2288
Alternate gene names: 83311387
Gene position: 2490821-2489718 (Counterclockwise)
Preceding gene: 83311389
Following gene: 83311386
Centisome position: 50.15
GC content: 71.01
Gene sequence:
>1104_bases ATGGCCCGCGCCGTGGAGGACCATTGGCAAGGGCCGCTGTCCGGCCTGGTGGTCACCCGCTATGGCCATTGCGTCCCCAC CCGGCGAATCGAGGTGGTGGAGGCCGCCCATCCGGTCCCCGACGCGGCGGGCGAGCACGCCGCCGGCCGCATGATGGACC TGCTGGCCGGCGTGGGAGCGGACGATCTGGTGCTGTGCCTGATCTCGGGCGGCGGTTCGGCCCTGCTGGCCCGCCCGGCC GAGGGCATCACCCTGGCCGAGAAGCAGGCCCTGACCGGGGCCTTGCTGCGCTCGGGCGCCGCCATCGGCGAAATCAATTG CGTGCGCAAGCACCTCTCGGCGGTCAAGGGCGGCCGCCTCGCCGCCCTGGCCGCCCCAGCGCGGCTGGTGACCCTGGCCA TTTCCGACGTGCCCGGCGACAACCCGTCGGTGATCGCCTCGGGCCCCACGGTGGCCGATCCCACCACCCTGGCCGAGGCC CGCGCCGTGCTGGCCCGCTATGGCATCGCGCCGCCGCCCGCCATTGCCGCCCGGCTGAACGATCCGGCCGCCGAGACCCC GAAGAGCCTTCCCCCTGGCGAGTACCGCCTGATCGCCACGCCGCAGCGCTCGCTGGAGGCCGCCGCCCTGGTGGCGGCGC GGGCTGGTCTGATGCCGCTGCTGCTGGGCGATGCCCTGGAGGGCGAAGCCCGCGAGATGGCCAGGGTGATGGCCGGAATC GTCAAATCCATCCGCGCCCACCAGCAGCCGGTGCCCATGCCGGCGGTGATCCTGTCCGGCGGCGAAGCGACCGTCACCAT CCGGGGCCAGGGCAAGGGCGGCCCCAATGCCGAATTCGCCCTGGCCTTGGCGCTGGCGTTGAAGGACACCCAGGGCGTGG AGGCCATCGCCTGCGACACCGACGGCATCGACGGCTCCGAGGACAATGCCGGCGCGGTCATCACGCCCGACACCGCAGAG AGGGCGCGGGCGTTGGGACTTAACCTTGAGTCTTACCTTAACCAGAACGATTCATACGGATTTTTCAATACGTTGGGCGA CCTTGTTAAGTGCGGGCCGACCCTGACCAACGTCAACGACTTCCGGGCGGTGCTGGTGCGATGA
Upstream 100 bases:
>100_bases GGTCGAAGCGGCCAAGCCTTCCGCCTGCCTGCCGCCCGCCCTTCCCGCTCCGCCGCCCGGCCGCACCCTGGTGATCGGCG CCGGCAAGGCCGCCGCCGCC
Downstream 100 bases:
>100_bases CCCTGCCTTTCGACACGGCCCTGGCGCTGAAACTGGTGCCGCTTTACCTGCTGATGGGCATCGGCTTTCTGCTGGGCCGG TTTTGCGAGGTCAAGGGACA
Product: putative hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGADDLVLCLISGGGSALLARPA EGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRLAALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEA RAVLARYGIAPPPAIAARLNDPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDTDGIDGSEDNAGAVITPDTAE RARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVNDFRAVLVR
Sequences:
>Translated_367_residues MARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGADDLVLCLISGGGSALLARPA EGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRLAALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEA RAVLARYGIAPPPAIAARLNDPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDTDGIDGSEDNAGAVITPDTAE RARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVNDFRAVLVR >Mature_366_residues ARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGADDLVLCLISGGGSALLARPAE GITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRLAALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEAR AVLARYGIAPPPAIAARLNDPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGIV KSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDTDGIDGSEDNAGAVITPDTAER ARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVNDFRAVLVR
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=390, Percent_Identity=35.3846153846154, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI193205461, Length=351, Percent_Identity=30.4843304843305, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI19920578, Length=376, Percent_Identity=31.1170212765957, Blast_Score=135, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 37627; Mature: 37495
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGA CCCCCCHHCCCCCCCEEEEECCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCC DDLVLCLISGGGSALLARPAEGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRL CCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE AALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEARAVLARYGIAPPPAIAARLN EEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC DPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI CCHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDT HHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECC DGIDGSEDNAGAVITPDTAERARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVND CCCCCCCCCCCEEECCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCH FRAVLVR HEEEECC >Mature Secondary Structure ARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGA CCCCCHHCCCCCCCEEEEECCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCC DDLVLCLISGGGSALLARPAEGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRL CCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE AALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEARAVLARYGIAPPPAIAARLN EEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC DPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI CCHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDT HHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECC DGIDGSEDNAGAVITPDTAERARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVND CCCCCCCCCCCEEECCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCH FRAVLVR HEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]