| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is pheC [H]
Identifier: 83311389
GI number: 83311389
Start: 2491916
End: 2492755
Strand: Reverse
Name: pheC [H]
Synonym: amb2290
Alternate gene names: 83311389
Gene position: 2492755-2491916 (Counterclockwise)
Preceding gene: 83311391
Following gene: 83311387
Centisome position: 50.18
GC content: 61.55
Gene sequence:
>840_bases ATGTGGAATAGCATAATACATCCGTATCGGAGGACAAAAATGTACAGATTCGCCAGCCTGATTGCCGCCTTTTCGCTCCT GGTCCTGGGAGCGCAGCCCCTGGCCGCCGCGCCCGGCGGAAAGCTGGCAAAAATTCGTCAGGCCGGCGAGCTCAGGGTTT GTATTTGGCCCGACTACTACTCCATCTCCTACCGCAATACCCGGACGGGAAATCTGGAAGGGATCGACATCGACATGGCC CAGGAATTGGGCAAGGACCTGGGAGTACAGGTACGCTTTGTCGATTCCTCATTCAAGACCATGATTGACGATCTGCTTTC GGACAAGTGTGACATATCCATGCACGCCGTCGCGATTACGCCGGCGAGACAGGAAAAGCTCGCCTTCACTCGTCCGCACC TGCGCAGCGGCATCTTCGCCATTACCAGCAAGACCAATCCGGTGGTCAAGGAATGGTCGGACATCGACCGTGACGGCGTG GTGGTTGCCGCCGCCTCCGGGACGTTCATGGTGGGCGTGATGAAGGAAGAGCTGAAGAAAGCTCGGCTGCTGGAGGTGGC CACCCCCGAGGCGCGCGAGCAGGAAGTGATGAGCGGTCGCGCCGACCTGTTCGTCACCGACTACCCCTTCAGCCGCAAGA TGCTGGCCCGGCACGACTGGGCGAAGTTGTTGACTCCGCCCACGCCGCTGGCCCCCAGCCCCTACGCCTACGCCATGGCG CCGGGTGACGGCGAGTGGCTGGACGCGGTCGATTCCTTCGTCGCGCGCGCCAAGACCGACGGCCGCCTGCTGGCCGCCGC CAAGGCCAATGGCCTCGAGGCTATCGTCGATCTCAAATAG
Upstream 100 bases:
>100_bases CTGGAAAATACCGGGTTGACCGGCACACTGCCAAGATCCACCGAAGCATTTGCCGGTCGGGATTCCTCGGGTGTTATGGG GTTAGCGGCTTGCATGACTT
Downstream 100 bases:
>100_bases CGATCCCGGCCTTGGCCAGCCGGTCCACCAACTCGATCTCGGCATCGGGCGGCAGAGCCATCAGCGGCGGCCGCACCCGG CGCCAGCCGTAATCGCCGGT
Product: amino acid ABC transporter periplasmic protein
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MWNSIIHPYRRTKMYRFASLIAAFSLLVLGAQPLAAAPGGKLAKIRQAGELRVCIWPDYYSISYRNTRTGNLEGIDIDMA QELGKDLGVQVRFVDSSFKTMIDDLLSDKCDISMHAVAITPARQEKLAFTRPHLRSGIFAITSKTNPVVKEWSDIDRDGV VVAAASGTFMVGVMKEELKKARLLEVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTPPTPLAPSPYAYAMA PGDGEWLDAVDSFVARAKTDGRLLAAAKANGLEAIVDLK
Sequences:
>Translated_279_residues MWNSIIHPYRRTKMYRFASLIAAFSLLVLGAQPLAAAPGGKLAKIRQAGELRVCIWPDYYSISYRNTRTGNLEGIDIDMA QELGKDLGVQVRFVDSSFKTMIDDLLSDKCDISMHAVAITPARQEKLAFTRPHLRSGIFAITSKTNPVVKEWSDIDRDGV VVAAASGTFMVGVMKEELKKARLLEVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTPPTPLAPSPYAYAMA PGDGEWLDAVDSFVARAKTDGRLLAAAKANGLEAIVDLK >Mature_279_residues MWNSIIHPYRRTKMYRFASLIAAFSLLVLGAQPLAAAPGGKLAKIRQAGELRVCIWPDYYSISYRNTRTGNLEGIDIDMA QELGKDLGVQVRFVDSSFKTMIDDLLSDKCDISMHAVAITPARQEKLAFTRPHLRSGIFAITSKTNPVVKEWSDIDRDGV VVAAASGTFMVGVMKEELKKARLLEVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTPPTPLAPSPYAYAMA PGDGEWLDAVDSFVARAKTDGRLLAAAKANGLEAIVDLK
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=239, Percent_Identity=25.1046025104602, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 30777; Mature: 30777
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS01039 SBP_BACTERIAL_3 ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNSIIHPYRRTKMYRFASLIAAFSLLVLGAQPLAAAPGGKLAKIRQAGELRVCIWPDYY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCE SISYRNTRTGNLEGIDIDMAQELGKDLGVQVRFVDSSFKTMIDDLLSDKCDISMHAVAIT EEEECCCCCCCCCCCEEHHHHHCCHHHCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEC PARQEKLAFTRPHLRSGIFAITSKTNPVVKEWSDIDRDGVVVAAASGTFMVGVMKEELKK CCCHHHHCCCCCHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHH ARLLEVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTPPTPLAPSPYAYAMA HHHHHCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEC PGDGEWLDAVDSFVARAKTDGRLLAAAKANGLEAIVDLK CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECC >Mature Secondary Structure MWNSIIHPYRRTKMYRFASLIAAFSLLVLGAQPLAAAPGGKLAKIRQAGELRVCIWPDYY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCE SISYRNTRTGNLEGIDIDMAQELGKDLGVQVRFVDSSFKTMIDDLLSDKCDISMHAVAIT EEEECCCCCCCCCCCEEHHHHHCCHHHCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEC PARQEKLAFTRPHLRSGIFAITSKTNPVVKEWSDIDRDGVVVAAASGTFMVGVMKEELKK CCCHHHHCCCCCHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHH ARLLEVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTPPTPLAPSPYAYAMA HHHHHCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEC PGDGEWLDAVDSFVARAKTDGRLLAAAKANGLEAIVDLK CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]