| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is tsr [C]
Identifier: 83311340
GI number: 83311340
Start: 2444163
End: 2444459
Strand: Reverse
Name: tsr [C]
Synonym: amb2241
Alternate gene names: 83311340
Gene position: 2444459-2444163 (Counterclockwise)
Preceding gene: 83311342
Following gene: 83311339
Centisome position: 49.21
GC content: 65.66
Gene sequence:
>297_bases ATGTCCGATCAGGAACGTATTATCGAATTGACCGCCACCCTCGCCGACGTAGTGTCCCGCAAGGTCGAGGAAATCAAGAA GGTTACCGGCACCACCCGCATCCTGGCGCTGAACGCGCTGATCGAAGCCGCCCGCGCCGGCGAGGCCGGCAAGGGCTTCG CCGTGGTGGCCGGCGAGGTGAAGAACGTGTCCGAAAGCATCGACGGCATCACCCAGTCGCTGGAAGCCGAGATGGGCGCC GCCGTGGAGGAACTGGGCAAGCTGGCCGGGCGCCTGCGAGCCGACGCCGCCGAATAA
Upstream 100 bases:
>100_bases GCCAGACCCAAACCTTATGGACGATTTATACAAGCAGGCGATTGCCCGCCGCCCGGTCCCCCCTTACACTGGGGTTATCA CTCTTGCGGGAAGCCACACC
Downstream 100 bases:
>100_bases TCCCATGACCCAGCGCCCCCGGATGGCCCGACCGCTCGCCCCGTTCGCCCTCGCCGCCTTTCTGGCCCTGGGGGCGGTCC CGGCCCTGGCCGGCTATGAC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Sensory Transducer; Chemotaxis Sensory Transducer
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSDQERIIELTATLADVVSRKVEEIKKVTGTTRILALNALIEAARAGEAGKGFAVVAGEVKNVSESIDGITQSLEAEMGA AVEELGKLAGRLRADAAE
Sequences:
>Translated_98_residues MSDQERIIELTATLADVVSRKVEEIKKVTGTTRILALNALIEAARAGEAGKGFAVVAGEVKNVSESIDGITQSLEAEMGA AVEELGKLAGRLRADAAE >Mature_97_residues SDQERIIELTATLADVVSRKVEEIKKVTGTTRILALNALIEAARAGEAGKGFAVVAGEVKNVSESIDGITQSLEAEMGAA VEELGKLAGRLRADAAE
Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10224; Mature: 10093
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQERIIELTATLADVVSRKVEEIKKVTGTTRILALNALIEAARAGEAGKGFAVVAGEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH KNVSESIDGITQSLEAEMGAAVEELGKLAGRLRADAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDQERIIELTATLADVVSRKVEEIKKVTGTTRILALNALIEAARAGEAGKGFAVVAGEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH KNVSESIDGITQSLEAEMGAAVEELGKLAGRLRADAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA