| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311342
Identifier: 83311342
GI number: 83311342
Start: 2445389
End: 2446312
Strand: Reverse
Name: 83311342
Synonym: amb2243
Alternate gene names: NA
Gene position: 2446312-2445389 (Counterclockwise)
Preceding gene: 83311348
Following gene: 83311340
Centisome position: 49.25
GC content: 66.34
Gene sequence:
>924_bases ATGACACGCGCGGACAGCAGGGTTCTCAGCGTCCTGGCCCCCCGCCAGTTGTACGACTTCATCATGGAGACGGGTTTTAT CCGCGACGTGCTGCTGGCCCGGGTCGACAGGCCGGTCCGGATCGTGCTGGGCGAGCAGGGCCAGCAATTGCAGGCCATGG ACGACGTCCTGATCATCGATTTCGAGAATCGGCTGTCTCCGGTGGTGAATTCCTTCGCCAATGCGCCGTTCCGCAATGTG GGCGTCCTGCATATGGCCGACGAGACGCTGTCGGCCGATTGCTCCTATTACCCCAGGGTGGATTACGTCCTGCGCAATTA CTGGCGCCCCGACGTCCTGGAGATTCCGGCGGGAAGCCGCTGCCAGGGCGTCCTCTGGGTACCCAACGGCTATCGCACCG GGGTGGGGCCGTGCCCTCCCGAGACGCTGCTGCCCTTCGCGTTGCGCACCCACCAGATGAGCTTCGTCGGGCGCACGCCG CCCGAACTGGCCGACCGCCACCGGATGATGGAGGTGATCGGCGCCCATGGCCTTCCGGCCAGGCTTGAGACCTCACTCAA ATTCGGCGGCGAGTTCAGCCCGCACAGCTATCGCGCCCTGATGGAGAATACCCGCTTCGCCCTGGTGCCCACCGGCAATT CGGTGGAGACCATCCGCCTCTACGACGCCCTGGAAACCGGAGCCATCCCGGTCTGCCTGGACGCGCCGTTCCTGCATGAC GAGCGCACTGCCGGCGGCATCCCGGCGGTGATCCTGAAGTCTTGGGAGGAGCTTCCCCAATGGTGGAGCACGGCGGAGGC AGAGCCCGGGCGCTATGCCGCCCTGCAGGCCCAGGTGATCGCCTGGTGGAGCGCCTTCAAGGACCGCCAGGCCGATCGGG TGGCAAGCCTGATCAACGGCGCCTTCGCCCGCAGCGCGGCTTGA
Upstream 100 bases:
>100_bases GGTTTCCGGCCTCTTTCCTTTTCGGCCCGACCTTCCTGCCGGCCTCGGTTTCGGCTATCTTGGCGCGGCCCAACCGCAAC AGAGCCGGAGCTCCTTTTCC
Downstream 100 bases:
>100_bases TCACTCCCCGGTGAAGTTGGGCTGGCGCTTCTCCTTGAAGGCCCGCACACCCTCCTGATAGTCCTGGCTGTCGTAGACCT TGCGACGCAGGCCCTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTRADSRVLSVLAPRQLYDFIMETGFIRDVLLARVDRPVRIVLGEQGQQLQAMDDVLIIDFENRLSPVVNSFANAPFRNV GVLHMADETLSADCSYYPRVDYVLRNYWRPDVLEIPAGSRCQGVLWVPNGYRTGVGPCPPETLLPFALRTHQMSFVGRTP PELADRHRMMEVIGAHGLPARLETSLKFGGEFSPHSYRALMENTRFALVPTGNSVETIRLYDALETGAIPVCLDAPFLHD ERTAGGIPAVILKSWEELPQWWSTAEAEPGRYAALQAQVIAWWSAFKDRQADRVASLINGAFARSAA
Sequences:
>Translated_307_residues MTRADSRVLSVLAPRQLYDFIMETGFIRDVLLARVDRPVRIVLGEQGQQLQAMDDVLIIDFENRLSPVVNSFANAPFRNV GVLHMADETLSADCSYYPRVDYVLRNYWRPDVLEIPAGSRCQGVLWVPNGYRTGVGPCPPETLLPFALRTHQMSFVGRTP PELADRHRMMEVIGAHGLPARLETSLKFGGEFSPHSYRALMENTRFALVPTGNSVETIRLYDALETGAIPVCLDAPFLHD ERTAGGIPAVILKSWEELPQWWSTAEAEPGRYAALQAQVIAWWSAFKDRQADRVASLINGAFARSAA >Mature_306_residues TRADSRVLSVLAPRQLYDFIMETGFIRDVLLARVDRPVRIVLGEQGQQLQAMDDVLIIDFENRLSPVVNSFANAPFRNVG VLHMADETLSADCSYYPRVDYVLRNYWRPDVLEIPAGSRCQGVLWVPNGYRTGVGPCPPETLLPFALRTHQMSFVGRTPP ELADRHRMMEVIGAHGLPARLETSLKFGGEFSPHSYRALMENTRFALVPTGNSVETIRLYDALETGAIPVCLDAPFLHDE RTAGGIPAVILKSWEELPQWWSTAEAEPGRYAALQAQVIAWWSAFKDRQADRVASLINGAFARSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34284; Mature: 34152
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRADSRVLSVLAPRQLYDFIMETGFIRDVLLARVDRPVRIVLGEQGQQLQAMDDVLIID CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCEEEEE FENRLSPVVNSFANAPFRNVGVLHMADETLSADCSYYPRVDYVLRNYWRPDVLEIPAGSR CHHHHHHHHHHHHCCCCCCCCEEEECCCHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCC CQGVLWVPNGYRTGVGPCPPETLLPFALRTHQMSFVGRTPPELADRHRMMEVIGAHGLPA CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCH RLETSLKFGGEFSPHSYRALMENTRFALVPTGNSVETIRLYDALETGAIPVCLDAPFLHD HHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEEEHHHCCCEEEEECCCCCCC ERTAGGIPAVILKSWEELPQWWSTAEAEPGRYAALQAQVIAWWSAFKDRQADRVASLING CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFARSAA HHHHCCC >Mature Secondary Structure TRADSRVLSVLAPRQLYDFIMETGFIRDVLLARVDRPVRIVLGEQGQQLQAMDDVLIID CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCEEEEE FENRLSPVVNSFANAPFRNVGVLHMADETLSADCSYYPRVDYVLRNYWRPDVLEIPAGSR CHHHHHHHHHHHHCCCCCCCCEEEECCCHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCC CQGVLWVPNGYRTGVGPCPPETLLPFALRTHQMSFVGRTPPELADRHRMMEVIGAHGLPA CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCH RLETSLKFGGEFSPHSYRALMENTRFALVPTGNSVETIRLYDALETGAIPVCLDAPFLHD HHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEEEHHHCCCEEEEECCCCCCC ERTAGGIPAVILKSWEELPQWWSTAEAEPGRYAALQAQVIAWWSAFKDRQADRVASLING CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFARSAA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA