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The map label for this gene is ycbK [H]

Identifier: 83311305

GI number: 83311305

Start: 2403583

End: 2404038

Strand: Reverse

Name: ycbK [H]

Synonym: amb2206

Alternate gene names: 83311305

Gene position: 2404038-2403583 (Counterclockwise)

Preceding gene: 83311306

Following gene: 83311304

Centisome position: 48.4

GC content: 65.57

Gene sequence:

>456_bases
GTGCGGCGCCTGCCCGAGCGCCAGATCCACCTCTACAACACCCATACGGGCGAGACCCTGAAGTCGGTCTACTGGGCCGA
GGGGCACTACCAGACCAAGTCCATCGCCCAGATCAGCCGCTTCCTGCGCGATCATCGCAACGGTCAGGTCCATCCCATCG
ACCCCAAGCTGTTCGACCTGATGAATTCGGTCCAGCGCAAGGTGGGCGGCAAGGGTCCCATCCACATCATTTGCGGCTAC
CGCTCGCCGTCGACCAACGCCATCATGGCCTCGCTCAGCGACGGCGTCGCCACCCAGTCCCTGCACACCCAGGGCAAGGC
CGTGGATATCCGGCTGCCCGGCCACGCCACCCGCCATGTAGGCCGTGCCGCCCTCTCCCTGAAGGCCGGCGGCGTCGGCA
TGTATCCCGAATCCGATTTCGTCCACATCGACACCGGACGCGTGCGGACCTGGTAA

Upstream 100 bases:

>100_bases
AGGGGGAATGTTCGATAAGGCGAAGAGCCGGCGTGGCTTCCTCGGACTCGGTCTGAGCGCGGCAGCCACCCTTGTGATCA
GCAATCCGGTCGAGGCCGCC

Downstream 100 bases:

>100_bases
AGGGGTAACGGGGCGGCTCCCCTATTTTCCCTTGCGGCCCTCGAGCATCGGCTTGAGGGCTTCCACCGCCTGGACCACCT
TGTCCGGCGGCACCTGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRRLPERQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDLMNSVQRKVGGKGPIHIICGY
RSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHVGRAALSLKAGGVGMYPESDFVHIDTGRVRTW

Sequences:

>Translated_151_residues
MRRLPERQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDLMNSVQRKVGGKGPIHIICGY
RSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHVGRAALSLKAGGVGMYPESDFVHIDTGRVRTW
>Mature_151_residues
MRRLPERQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDLMNSVQRKVGGKGPIHIICGY
RSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHVGRAALSLKAGGVGMYPESDFVHIDTGRVRTW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=145, Percent_Identity=43.448275862069, Blast_Score=131, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 16833; Mature: 16833

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPERQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDL
CCCCCCCEEEEEECCCCHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
MNSVQRKVGGKGPIHIICGYRSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHV
HHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCHHHHH
GRAALSLKAGGVGMYPESDFVHIDTGRVRTW
HHHHEEEECCCCCCCCCCCEEEECCCCEECC
>Mature Secondary Structure
MRRLPERQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDL
CCCCCCCEEEEEECCCCHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
MNSVQRKVGGKGPIHIICGYRSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHV
HHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCHHHHH
GRAALSLKAGGVGMYPESDFVHIDTGRVRTW
HHHHEEEECCCCCCCCCCCEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]