Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is bcrD [H]

Identifier: 83311237

GI number: 83311237

Start: 2313908

End: 2314747

Strand: Reverse

Name: bcrD [H]

Synonym: amb2138

Alternate gene names: 83311237

Gene position: 2314747-2313908 (Counterclockwise)

Preceding gene: 83311238

Following gene: 83311236

Centisome position: 46.6

GC content: 64.64

Gene sequence:

>840_bases
ATGTCTGAACTTATCACTACCGGTGTTGACATCGGATCGGGCTGCATCAAGACCGTGGTCTTCAAGGTCAATGGCGACAA
GGTCGAGTGGCTGGGCAAGGAAACGGCGCGTATCCGTAACCGCGACCCCTTCCAGCTGACCAACGAAGCCTATGACCACA
TGCTGAAGACCGCCGGCGTGGACCGCAAGGACGTCGCCTATGTGGCTTCCACCGGCGACGCCGAGAATCTCAGCTTCGCC
ACCGGCCACTTCTACTCCATGACCACCCATGGTCGCGGCGGCCTGTACCTCAACCCGGAAGCCCGCGCCGTGCTCGACAT
CGGCGCCCTGAACGGCCGCGCCATCCGCATGGACGGCGTGGGCAAGGTGCTGTCCTACAAGATGACCAGCCAGTGCGCCT
CGGGCTCGGGCCAGTTCCTCGAGAACATCGCCCGCTACCTGGGCATCGCCCAGGACGAAATCGGCTCGCTGTCCATGAAG
GCCGATGACCCCGAGAAGGTGTCGTCCATCTGCGCCGTGCTGGCGGAGACCGACGTCATCAACATGGTGTCGCGCGGCAT
CTCGGCTTCGAACATCCTCAAGGGCATTCACGTGTCCATGGCGGTGCGCCTGGCCAAGCTGCTGAAGTCCATCGGCGCCG
TGGACGGCATCGTCCAGGTCACCGGCGGCCTGGCTCTCGACACCGGCCTGGTGGCGGCTCTGAACGAGGCGGCCGAGCAG
GAGAAGGTCAACCTGAAGGCCGTCTCCCACCCGGACTCCATCTATGCCGGCGCCATCGGTGCCGCGCTGTGGGGCGCCTT
CCGTCACGAAAAGCTGGCCCGCCTGGGTCAAGCGGCGTAA

Upstream 100 bases:

>100_bases
CATCAACATCGACCCGGACTCGATCTACACCGGCGCTCTCGGCGGGGCCACCTTCGCCGTCCGCGCGGTCGTCAACTAAT
CGGGAAGGGAGGAGACATCA

Downstream 100 bases:

>100_bases
TATCCGCCCGGCGGTCCCCTCCTGACGCTTGGAGCCCAAGCGTCAGGAGGAAGGACCGCCGACTTTTCGAATGATCCGGC
CCCGGTCACCCGCGATCAAC

Product: D-subunit of benzoyl-CoA reductase

Products: NA

Alternate protein names: 3-hydroxybenzoyl-CoA reductase subunit delta [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGVDRKDVAYVASTGDAENLSFA
TGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGVGKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMK
ADDPEKVSSICAVLAETDVINMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ
EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA

Sequences:

>Translated_279_residues
MSELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGVDRKDVAYVASTGDAENLSFA
TGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGVGKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMK
ADDPEKVSSICAVLAETDVINMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ
EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA
>Mature_278_residues
SELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGVDRKDVAYVASTGDAENLSFAT
GHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGVGKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMKA
DDPEKVSSICAVLAETDVINMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQE
KVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA

Specific function: Catalyzes the anaerobic reduction of benzoyl-CoA and 3- hydroxybenzoyl-CoA to form cyclohexa-1,5-diene-1-carbonyl-CoA and 3-hydroxycyclohexa-1,5-diene-1-carbonyl-CoA, respectively. The enzyme also reduces other benzoyl-CoA analogs with small substituents

COG id: COG1924

COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082426, Length=200, Percent_Identity=33, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002731
- InterPro:   IPR011956
- InterPro:   IPR008275 [H]

Pfam domain/function: PF01869 BcrAD_BadFG [H]

EC number: =1.3.99.15 [H]

Molecular weight: Translated: 29484; Mature: 29353

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGV
CCCHHHCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHCCCCCCEEHHHHHHHHHHHCCC
DRKDVAYVASTGDAENLSFATGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGV
CHHHEEEEECCCCCCCCEEECCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEECCC
GKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMKADDPEKVSSICAVLAETDVI
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHH
NMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA
HHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGV
CCHHHCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHCCCCCCEEHHHHHHHHHHHCCC
DRKDVAYVASTGDAENLSFATGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGV
CHHHEEEEECCCCCCCCEEECCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEECCC
GKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMKADDPEKVSSICAVLAETDVI
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHH
NMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA
HHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746358; 11208796 [H]