| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is bcrD [H]
Identifier: 83311237
GI number: 83311237
Start: 2313908
End: 2314747
Strand: Reverse
Name: bcrD [H]
Synonym: amb2138
Alternate gene names: 83311237
Gene position: 2314747-2313908 (Counterclockwise)
Preceding gene: 83311238
Following gene: 83311236
Centisome position: 46.6
GC content: 64.64
Gene sequence:
>840_bases ATGTCTGAACTTATCACTACCGGTGTTGACATCGGATCGGGCTGCATCAAGACCGTGGTCTTCAAGGTCAATGGCGACAA GGTCGAGTGGCTGGGCAAGGAAACGGCGCGTATCCGTAACCGCGACCCCTTCCAGCTGACCAACGAAGCCTATGACCACA TGCTGAAGACCGCCGGCGTGGACCGCAAGGACGTCGCCTATGTGGCTTCCACCGGCGACGCCGAGAATCTCAGCTTCGCC ACCGGCCACTTCTACTCCATGACCACCCATGGTCGCGGCGGCCTGTACCTCAACCCGGAAGCCCGCGCCGTGCTCGACAT CGGCGCCCTGAACGGCCGCGCCATCCGCATGGACGGCGTGGGCAAGGTGCTGTCCTACAAGATGACCAGCCAGTGCGCCT CGGGCTCGGGCCAGTTCCTCGAGAACATCGCCCGCTACCTGGGCATCGCCCAGGACGAAATCGGCTCGCTGTCCATGAAG GCCGATGACCCCGAGAAGGTGTCGTCCATCTGCGCCGTGCTGGCGGAGACCGACGTCATCAACATGGTGTCGCGCGGCAT CTCGGCTTCGAACATCCTCAAGGGCATTCACGTGTCCATGGCGGTGCGCCTGGCCAAGCTGCTGAAGTCCATCGGCGCCG TGGACGGCATCGTCCAGGTCACCGGCGGCCTGGCTCTCGACACCGGCCTGGTGGCGGCTCTGAACGAGGCGGCCGAGCAG GAGAAGGTCAACCTGAAGGCCGTCTCCCACCCGGACTCCATCTATGCCGGCGCCATCGGTGCCGCGCTGTGGGGCGCCTT CCGTCACGAAAAGCTGGCCCGCCTGGGTCAAGCGGCGTAA
Upstream 100 bases:
>100_bases CATCAACATCGACCCGGACTCGATCTACACCGGCGCTCTCGGCGGGGCCACCTTCGCCGTCCGCGCGGTCGTCAACTAAT CGGGAAGGGAGGAGACATCA
Downstream 100 bases:
>100_bases TATCCGCCCGGCGGTCCCCTCCTGACGCTTGGAGCCCAAGCGTCAGGAGGAAGGACCGCCGACTTTTCGAATGATCCGGC CCCGGTCACCCGCGATCAAC
Product: D-subunit of benzoyl-CoA reductase
Products: NA
Alternate protein names: 3-hydroxybenzoyl-CoA reductase subunit delta [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGVDRKDVAYVASTGDAENLSFA TGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGVGKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMK ADDPEKVSSICAVLAETDVINMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA
Sequences:
>Translated_279_residues MSELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGVDRKDVAYVASTGDAENLSFA TGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGVGKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMK ADDPEKVSSICAVLAETDVINMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA >Mature_278_residues SELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGVDRKDVAYVASTGDAENLSFAT GHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGVGKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMKA DDPEKVSSICAVLAETDVINMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQE KVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA
Specific function: Catalyzes the anaerobic reduction of benzoyl-CoA and 3- hydroxybenzoyl-CoA to form cyclohexa-1,5-diene-1-carbonyl-CoA and 3-hydroxycyclohexa-1,5-diene-1-carbonyl-CoA, respectively. The enzyme also reduces other benzoyl-CoA analogs with small substituents
COG id: COG1924
COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082426, Length=200, Percent_Identity=33, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002731 - InterPro: IPR011956 - InterPro: IPR008275 [H]
Pfam domain/function: PF01869 BcrAD_BadFG [H]
EC number: =1.3.99.15 [H]
Molecular weight: Translated: 29484; Mature: 29353
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGV CCCHHHCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHCCCCCCEEHHHHHHHHHHHCCC DRKDVAYVASTGDAENLSFATGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGV CHHHEEEEECCCCCCCCEEECCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEECCC GKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMKADDPEKVSSICAVLAETDVI CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHH NMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA HHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SELITTGVDIGSGCIKTVVFKVNGDKVEWLGKETARIRNRDPFQLTNEAYDHMLKTAGV CCHHHCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHCCCCCCEEHHHHHHHHHHHCCC DRKDVAYVASTGDAENLSFATGHFYSMTTHGRGGLYLNPEARAVLDIGALNGRAIRMDGV CHHHEEEEECCCCCCCCEEECCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEECCC GKVLSYKMTSQCASGSGQFLENIARYLGIAQDEIGSLSMKADDPEKVSSICAVLAETDVI CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHH NMVSRGISASNILKGIHVSMAVRLAKLLKSIGAVDGIVQVTGGLALDTGLVAALNEAAEQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EKVNLKAVSHPDSIYAGAIGAALWGAFRHEKLARLGQAA HHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9746358; 11208796 [H]