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The map label for this gene is yrbE [C]

Identifier: 83311193

GI number: 83311193

Start: 2270191

End: 2270967

Strand: Reverse

Name: yrbE [C]

Synonym: amb2094

Alternate gene names: 83311193

Gene position: 2270967-2270191 (Counterclockwise)

Preceding gene: 83311194

Following gene: 83311192

Centisome position: 45.72

GC content: 65.12

Gene sequence:

>777_bases
ATGAGCAATGTTCTCGCTCCCGTCGGCCGGGTCTTTCTGGCGTTTCTCGCCCATGTGGGCCGGCTGTCGGCCTTTACCGC
CATGGCGGTGTCGCACACCGTCCGCCCGCCCTTCTATCCCCGGCTGATCCTGCGCGAGTTCATCGAGATCGGGTATTTCT
CGCTGCCCGTGGTCGGCCTGACCGCCGTATTCACCGGCATGGTGCTGGCGCTGCAATCCTATTCCGGCTTCTCGCGCTTT
GCCGCCGAGGGCGCCGTGGCCACGGTGGTGGTCCTCTCGGTGACCCGCGAACTGGCCCCGGTGCTGGCCGGGCTGATGGT
GGCGGGGCGCATCGGCGCCTCCATGGCCGCCGAGATCGGCACCATGCGCGTCACCGAGCAGATCGATGCCCTGACCACGC
TGTCGACCAATCCCTTCAAGTATCTGGTGGCGCCGCGCATCCTGGCCGGCACCCTGATGCTGCCCTTCCTGGTGCTGATC
GCCGACATCATCGGCGTGTTCGGCGGCTATATCGTCGGCGTCTACAAGCTGGGCTTCAACTCGGCCACCTATATCGCCCG
CACCTGGGAATTCCTCGAGCCGCTGGATGTGATCTCGGGCCTGACCAAGGCCGCCGTGTTCGGCTTCCTGATCACGCTCA
TGGGCTGCTACAACGGCTATTACTCCAAGGGCGGCGCCCAGGGCGTCGGCGCGGCCACCACCAACGCGGTGGTGTCGGCG
GCCATCATGATCCTGGTGTTCAACTACGTCATCACCGCCATGTTCTTCGGGAAATGA

Upstream 100 bases:

>100_bases
ACCATTTGGCCGCCGAGGCCGACACCATCGGCTACGAGGTTCTGACCGCCCTGGGACGCCGCCATCTCCGTCGCTGGATC
GGCACCGAGGGCGCCGCCTC

Downstream 100 bases:

>100_bases
CCATGACCAGCGTGCCGAAGATCGAACTGACGGGCGTGCACAAGGCCTTCGGCCCCAAGGTGGTGCTGGACGGCATCGAC
CTCAGCGTCGCCAGGGGTGA

Product: ABC-type transport system involved in resistance to organic solvents

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRF
AAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLI
ADIIGVFGGYIVGVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSA
AIMILVFNYVITAMFFGK

Sequences:

>Translated_258_residues
MSNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRF
AAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLI
ADIIGVFGGYIVGVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSA
AIMILVFNYVITAMFFGK
>Mature_257_residues
SNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRFA
AEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIA
DIIGVFGGYIVGVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSAA
IMILVFNYVITAMFFGK

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=265, Percent_Identity=34.7169811320755, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27411; Mature: 27280

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH
TAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVGVYKLGFN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
AIMILVFNYVITAMFFGK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH
TAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVGVYKLGFN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
AIMILVFNYVITAMFFGK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA