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The map label for this gene is alr [H]

Identifier: 83311194

GI number: 83311194

Start: 2270964

End: 2272193

Strand: Reverse

Name: alr [H]

Synonym: amb2095

Alternate gene names: 83311194

Gene position: 2272193-2270964 (Counterclockwise)

Preceding gene: 83311195

Following gene: 83311193

Centisome position: 45.74

GC content: 67.64

Gene sequence:

>1230_bases
GTGCCGGGCTGGGCGTCTGGCAACTGCGCCGCTACTTGCGCCTTCGCTGAACAGGGACTTGTTTTCCCGAGCGAAGAGAG
GGATGGTGCGCTCTCCCCTTTGCCTGGACGGACCATGACCGATCTTGCCCGCGCCACCGCCCTGCTGACCATCGACGTGG
CGGCCATCGTCGCCAACTGGAAACGGCTGTCCGCCCTGGTGGCCCCTGCCGAGGCCTCCGCCGTGGTCAAGGCCGACTGC
TACGGCTTGGGGATGGACCGCATCGCCCCCGCCCTGTTCGCCGCCGGCTGCCGTTCGTTCTTCGTCGCCTGCGTCAATGA
AGGCATCGCGTTGCGCCGCCTGCTGCCGGGGGCCATGATTCACGTGCTCAGCGGGCCTATGGGCGGTGACGAGGCCGAGT
TCGCCGCCCACGGACTGATCCCCGTCCTGAACTCCCTGTCCCAGATGACCGGCTGGGCCAGCTTCGCCAAGAAGGGCAGC
GGCGCCCCCGCCGTGGCCATCCATATCGACACCGGCATGAGCCGCCTGGGCCTGTCCGAGCCGGAGTTGGAGCGTCTGGC
CGCCAAGCCGGAGATCCTGGCCGCCATGCGCCCCATTCTGGTGATGAGCCATCTGGCCTGCGCCGACGACAGCGATTCGC
CCATGAACGCCCGCCAGTTAACCACCCTGCGTCGGCTGGCCTCGCATCTGCCCGCCCTGCCCCAGTCCATCGCCGCGTCG
TCGGGCATTTTCCTGGGCCGGGGCTTTCATCTTGGAATGGTGCGGCCCGGCGCGGCCCTCTACGGGCTCAATCCCATGCC
GGGCCGCCCCAATCCCATGAGCCAAGTGATTAAACTGGAAGGAAAAATCGTCCAGGTCCGTGACGTTGACAGCCCCCAGA
CCGTTGGCTATGGTGCCACCCACCGCGTCGAGGGGAAGCGGCGGCTGGCCATCGTGGCCGTCGGCTATGCCGATGGCTGG
TTCCGGTCCCTCTCCAATCGCGGACATGGCATGATCGGGGGGGTGAAGGTGCCGGTGGTCGGACGGGTTTCCATGGATTT
GACCACCTTCGACGTCACCGACGTCCCGGTGGAGAGCGCCCATCCCGGCGGGTTGATCCAGTTGATCGGCCCCGGTTACG
GCCCCGACCATTTGGCCGCCGAGGCCGACACCATCGGCTACGAGGTTCTGACCGCCCTGGGACGCCGCCATCTCCGTCGC
TGGATCGGCACCGAGGGCGCCGCCTCATGA

Upstream 100 bases:

>100_bases
GCCATCGGATTGGACGCCACCGGCTCCCGGTCGGCGGATGTCAGCATCAGCCTGATCCTGGGCGCCGTCGCCGGTGTCAT
CGCCTTGGCCGGAGCGGCCT

Downstream 100 bases:

>100_bases
GCAATGTTCTCGCTCCCGTCGGCCGGGTCTTTCTGGCGTTTCTCGCCCATGTGGGCCGGCTGTCGGCCTTTACCGCCATG
GCGGTGTCGCACACCGTCCG

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPGWASGNCAATCAFAEQGLVFPSEERDGALSPLPGRTMTDLARATALLTIDVAAIVANWKRLSALVAPAEASAVVKADC
YGLGMDRIAPALFAAGCRSFFVACVNEGIALRRLLPGAMIHVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGS
GAPAVAIHIDTGMSRLGLSEPELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQLTTLRRLASHLPALPQSIAAS
SGIFLGRGFHLGMVRPGAALYGLNPMPGRPNPMSQVIKLEGKIVQVRDVDSPQTVGYGATHRVEGKRRLAIVAVGYADGW
FRSLSNRGHGMIGGVKVPVVGRVSMDLTTFDVTDVPVESAHPGGLIQLIGPGYGPDHLAAEADTIGYEVLTALGRRHLRR
WIGTEGAAS

Sequences:

>Translated_409_residues
MPGWASGNCAATCAFAEQGLVFPSEERDGALSPLPGRTMTDLARATALLTIDVAAIVANWKRLSALVAPAEASAVVKADC
YGLGMDRIAPALFAAGCRSFFVACVNEGIALRRLLPGAMIHVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGS
GAPAVAIHIDTGMSRLGLSEPELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQLTTLRRLASHLPALPQSIAAS
SGIFLGRGFHLGMVRPGAALYGLNPMPGRPNPMSQVIKLEGKIVQVRDVDSPQTVGYGATHRVEGKRRLAIVAVGYADGW
FRSLSNRGHGMIGGVKVPVVGRVSMDLTTFDVTDVPVESAHPGGLIQLIGPGYGPDHLAAEADTIGYEVLTALGRRHLRR
WIGTEGAAS
>Mature_408_residues
PGWASGNCAATCAFAEQGLVFPSEERDGALSPLPGRTMTDLARATALLTIDVAAIVANWKRLSALVAPAEASAVVKADCY
GLGMDRIAPALFAAGCRSFFVACVNEGIALRRLLPGAMIHVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGSG
APAVAIHIDTGMSRLGLSEPELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQLTTLRRLASHLPALPQSIAASS
GIFLGRGFHLGMVRPGAALYGLNPMPGRPNPMSQVIKLEGKIVQVRDVDSPQTVGYGATHRVEGKRRLAIVAVGYADGWF
RSLSNRGHGMIGGVKVPVVGRVSMDLTTFDVTDVPVESAHPGGLIQLIGPGYGPDHLAAEADTIGYEVLTALGRRHLRRW
IGTEGAAS

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=363, Percent_Identity=29.7520661157025, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787439, Length=354, Percent_Identity=28.8135593220339, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 42845; Mature: 42714

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGWASGNCAATCAFAEQGLVFPSEERDGALSPLPGRTMTDLARATALLTIDVAAIVANW
CCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KRLSALVAPAEASAVVKADCYGLGMDRIAPALFAAGCRSFFVACVNEGIALRRLLPGAMI
HHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGSGAPAVAIHIDTGMSRLGLSE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCC
PELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQLTTLRRLASHLPALPQSIAAS
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHC
SGIFLGRGFHLGMVRPGAALYGLNPMPGRPNPMSQVIKLEGKIVQVRDVDSPQTVGYGAT
CCEEEECCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCE
HRVEGKRRLAIVAVGYADGWFRSLSNRGHGMIGGVKVPVVGRVSMDLTTFDVTDVPVESA
EEECCCEEEEEEEEECCCHHHHHHCCCCCCEECCEEECEEEEEEEEEEEEECCCCCCCCC
HPGGLIQLIGPGYGPDHLAAEADTIGYEVLTALGRRHLRRWIGTEGAAS
CCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PGWASGNCAATCAFAEQGLVFPSEERDGALSPLPGRTMTDLARATALLTIDVAAIVANW
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KRLSALVAPAEASAVVKADCYGLGMDRIAPALFAAGCRSFFVACVNEGIALRRLLPGAMI
HHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGSGAPAVAIHIDTGMSRLGLSE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCC
PELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQLTTLRRLASHLPALPQSIAAS
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHC
SGIFLGRGFHLGMVRPGAALYGLNPMPGRPNPMSQVIKLEGKIVQVRDVDSPQTVGYGAT
CCEEEECCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCE
HRVEGKRRLAIVAVGYADGWFRSLSNRGHGMIGGVKVPVVGRVSMDLTTFDVTDVPVESA
EEECCCEEEEEEEEECCCHHHHHHCCCCCCEECCEEECEEEEEEEEEEEEECCCCCCCCC
HPGGLIQLIGPGYGPDHLAAEADTIGYEVLTALGRRHLRRWIGTEGAAS
CCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA