| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311086
Identifier: 83311086
GI number: 83311086
Start: 2146890
End: 2147339
Strand: Reverse
Name: 83311086
Synonym: amb1987
Alternate gene names: NA
Gene position: 2147339-2146890 (Counterclockwise)
Preceding gene: 83311087
Following gene: 83311085
Centisome position: 43.23
GC content: 58.67
Gene sequence:
>450_bases TTGGCCTTTATGGTTGCAGCGCGTTCGAGGCCAGTCTACGGGGTAACGAACATGGAATGGCATGAGATGATGAGCGTGGG CGTGGCCGAGTTCGACGAGGACCACAAGCGGGTGATCGTACTGCTCACGGAAATCCACGAGGCCCTCGATCTCAGACAGG TCGGACGGGCCTCGGAGCTGGCGGCGGAACTGCTGAAACTGGCCACGGCCCACACCGAACGGGAAGAGGTGTTTCTTCGC CGGATCGGCTTCCCCGACGTCGAGCTGGTGACCAATCCGCAGAAGGAAAGCCTGACCCGCATCACCGAGTTGGTCTGCCA GTTCGACCAGAATACCGTTGCGGCCGACGACGCCATCTTGGAAATGCGCCTTTCCTTCATCGACTACCTGCTCAGTGCCG ACATCAACTACAAGAGTTACGTGAAATCCAAAGGCTTGTCCGACTGCTAG
Upstream 100 bases:
>100_bases TCCTCGTTCGAGAGCGGCGATGCCTGCTTTTTTGTTGTATTAAGCACGACAACCAACTACTTTTAGAAGACAGATCATCC AATCTCCATCAGTGGGTCGC
Downstream 100 bases:
>100_bases ACCCTTGCTCCGCTTGGCGCGCTCGGCTAGCCTCGCCCCACTGGTCATACCGGAGGCGAGCGATGCGGGTCCTGGTTCTG GGTGCGGGAGCGACGGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAFMVAARSRPVYGVTNMEWHEMMSVGVAEFDEDHKRVIVLLTEIHEALDLRQVGRASELAAELLKLATAHTEREEVFLR RIGFPDVELVTNPQKESLTRITELVCQFDQNTVAADDAILEMRLSFIDYLLSADINYKSYVKSKGLSDC
Sequences:
>Translated_149_residues MAFMVAARSRPVYGVTNMEWHEMMSVGVAEFDEDHKRVIVLLTEIHEALDLRQVGRASELAAELLKLATAHTEREEVFLR RIGFPDVELVTNPQKESLTRITELVCQFDQNTVAADDAILEMRLSFIDYLLSADINYKSYVKSKGLSDC >Mature_148_residues AFMVAARSRPVYGVTNMEWHEMMSVGVAEFDEDHKRVIVLLTEIHEALDLRQVGRASELAAELLKLATAHTEREEVFLRR IGFPDVELVTNPQKESLTRITELVCQFDQNTVAADDAILEMRLSFIDYLLSADINYKSYVKSKGLSDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16938; Mature: 16806
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFMVAARSRPVYGVTNMEWHEMMSVGVAEFDEDHKRVIVLLTEIHEALDLRQVGRASEL CCEEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH AAELLKLATAHTEREEVFLRRIGFPDVELVTNPQKESLTRITELVCQFDQNTVAADDAIL HHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHH EMRLSFIDYLLSADINYKSYVKSKGLSDC HHHHHHHHHHHHCCCCHHHHHHCCCCCCC >Mature Secondary Structure AFMVAARSRPVYGVTNMEWHEMMSVGVAEFDEDHKRVIVLLTEIHEALDLRQVGRASEL CEEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH AAELLKLATAHTEREEVFLRRIGFPDVELVTNPQKESLTRITELVCQFDQNTVAADDAIL HHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHH EMRLSFIDYLLSADINYKSYVKSKGLSDC HHHHHHHHHHHHCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA