| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is nrtB [H]
Identifier: 83310958
GI number: 83310958
Start: 2000118
End: 2001002
Strand: Reverse
Name: nrtB [H]
Synonym: amb1859
Alternate gene names: 83310958
Gene position: 2001002-2000118 (Counterclockwise)
Preceding gene: 83310959
Following gene: 83310957
Centisome position: 40.28
GC content: 69.49
Gene sequence:
>885_bases ATGGGGATGACGAAGAATTTCGCCCCCTCCCTCCCGCTTAGCGGGTCCCTCCCTCCCCCGGCCAGGCCGGGGGAGGGTTG GGGTGGGGGCCGTCTCCAGCTCCGCTCCTGGGCCCTGGGCATCACCTCCCTGGGGCTGTTCCTGGCAGCCTGGCATCTGG CCACCCTTTACCGGCTGGACCTGCATGTGCGCTTCGGCAACGTTCCTTCGCCCGAGGCGGTGCTGCGCCGGGCCCTGGTG GCCTTCGCCGATCCCCGCTTCCTCGAACACATCGCCATGAGCGTCCAGCGCATCGGTGCCGGCTTCGCCCTGGCGGCCAT CGTCGCCGTGCCGCTGGGCATCGCCATGGGCCGCTTCGCTCCGCTGCGTTCGGCGGTCTATCCGGTGGTCGAGGTGCTGC GCCCCATCCCGGCCATCGCCTGGGTGCCCATGTCCATCATGCTGTGGCCCAGCAACGAGGAAAGTATCGTCTTCATCACC TTCCTGGGCTCGTTCTTTCCCATCCTGATCAACACCCTGCACGGGGTGGCGGCCATCGACCCCGCCCTGGTCCGGGCATC GCGCTCGCTGGGCGCGGGCGAGGCCGCCCTGTTCCGCCATGTCTTCCTGCCCGGGGCGCTGCCGCACATCTTCACCGGCC TGACGGTGGGCATGGGGGTGGCCTGGGTGTCGCTGATCGCCGCCGAGATGATCTCGGGGCAATTCGGCATCGGCTATTTC ACCTGGGAAGCCTATGCCCTGGTGCAATACGCCGACATCGTGCTGGGCATGCTGCTGATCGGGGTGCTGGGGCTGGCCTC CAGCGGCCTGATCCGCCTGCTGGGCCGCGCCGTCATGCCGTGGAGCACCGCCTCCGCCCCCCTTCGCCGCGAGGCCCGCC CATGA
Upstream 100 bases:
>100_bases CCTTCCTGGTGAAGAAGGACGCCGAGGCCCACGCCGCCCGGATCGGCGGCAAGGTGGCGGGCTTCGACGAAGCCCTGGTG GCGGTGGGCGCCGGGAGCTG
Downstream 100 bases:
>100_bases ACGCCCTTCCCAACCGCCGCAGCCTGACCGTCACCCGGGGCCGAATCGGCATCCAGCGCCTGTCGGTCAGCTTCGGCGCC CATGCGGCGGTCGAGGATTT
Product: ABC-type nitrate/sulfonate/bicarbonate transport system
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MGMTKNFAPSLPLSGSLPPPARPGEGWGGGRLQLRSWALGITSLGLFLAAWHLATLYRLDLHVRFGNVPSPEAVLRRALV AFADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSIMLWPSNEESIVFIT FLGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISGQFGIGYF TWEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWSTASAPLRREARP
Sequences:
>Translated_294_residues MGMTKNFAPSLPLSGSLPPPARPGEGWGGGRLQLRSWALGITSLGLFLAAWHLATLYRLDLHVRFGNVPSPEAVLRRALV AFADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSIMLWPSNEESIVFIT FLGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISGQFGIGYF TWEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWSTASAPLRREARP >Mature_293_residues GMTKNFAPSLPLSGSLPPPARPGEGWGGGRLQLRSWALGITSLGLFLAAWHLATLYRLDLHVRFGNVPSPEAVLRRALVA FADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSIMLWPSNEESIVFITF LGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISGQFGIGYFT WEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWSTASAPLRREARP
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=226, Percent_Identity=33.1858407079646, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI87081802, Length=217, Percent_Identity=34.5622119815668, Blast_Score=114, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31409; Mature: 31277
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMTKNFAPSLPLSGSLPPPARPGEGWGGGRLQLRSWALGITSLGLFLAAWHLATLYRLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVRFGNVPSPEAVLRRALVAFADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFA EEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PLRSAVYPVVEVLRPIPAIAWVPMSIMLWPSNEESIVFITFLGSFFPILINTLHGVAAID HHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH PALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISGQFGIGYF HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH TWEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWSTASAPLRREARP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GMTKNFAPSLPLSGSLPPPARPGEGWGGGRLQLRSWALGITSLGLFLAAWHLATLYRLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVRFGNVPSPEAVLRRALVAFADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFA EEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PLRSAVYPVVEVLRPIPAIAWVPMSIMLWPSNEESIVFITFLGSFFPILINTLHGVAAID HHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH PALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISGQFGIGYF HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH TWEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWSTASAPLRREARP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]