| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ssuA [H]
Identifier: 83310959
GI number: 83310959
Start: 2001002
End: 2002411
Strand: Reverse
Name: ssuA [H]
Synonym: amb1860
Alternate gene names: 83310959
Gene position: 2002411-2001002 (Counterclockwise)
Preceding gene: 83310960
Following gene: 83310958
Centisome position: 40.31
GC content: 64.68
Gene sequence:
>1410_bases ATGAGCCTTCGCACCGCGCTTCTCACCGGCGCCGCCATCCTGGCGCTGACCGCCCCGGCTCAGGCCGGCCAGACGCTGAC CATCGGCATCGGCACCCAGGACACCACCACCAACACGGTGACCGCCGGCGCGGTGATCCGCGAGTTGAAGCTGCTGGACA AATACCTGCCCAAGACCGGCAAATACGCCGATATCACCGTCAAGCTGGACTGGCAGAACTTCACCTCCGGCCCGCCGGTG ACCAACGGCATGATGGCGGGCAAGCTGCAGTTCGGCGCCATGGGCGACTATCCCCTGGTGGTCAACGGCTATACCTTCCA GTCCAATCCCGACGCCAAGAGCCAGCTGATCTCGGTGGCCGCCTACAACATCAACGGTTCCGGCAACGGGCTGGTGGTGC ACAAGGACAGCCCCTATTACGAACTCTCGGACCTGAAGGGCAAGGTGGTCAGCGTCCCCTTCGGCTCGGCCGCCCACGGC ATGCTGCTGAAGACCATGCAGGACAAGGGCTGGGGCGCCGATTACTGGAAGCTGGTGAGCCAAAGCCCCGAGGTGGGTGC CACCAACCTTCAGGAAAAGAAGATCGACGCCCACGCCGATTTCGTGCCCTTCGCCGAGCTGCTGCCCTTCCGCGGCTTCG CCCGCAAGATCTACGACGGGGTGGAAAGCGGCGCCGCCACCTGGCACGGCGTGGTCGTGCGCACCGACTTCGCCGAGAAG TATCCCGAGATCGTCGTGGCCTATCTCAAGGCCCAGATCGAGGCCGAGCAGTGGATCAAGGCCGATCCCAAGCGCGCCGC CGAGCAGATCGCCAAATGGACCGGCATCGACAAGGAAGTGGTCTACATCTTCCTGGGGCCGGGCGGCATCATGACCGTCG ACCCCACCATCAAGCCCGCTTTGGTGGCCGACGCCGCCGACGATGCCCGCGTCCTGCAGAAGCTGGACCGCATCAAGGAT TTCGACGTCGCCAAATGGGTCAACGATTCCTACATCCGCAAGGCCTATGCCGAGCTGGGCCTGAACTACGAGGGCCAGCT GTCCAGCCTGACCAATTACGAGGTCCGGGGCCACGATTCCTTCTGCAAGACCGCCATCGCCGAACCGCGCAAGGCCGGAC AGATCTGGATCGAGAACGGCGACATCGCCGCCTATTCCTCGCCCAAATGCACCCTGGCGGCGTTCAACGACCTGAAGCGC AAGGGCCAGAAGGTCAAGGTAGCCTATCTCTACGACACCACGCTGGGCATCAAGCTGTTCGCCGATCAGGCCTTCTACGC CATCCCCCCCAAGGGCGGCGACGCCACGCCCTTCCTGGTGAAGAAGGACGCCGAGGCCCACGCCGCCCGGATCGGCGGCA AGGTGGCGGGCTTCGACGAAGCCCTGGTGGCGGTGGGCGCCGGGAGCTGA
Upstream 100 bases:
>100_bases CTGGCACAGCACATCAATCTGCTAGATTTTAGATTGACTCCCATGGGGGCGGTCGAGCAACGTCGGGGCAACGCAATTCC TCCCGCAGGAGACAGGGGAC
Downstream 100 bases:
>100_bases TGGGGATGACGAAGAATTTCGCCCCCTCCCTCCCGCTTAGCGGGTCCCTCCCTCCCCCGGCCAGGCCGGGGGAGGGTTGG GGTGGGGGCCGTCTCCAGCT
Product: ABC-type nitrate/sulfonate/bicarbonate transport systems
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSLRTALLTGAAILALTAPAQAGQTLTIGIGTQDTTTNTVTAGAVIRELKLLDKYLPKTGKYADITVKLDWQNFTSGPPV TNGMMAGKLQFGAMGDYPLVVNGYTFQSNPDAKSQLISVAAYNINGSGNGLVVHKDSPYYELSDLKGKVVSVPFGSAAHG MLLKTMQDKGWGADYWKLVSQSPEVGATNLQEKKIDAHADFVPFAELLPFRGFARKIYDGVESGAATWHGVVVRTDFAEK YPEIVVAYLKAQIEAEQWIKADPKRAAEQIAKWTGIDKEVVYIFLGPGGIMTVDPTIKPALVADAADDARVLQKLDRIKD FDVAKWVNDSYIRKAYAELGLNYEGQLSSLTNYEVRGHDSFCKTAIAEPRKAGQIWIENGDIAAYSSPKCTLAAFNDLKR KGQKVKVAYLYDTTLGIKLFADQAFYAIPPKGGDATPFLVKKDAEAHAARIGGKVAGFDEALVAVGAGS
Sequences:
>Translated_469_residues MSLRTALLTGAAILALTAPAQAGQTLTIGIGTQDTTTNTVTAGAVIRELKLLDKYLPKTGKYADITVKLDWQNFTSGPPV TNGMMAGKLQFGAMGDYPLVVNGYTFQSNPDAKSQLISVAAYNINGSGNGLVVHKDSPYYELSDLKGKVVSVPFGSAAHG MLLKTMQDKGWGADYWKLVSQSPEVGATNLQEKKIDAHADFVPFAELLPFRGFARKIYDGVESGAATWHGVVVRTDFAEK YPEIVVAYLKAQIEAEQWIKADPKRAAEQIAKWTGIDKEVVYIFLGPGGIMTVDPTIKPALVADAADDARVLQKLDRIKD FDVAKWVNDSYIRKAYAELGLNYEGQLSSLTNYEVRGHDSFCKTAIAEPRKAGQIWIENGDIAAYSSPKCTLAAFNDLKR KGQKVKVAYLYDTTLGIKLFADQAFYAIPPKGGDATPFLVKKDAEAHAARIGGKVAGFDEALVAVGAGS >Mature_468_residues SLRTALLTGAAILALTAPAQAGQTLTIGIGTQDTTTNTVTAGAVIRELKLLDKYLPKTGKYADITVKLDWQNFTSGPPVT NGMMAGKLQFGAMGDYPLVVNGYTFQSNPDAKSQLISVAAYNINGSGNGLVVHKDSPYYELSDLKGKVVSVPFGSAAHGM LLKTMQDKGWGADYWKLVSQSPEVGATNLQEKKIDAHADFVPFAELLPFRGFARKIYDGVESGAATWHGVVVRTDFAEKY PEIVVAYLKAQIEAEQWIKADPKRAAEQIAKWTGIDKEVVYIFLGPGGIMTVDPTIKPALVADAADDARVLQKLDRIKDF DVAKWVNDSYIRKAYAELGLNYEGQLSSLTNYEVRGHDSFCKTAIAEPRKAGQIWIENGDIAAYSSPKCTLAAFNDLKRK GQKVKVAYLYDTTLGIKLFADQAFYAIPPKGGDATPFLVKKDAEAHAARIGGKVAGFDEALVAVGAGS
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=199, Percent_Identity=31.6582914572864, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87081803, Length=269, Percent_Identity=22.3048327137546, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 50617; Mature: 50486
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRTALLTGAAILALTAPAQAGQTLTIGIGTQDTTTNTVTAGAVIRELKLLDKYLPKTG CCCHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCC KYADITVKLDWQNFTSGPPVTNGMMAGKLQFGAMGDYPLVVNGYTFQSNPDAKSQLISVA CEEEEEEEEECCCCCCCCCCCCCEEECEEEECCCCCCCEEEEEEEECCCCCHHHHEEEEE AYNINGSGNGLVVHKDSPYYELSDLKGKVVSVPFGSAAHGMLLKTMQDKGWGADYWKLVS EEEECCCCCEEEEECCCCCEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHC QSPEVGATNLQEKKIDAHADFVPFAELLPFRGFARKIYDGVESGAATWHGVVVRTDFAEK CCCCCCCCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEECHHHH YPEIVVAYLKAQIEAEQWIKADPKRAAEQIAKWTGIDKEVVYIFLGPGGIMTVDPTIKPA HHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCE LVADAADDARVLQKLDRIKDFDVAKWVNDSYIRKAYAELGLNYEGQLSSLTNYEVRGHDS EEECCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCH FCKTAIAEPRKAGQIWIENGDIAAYSSPKCTLAAFNDLKRKGQKVKVAYLYDTTLGIKLF HHHHHHCCCCCCCEEEEECCCEEEECCCCEEEHHHHHHHHCCCEEEEEEEEECCCCEEEE ADQAFYAIPPKGGDATPFLVKKDAEAHAARIGGKVAGFDEALVAVGAGS ECCEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEECCC >Mature Secondary Structure SLRTALLTGAAILALTAPAQAGQTLTIGIGTQDTTTNTVTAGAVIRELKLLDKYLPKTG CCHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCC KYADITVKLDWQNFTSGPPVTNGMMAGKLQFGAMGDYPLVVNGYTFQSNPDAKSQLISVA CEEEEEEEEECCCCCCCCCCCCCEEECEEEECCCCCCCEEEEEEEECCCCCHHHHEEEEE AYNINGSGNGLVVHKDSPYYELSDLKGKVVSVPFGSAAHGMLLKTMQDKGWGADYWKLVS EEEECCCCCEEEEECCCCCEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHC QSPEVGATNLQEKKIDAHADFVPFAELLPFRGFARKIYDGVESGAATWHGVVVRTDFAEK CCCCCCCCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEECHHHH YPEIVVAYLKAQIEAEQWIKADPKRAAEQIAKWTGIDKEVVYIFLGPGGIMTVDPTIKPA HHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCE LVADAADDARVLQKLDRIKDFDVAKWVNDSYIRKAYAELGLNYEGQLSSLTNYEVRGHDS EEECCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCH FCKTAIAEPRKAGQIWIENGDIAAYSSPKCTLAAFNDLKRKGQKVKVAYLYDTTLGIKLF HHHHHHCCCCCCCEEEEECCCEEEECCCCEEEHHHHHHHHCCCEEEEEEEEECCCCEEEE ADQAFYAIPPKGGDATPFLVKKDAEAHAARIGGKVAGFDEALVAVGAGS ECCEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]