| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310784
Identifier: 83310784
GI number: 83310784
Start: 1825930
End: 1826394
Strand: Reverse
Name: 83310784
Synonym: amb1685
Alternate gene names: NA
Gene position: 1826394-1825930 (Counterclockwise)
Preceding gene: 83310786
Following gene: 83310783
Centisome position: 36.77
GC content: 60.86
Gene sequence:
>465_bases GTGGGCGGAACGAAATTTCATCTTATGCCCGTGCCCCCTTTGGCGCAAGGGTCTTTTGCGGCCCCGTTTTGCCTGCGGCA CTCGGGTCGGGGCCCTATTGTGCCGGGGCACAACAGGCCCATTATACAAATCTGGGGCTTACAAGGACGGGGATGGACCA TGGCGGCAAAGTCGCGCACCGAGATCATCGACGATATCGAGGACTGCATCGGCCGCAATGGCGGTGAATTCGGTCAGTGG TACGTGGGCTTCACCGCCAGTCCGAAGATCAAGTTGTTCTCGGGCCACAAGCTGAAACAAAGCGGCGACGCCTGGATCTC GCGCCTGGCCAAGGACGAGTTCGAGGCTCACGAGGTGGCCGAGTTCTTCCGCACCACGCGCAAGACCAAGGGGCCGGGGG GCCAGCCCAGCGACAACGACCTCTATGTCTACGCCTACAAGATGAAGTCGCACACCAAGCCCTGA
Upstream 100 bases:
>100_bases CGCCGAAAACACCAGGGTCTCCGGCAGCGAGGGGCGGGTTCTATACCCGCCGCCCTACGCCGTCAACCCCATTTGTTTGG AGGCTGGCCGTTCCCCCCGA
Downstream 100 bases:
>100_bases GGCTTGATCCCCCGGGGGGAGCGGTTCATGCTTCGCCTTCCGCTTGACCCCGGGAGGCCGCATGCAGACCCACGCCAGCA ACCGAACCATCGCCGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MGGTKFHLMPVPPLAQGSFAAPFCLRHSGRGPIVPGHNRPIIQIWGLQGRGWTMAAKSRTEIIDDIEDCIGRNGGEFGQW YVGFTASPKIKLFSGHKLKQSGDAWISRLAKDEFEAHEVAEFFRTTRKTKGPGGQPSDNDLYVYAYKMKSHTKP
Sequences:
>Translated_154_residues MGGTKFHLMPVPPLAQGSFAAPFCLRHSGRGPIVPGHNRPIIQIWGLQGRGWTMAAKSRTEIIDDIEDCIGRNGGEFGQW YVGFTASPKIKLFSGHKLKQSGDAWISRLAKDEFEAHEVAEFFRTTRKTKGPGGQPSDNDLYVYAYKMKSHTKP >Mature_153_residues GGTKFHLMPVPPLAQGSFAAPFCLRHSGRGPIVPGHNRPIIQIWGLQGRGWTMAAKSRTEIIDDIEDCIGRNGGEFGQWY VGFTASPKIKLFSGHKLKQSGDAWISRLAKDEFEAHEVAEFFRTTRKTKGPGGQPSDNDLYVYAYKMKSHTKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17118; Mature: 16987
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGTKFHLMPVPPLAQGSFAAPFCLRHSGRGPIVPGHNRPIIQIWGLQGRGWTMAAKSRT CCCCEEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCHH EIIDDIEDCIGRNGGEFGQWYVGFTASPKIKLFSGHKLKQSGDAWISRLAKDEFEAHEVA HHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH EFFRTTRKTKGPGGQPSDNDLYVYAYKMKSHTKP HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure GGTKFHLMPVPPLAQGSFAAPFCLRHSGRGPIVPGHNRPIIQIWGLQGRGWTMAAKSRT CCCEEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCHH EIIDDIEDCIGRNGGEFGQWYVGFTASPKIKLFSGHKLKQSGDAWISRLAKDEFEAHEVA HHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH EFFRTTRKTKGPGGQPSDNDLYVYAYKMKSHTKP HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA