| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is exuT [H]
Identifier: 83310764
GI number: 83310764
Start: 1802150
End: 1803424
Strand: Reverse
Name: exuT [H]
Synonym: amb1665
Alternate gene names: 83310764
Gene position: 1803424-1802150 (Counterclockwise)
Preceding gene: 83310767
Following gene: 83310759
Centisome position: 36.31
GC content: 68.78
Gene sequence:
>1275_bases TTGACCAGGACAACAATGACTGCAACCTCGGAGCACCCCCTCGTCCGCCGCCTGCCCTTCCACTACGCCTGGGCCATCGT CGCCGCCGGCTGCATCGGGCTGTTCGCCGCCCTGGGACTGGGGCGCTTCGCCCTGGGCATGCTGCTGCCGTCCATGGGTC AGTCGCTGGAGCTGTCGCGCAGCGAGATGGGCTGGATCTCCACCGGCAATTTCATCGGCTACATGGCCGCCGTGACCCTG GGCGGACGCATGGTCGCCCGCTGGGGGGCGCGCAACACCGTGGTGGCGGGTCTCGGCCTGGTGGCGCTATCCATGATGGC GGTATCGCGGGCCGAGGGATTTCTCCAGGTTCTGGCACTTTACGTGGTGACCGGATACGGCAGCGGCGCCGCCAACGTGC CGGTCATGGGGCTGATCGCCCACTGGTTCGGCCGAAGGGTGCGGGGCCGTGCCGCCGGTTTCGTGGTGATCGGCTCGGGC TTCGCCATCATGACCGCCGGCGTCCTGATTCCGGCCATCAATGCCGCCCATGGGGCTGAGGGCTGGCGCTTCGCCTGGCT GGTGATCGGCCTGATGGTGCTGGCCACCGCCCTGATCGATCTGCTGGTGCTGCGCAATCATCCGTCCGAGCTGGGCCTTG CGCCGGTCACCGGTGCGCCGGCCGCCGGGGCGGGCACGCCGGCTCCCATCTGTGCCGCCGCCCCGTCGCCCTCGGCCAAG CGCCGCATCCTGGCCCATCTGGGGGCGGTCTACGCCGCCTTCGGCTTCACCTATGTGATCTATGCGACCTTCATCGTCAC CGCCCTGGTGCAGGAGCGCGGCTTTCCCGAATCCACCGCCGGCATGTTCTGGTCGTGGATCGGCTTTCTCTCCCTGGCGT CGGGACCGGTGTTCGGTAGCCTGTCGGACCGCATCGGACGCCGCGCCGGGCTGATGATCGTCTTCAGTTGTCAGGCCGCG GCCTATGTCCTGGTGGCGCTTCCCCTACCCGAGCCGTTCCTCTACGCCTCCATCGCCCTGTTTGGGCTGGTGGTCTGGGC GGTTCCATCCATCATGGCGGCGGCAGTGGGAGATTATCTGGGGCCGGAGCAGGCGGCCTCGTCCTTCGGCACCATCACCC TGATCTTCGCGCTGGGCCAGATCTGTGGACCGGCGGTGGCCGGCTGGATGGCCGATGCCTGGGGCAGCTTTTCCGGCGCC TTCGCCATGGCGGCGGCGGTGGCCGGTCTGGGCGTGGCCGGCGCGGCCTTCCTGCCCAATCCAAAGAGGCATTGA
Upstream 100 bases:
>100_bases TAATCGTAGGCGGCCATGGGAAGTCCCCGGTTGCTGCAATGCGGTCGTCTCAATCAACTTGGCATGCCGGAACGGCCATG CCAAGGTGCCTGGAGAATAG
Downstream 100 bases:
>100_bases GCCCCGTCCGCCATCCGTCACCCCAAGGCGCGGCCTCAGGGTGACGGCCTGCGGTCCGCTCAGTCCCCGGCCAGTTCGCC CATGGCCGCCTGCAGGTAGT
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTRTTMTATSEHPLVRRLPFHYAWAIVAAGCIGLFAALGLGRFALGMLLPSMGQSLELSRSEMGWISTGNFIGYMAAVTL GGRMVARWGARNTVVAGLGLVALSMMAVSRAEGFLQVLALYVVTGYGSGAANVPVMGLIAHWFGRRVRGRAAGFVVIGSG FAIMTAGVLIPAINAAHGAEGWRFAWLVIGLMVLATALIDLLVLRNHPSELGLAPVTGAPAAGAGTPAPICAAAPSPSAK RRILAHLGAVYAAFGFTYVIYATFIVTALVQERGFPESTAGMFWSWIGFLSLASGPVFGSLSDRIGRRAGLMIVFSCQAA AYVLVALPLPEPFLYASIALFGLVVWAVPSIMAAAVGDYLGPEQAASSFGTITLIFALGQICGPAVAGWMADAWGSFSGA FAMAAAVAGLGVAGAAFLPNPKRH
Sequences:
>Translated_424_residues MTRTTMTATSEHPLVRRLPFHYAWAIVAAGCIGLFAALGLGRFALGMLLPSMGQSLELSRSEMGWISTGNFIGYMAAVTL GGRMVARWGARNTVVAGLGLVALSMMAVSRAEGFLQVLALYVVTGYGSGAANVPVMGLIAHWFGRRVRGRAAGFVVIGSG FAIMTAGVLIPAINAAHGAEGWRFAWLVIGLMVLATALIDLLVLRNHPSELGLAPVTGAPAAGAGTPAPICAAAPSPSAK RRILAHLGAVYAAFGFTYVIYATFIVTALVQERGFPESTAGMFWSWIGFLSLASGPVFGSLSDRIGRRAGLMIVFSCQAA AYVLVALPLPEPFLYASIALFGLVVWAVPSIMAAAVGDYLGPEQAASSFGTITLIFALGQICGPAVAGWMADAWGSFSGA FAMAAAVAGLGVAGAAFLPNPKRH >Mature_423_residues TRTTMTATSEHPLVRRLPFHYAWAIVAAGCIGLFAALGLGRFALGMLLPSMGQSLELSRSEMGWISTGNFIGYMAAVTLG GRMVARWGARNTVVAGLGLVALSMMAVSRAEGFLQVLALYVVTGYGSGAANVPVMGLIAHWFGRRVRGRAAGFVVIGSGF AIMTAGVLIPAINAAHGAEGWRFAWLVIGLMVLATALIDLLVLRNHPSELGLAPVTGAPAAGAGTPAPICAAAPSPSAKR RILAHLGAVYAAFGFTYVIYATFIVTALVQERGFPESTAGMFWSWIGFLSLASGPVFGSLSDRIGRRAGLMIVFSCQAAA YVLVALPLPEPFLYASIALFGLVVWAVPSIMAAAVGDYLGPEQAASSFGTITLIFALGQICGPAVAGWMADAWGSFSGAF AMAAAVAGLGVAGAAFLPNPKRH
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43855; Mature: 43724
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTTMTATSEHPLVRRLPFHYAWAIVAAGCIGLFAALGLGRFALGMLLPSMGQSLELSR CCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SEMGWISTGNFIGYMAAVTLGGRMVARWGARNTVVAGLGLVALSMMAVSRAEGFLQVLAL HHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVVTGYGSGAANVPVMGLIAHWFGRRVRGRAAGFVVIGSGFAIMTAGVLIPAINAAHGAE HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC GWRFAWLVIGLMVLATALIDLLVLRNHPSELGLAPVTGAPAAGAGTPAPICAAAPSPSAK CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHH RRILAHLGAVYAAFGFTYVIYATFIVTALVQERGFPESTAGMFWSWIGFLSLASGPVFGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC LSDRIGRRAGLMIVFSCQAAAYVLVALPLPEPFLYASIALFGLVVWAVPSIMAAAVGDYL HHHHHCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GPEQAASSFGTITLIFALGQICGPAVAGWMADAWGSFSGAFAMAAAVAGLGVAGAAFLPN CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHCCCC PKRH CCCC >Mature Secondary Structure TRTTMTATSEHPLVRRLPFHYAWAIVAAGCIGLFAALGLGRFALGMLLPSMGQSLELSR CCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SEMGWISTGNFIGYMAAVTLGGRMVARWGARNTVVAGLGLVALSMMAVSRAEGFLQVLAL HHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVVTGYGSGAANVPVMGLIAHWFGRRVRGRAAGFVVIGSGFAIMTAGVLIPAINAAHGAE HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC GWRFAWLVIGLMVLATALIDLLVLRNHPSELGLAPVTGAPAAGAGTPAPICAAAPSPSAK CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHH RRILAHLGAVYAAFGFTYVIYATFIVTALVQERGFPESTAGMFWSWIGFLSLASGPVFGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC LSDRIGRRAGLMIVFSCQAAAYVLVALPLPEPFLYASIALFGLVVWAVPSIMAAAVGDYL HHHHHCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GPEQAASSFGTITLIFALGQICGPAVAGWMADAWGSFSGAFAMAAAVAGLGVAGAAFLPN CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHCCCC PKRH CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]