| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310759
Identifier: 83310759
GI number: 83310759
Start: 1798571
End: 1799533
Strand: Reverse
Name: 83310759
Synonym: amb1660
Alternate gene names: NA
Gene position: 1799533-1798571 (Counterclockwise)
Preceding gene: 83310764
Following gene: 83310758
Centisome position: 36.23
GC content: 64.49
Gene sequence:
>963_bases GTGCCCCGGGTTATCCCAACCCCGCCCTCCAAGGCAAGGACTTCGAGATCATCGACTTTTGTCTCGGTCTCTGGCATGAC GGAAGGCATGAAACCGCCAGTCTCCAGGCCGCGCATCCTCAATCCCGACGGGTCGAGCAACATCGCCCGCCTGGGCCTGG AAAAGCGTGGCTGGCTCGACGACCATTACCACCACTTGCTGACGGTCTCCTGGCCCGGGTTCTTCGCCGTCATCGCCGGC CTCTATCTGATGGCCAACGCCCTGTTCGCCCTGGCCTATCTGGCCTGCGGCGACGTCATCGAGAACGCCCGGCCGGGATC GTTCACCGATGCCTTCTTCTTCAGCGTCCAGACCATGGCCACCATCGGCTATGGCAAGCTGATCCCGATCGGACCGCTGG CCAACACCCAGGTCACCCTGGAGGCGCTGTGCGGCATGCTGGGGCTGGCGGTGGCCGCCAGCCTGATCTACGCCCGCTTC ACCCGCCCCACCGCCGGGGTGCTGTTCAGTTCCTGCACGGTGGTCACCGAGTTCGAGGGCAAGCCCACCTTGATGATGCG GCTGGCCAATCTCAGGGTCGAACAGATCATCGAGGCCGACGTCCATCTGGTGCTGGTCCGCAGCGAAATCAGCCAGGAAG GCATGCTGTTCCGCCGGTTCCACGACCTGCAGCTGACCCGCTCGCACTCGCCGATCTTTTCGCTGTCGTGGACCATCATG CACCCCATCGACCACCACAGCCCGCTCTATGGCGAGACCGCCGAGACCCTGCGCCACAGCCATTCCGAACTGCTGGTGCT GTTCACCGGCCATCACGAGGCCTTTGCCCAGGATGTCCACGCCCGGCATGCCTATTCCTGCGACGAGATCATCTGGGGCG GCCGGTTCGTGGATGTCTTCACCACCCTGCCCGACGGCCGCCGCGCCCTGGACCTCACCAAGTTCCACGAGATCGCCCAG TGA
Upstream 100 bases:
>100_bases GCCACGCCAGCCCCACCATGACGATCAGGCCCAGCAGGAAGCCGTCGATACCGACGCGGGCGAGAAGCTTGAACACGCGG AACCTCCAGGCGGCGGAACG
Downstream 100 bases:
>100_bases TCAGGATGATCCTGGCTGCGGTCATGCTGCTGCTGTGCCTGCCGGCCCGGGCCGAGGAGGTCGAAGGCAACCGCATCTTC ATCGAGTTCTCCTACGACCC
Product: ATP-sensitive inward rectifier potassium channel 10
Products: NA
Alternate protein names: Ion Transport 2 Domain-Containing Protein; K+ Channel Inward Rectifier; Inward Rectifier Potassium Channel; Inward Rectifier Potassium Channel Protein; Inward Rectifier Potassium Channel Superfamily; TrkA-N Family Protein; ATP-Sensitive Potassium Transporter; Potassium Channel Protein; Inward Rectifier Potassium Channel Irk; ATP-Sensitive Inward Rectifier Potassium Channel; K+ Channel Inward Rectifier Protein; K+ Channel Protein; ATP-Sensitive Potassium Channel Protein; Ion Transport 2 Domain Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MPRVIPTPPSKARTSRSSTFVSVSGMTEGMKPPVSRPRILNPDGSSNIARLGLEKRGWLDDHYHHLLTVSWPGFFAVIAG LYLMANALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTQVTLEALCGMLGLAVAASLIYARF TRPTAGVLFSSCTVVTEFEGKPTLMMRLANLRVEQIIEADVHLVLVRSEISQEGMLFRRFHDLQLTRSHSPIFSLSWTIM HPIDHHSPLYGETAETLRHSHSELLVLFTGHHEAFAQDVHARHAYSCDEIIWGGRFVDVFTTLPDGRRALDLTKFHEIAQ
Sequences:
>Translated_320_residues MPRVIPTPPSKARTSRSSTFVSVSGMTEGMKPPVSRPRILNPDGSSNIARLGLEKRGWLDDHYHHLLTVSWPGFFAVIAG LYLMANALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTQVTLEALCGMLGLAVAASLIYARF TRPTAGVLFSSCTVVTEFEGKPTLMMRLANLRVEQIIEADVHLVLVRSEISQEGMLFRRFHDLQLTRSHSPIFSLSWTIM HPIDHHSPLYGETAETLRHSHSELLVLFTGHHEAFAQDVHARHAYSCDEIIWGGRFVDVFTTLPDGRRALDLTKFHEIAQ >Mature_319_residues PRVIPTPPSKARTSRSSTFVSVSGMTEGMKPPVSRPRILNPDGSSNIARLGLEKRGWLDDHYHHLLTVSWPGFFAVIAGL YLMANALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTQVTLEALCGMLGLAVAASLIYARFT RPTAGVLFSSCTVVTEFEGKPTLMMRLANLRVEQIIEADVHLVLVRSEISQEGMLFRRFHDLQLTRSHSPIFSLSWTIMH PIDHHSPLYGETAETLRHSHSELLVLFTGHHEAFAQDVHARHAYSCDEIIWGGRFVDVFTTLPDGRRALDLTKFHEIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI62388888, Length=300, Percent_Identity=29.3333333333333, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI23110982, Length=306, Percent_Identity=29.0849673202614, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI25777640, Length=322, Percent_Identity=27.3291925465839, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI25777638, Length=322, Percent_Identity=27.3291925465839, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI21361127, Length=322, Percent_Identity=27.3291925465839, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI25121970, Length=313, Percent_Identity=29.7124600638978, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI4504835, Length=305, Percent_Identity=27.5409836065574, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI4826802, Length=327, Percent_Identity=27.82874617737, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI4504839, Length=311, Percent_Identity=28.6173633440514, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI303227939, Length=306, Percent_Identity=28.7581699346405, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4826798, Length=322, Percent_Identity=27.9503105590062, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI23110984, Length=322, Percent_Identity=27.9503105590062, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI24497471, Length=315, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI148539892, Length=315, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI24497467, Length=315, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI24497473, Length=315, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4504837, Length=315, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI25121966, Length=339, Percent_Identity=26.8436578171091, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI8923823, Length=284, Percent_Identity=28.5211267605634, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI25777630, Length=284, Percent_Identity=28.5211267605634, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI25777628, Length=284, Percent_Identity=28.5211267605634, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI239751249, Length=304, Percent_Identity=27.6315789473684, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI310117729, Length=304, Percent_Identity=27.6315789473684, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI261399884, Length=220, Percent_Identity=31.3636363636364, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI4504843, Length=304, Percent_Identity=26.3157894736842, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI24797141, Length=317, Percent_Identity=26.1829652996845, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI25777635, Length=295, Percent_Identity=28.4745762711864, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI7019439, Length=295, Percent_Identity=28.4745762711864, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI156119627, Length=308, Percent_Identity=25.3246753246753, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI289547204, Length=222, Percent_Identity=29.2792792792793, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17568583, Length=310, Percent_Identity=26.7741935483871, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17568581, Length=312, Percent_Identity=25, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71993162, Length=291, Percent_Identity=24.0549828178694, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24649327, Length=366, Percent_Identity=27.5956284153005, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI281362366, Length=317, Percent_Identity=28.391167192429, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24649329, Length=317, Percent_Identity=28.391167192429, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI281362353, Length=317, Percent_Identity=26.1829652996845, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24649234, Length=317, Percent_Identity=26.1829652996845, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI161078534, Length=317, Percent_Identity=25.8675078864353, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI62484243, Length=289, Percent_Identity=25.2595155709343, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI221476063, Length=258, Percent_Identity=25.968992248062, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35501; Mature: 35370
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVIPTPPSKARTSRSSTFVSVSGMTEGMKPPVSRPRILNPDGSSNIARLGLEKRGWLD CCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCC DHYHHLLTVSWPGFFAVIAGLYLMANALFALAYLACGDVIENARPGSFTDAFFFSVQTMA CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TIGYGKLIPIGPLANTQVTLEALCGMLGLAVAASLIYARFTRPTAGVLFSSCTVVTEFEG HCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCC KPTLMMRLANLRVEQIIEADVHLVLVRSEISQEGMLFRRFHDLQLTRSHSPIFSLSWTIM CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHEEECCCCCEEEEEEEEE HPIDHHSPLYGETAETLRHSHSELLVLFTGHHEAFAQDVHARHAYSCDEIIWGGRFVDVF CCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEECCEEEEEE TTLPDGRRALDLTKFHEIAQ ECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PRVIPTPPSKARTSRSSTFVSVSGMTEGMKPPVSRPRILNPDGSSNIARLGLEKRGWLD CCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCC DHYHHLLTVSWPGFFAVIAGLYLMANALFALAYLACGDVIENARPGSFTDAFFFSVQTMA CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TIGYGKLIPIGPLANTQVTLEALCGMLGLAVAASLIYARFTRPTAGVLFSSCTVVTEFEG HCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCC KPTLMMRLANLRVEQIIEADVHLVLVRSEISQEGMLFRRFHDLQLTRSHSPIFSLSWTIM CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHEEECCCCCEEEEEEEEE HPIDHHSPLYGETAETLRHSHSELLVLFTGHHEAFAQDVHARHAYSCDEIIWGGRFVDVF CCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEECCEEEEEE TTLPDGRRALDLTKFHEIAQ ECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA