| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310669
Identifier: 83310669
GI number: 83310669
Start: 1698742
End: 1699971
Strand: Reverse
Name: 83310669
Synonym: amb1570
Alternate gene names: NA
Gene position: 1699971-1698742 (Counterclockwise)
Preceding gene: 83310671
Following gene: 83310668
Centisome position: 34.22
GC content: 65.85
Gene sequence:
>1230_bases ATGAACCGTCTGATTTTGGGGGGTCTTTTGCCCGCGCTGATGCTGTCGGCTTGCGCGTCTCAATCGGGCAAGCTGGCGCC CGACGGCCCCAAGGGAGACCTCAAGGCGTCGCTGCCCTATTTGCGCATGGAGATCGACAACACCAAGACCTGCAAGGGCG TGGTGACCAGCGACCGCCTGGACAGCCAGCAGGGCAGCTACTATGTCCGCCTGGGTGCGCTTTATTCCAGCCAGGACGCC GACACCGCCATGGCCTATGGCGTCCGCACCCGTCCCATGCTGCTGCGCGCCCTGTGGTCGGACAAGACCGGCTTCACCCT GACCGCCACCATCACCGTGGACAGCCAGCCCGCCTATCAGGCCACCGTCCCCCTGTATGCGGTCAGCCACGACAGCGGCC AGCAGGGGGAAAGCTTCACCACCAATCTCGACCTGATCTGGCAGAACACCTTCATCAAGGTGCAGCCCGGCGCCACCCTC AACGTCCAGTTCGAGAGCAAGTTCTCCAAGACCGTGGAGACCGGGGCCCTCAGCGCCGCCCTCCGGGTGGCCAAGGTGGC CACCACCGCCATGGCGCCCGAGGCCAAGATCCTCACCACCCTCAACCAGGGGCGCATGCAGACCGAGGCGCGGCTGTGGG ACAAGGCGCTGGGCCAGCTCTTCGCCCAGAATGCCACGGAGCAGATCAGCCTGGTGACCACCCCGGAGCAGATCGGCAGC AATTCCTGCGGCGTCGTCACCCTCTATGCCCCCGGCTATAACGAGGAGATCGATCCCCAGATGAAGATCGGCACGTGGCG GGTGGGGGTCAACGACTGGCGGCGCTCCATCTTCACCGACGCGGCCTGCCTGACCAAGGCCCTCGATGGGGGATGCGCCT CGGACGTGATCTCCAAGCTGACCCCCATGCGCGTCCTGGACGAGCCGGTGGGCGGCGGCAAGAGCATCGGCACCTTCCTC AAGGAGCAGGACATCGTCCCCATCGCCATCAGCCAGACCGACAGCGAAGTCCAGAAGCAGGAGGCCTCGTCCTTCTGCCG CCGGGTCACCACCTCGCTGGTGTCCCTGGGCCTGACCGACATCGACGCCAAGCTGGGGCTTTGGGCCTTCGCCATGGGCT ATCCCATGCCCACCGAGATCTCCGACGCCCTGACCCAGCATCCCGACTGCCAGAACCAGATCCGGCCGTTCGAGTTCCGT CTGCCCGTCAGCCTGGGCACCAGCCGCTAA
Upstream 100 bases:
>100_bases TATTCAATGCAATTAGGATTCCGCGTTAGCATTTACCGCGCATATATATACATGTATAAATTAAGCATTATGCGACGACT GACACCGAAGGGGGATTGGA
Downstream 100 bases:
>100_bases AAGCAGCGCATCCCCGACACCGGCCATTGTCGCATGTCCGACAATGGCCGGTTGCCGTTTGCGCACCCCCCAGCATTTCC GCCACTTTTACTAATGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNRLILGGLLPALMLSACASQSGKLAPDGPKGDLKASLPYLRMEIDNTKTCKGVVTSDRLDSQQGSYYVRLGALYSSQDA DTAMAYGVRTRPMLLRALWSDKTGFTLTATITVDSQPAYQATVPLYAVSHDSGQQGESFTTNLDLIWQNTFIKVQPGATL NVQFESKFSKTVETGALSAALRVAKVATTAMAPEAKILTTLNQGRMQTEARLWDKALGQLFAQNATEQISLVTTPEQIGS NSCGVVTLYAPGYNEEIDPQMKIGTWRVGVNDWRRSIFTDAACLTKALDGGCASDVISKLTPMRVLDEPVGGGKSIGTFL KEQDIVPIAISQTDSEVQKQEASSFCRRVTTSLVSLGLTDIDAKLGLWAFAMGYPMPTEISDALTQHPDCQNQIRPFEFR LPVSLGTSR
Sequences:
>Translated_409_residues MNRLILGGLLPALMLSACASQSGKLAPDGPKGDLKASLPYLRMEIDNTKTCKGVVTSDRLDSQQGSYYVRLGALYSSQDA DTAMAYGVRTRPMLLRALWSDKTGFTLTATITVDSQPAYQATVPLYAVSHDSGQQGESFTTNLDLIWQNTFIKVQPGATL NVQFESKFSKTVETGALSAALRVAKVATTAMAPEAKILTTLNQGRMQTEARLWDKALGQLFAQNATEQISLVTTPEQIGS NSCGVVTLYAPGYNEEIDPQMKIGTWRVGVNDWRRSIFTDAACLTKALDGGCASDVISKLTPMRVLDEPVGGGKSIGTFL KEQDIVPIAISQTDSEVQKQEASSFCRRVTTSLVSLGLTDIDAKLGLWAFAMGYPMPTEISDALTQHPDCQNQIRPFEFR LPVSLGTSR >Mature_409_residues MNRLILGGLLPALMLSACASQSGKLAPDGPKGDLKASLPYLRMEIDNTKTCKGVVTSDRLDSQQGSYYVRLGALYSSQDA DTAMAYGVRTRPMLLRALWSDKTGFTLTATITVDSQPAYQATVPLYAVSHDSGQQGESFTTNLDLIWQNTFIKVQPGATL NVQFESKFSKTVETGALSAALRVAKVATTAMAPEAKILTTLNQGRMQTEARLWDKALGQLFAQNATEQISLVTTPEQIGS NSCGVVTLYAPGYNEEIDPQMKIGTWRVGVNDWRRSIFTDAACLTKALDGGCASDVISKLTPMRVLDEPVGGGKSIGTFL KEQDIVPIAISQTDSEVQKQEASSFCRRVTTSLVSLGLTDIDAKLGLWAFAMGYPMPTEISDALTQHPDCQNQIRPFEFR LPVSLGTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44284; Mature: 44284
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLILGGLLPALMLSACASQSGKLAPDGPKGDLKASLPYLRMEIDNTKTCKGVVTSDRL CCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC DSQQGSYYVRLGALYSSQDADTAMAYGVRTRPMLLRALWSDKTGFTLTATITVDSQPAYQ CCCCCCEEEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCE ATVPLYAVSHDSGQQGESFTTNLDLIWQNTFIKVQPGATLNVQFESKFSKTVETGALSAA EEEEEEEEECCCCCCCCCEECCEEEEEECEEEEECCCCEEEEEEHHHHHHHHHHHHHHHH LRVAKVATTAMAPEAKILTTLNQGRMQTEARLWDKALGQLFAQNATEQISLVTTPEQIGS HHHHHHHHHHCCCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCC NSCGVVTLYAPGYNEEIDPQMKIGTWRVGVNDWRRSIFTDAACLTKALDGGCASDVISKL CCCCEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC TPMRVLDEPVGGGKSIGTFLKEQDIVPIAISQTDSEVQKQEASSFCRRVTTSLVSLGLTD CCHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC IDAKLGLWAFAMGYPMPTEISDALTQHPDCQNQIRPFEFRLPVSLGTSR CHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEEECCCCC >Mature Secondary Structure MNRLILGGLLPALMLSACASQSGKLAPDGPKGDLKASLPYLRMEIDNTKTCKGVVTSDRL CCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC DSQQGSYYVRLGALYSSQDADTAMAYGVRTRPMLLRALWSDKTGFTLTATITVDSQPAYQ CCCCCCEEEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCE ATVPLYAVSHDSGQQGESFTTNLDLIWQNTFIKVQPGATLNVQFESKFSKTVETGALSAA EEEEEEEEECCCCCCCCCEECCEEEEEECEEEEECCCCEEEEEEHHHHHHHHHHHHHHHH LRVAKVATTAMAPEAKILTTLNQGRMQTEARLWDKALGQLFAQNATEQISLVTTPEQIGS HHHHHHHHHHCCCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCC NSCGVVTLYAPGYNEEIDPQMKIGTWRVGVNDWRRSIFTDAACLTKALDGGCASDVISKL CCCCEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC TPMRVLDEPVGGGKSIGTFLKEQDIVPIAISQTDSEVQKQEASSFCRRVTTSLVSLGLTD CCHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC IDAKLGLWAFAMGYPMPTEISDALTQHPDCQNQIRPFEFRLPVSLGTSR CHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA