| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310643
Identifier: 83310643
GI number: 83310643
Start: 1673844
End: 1675205
Strand: Reverse
Name: 83310643
Synonym: amb1544
Alternate gene names: NA
Gene position: 1675205-1673844 (Counterclockwise)
Preceding gene: 83310646
Following gene: 83310635
Centisome position: 33.73
GC content: 66.59
Gene sequence:
>1362_bases GTGCTGACCGCGCTGGCTTCCGTGACCCTGCACGATGCCGTGCACCGCATGTATGAGGCGCGGGTGTCGTCCATCGTCGG CATCGATGCCGAGGGCCGGACGCTCGGCATCTTCACCGAGCGGGACCTGCTGCGCATCCTGTCCACCAACGGCCCGGCCG GTCTGGAACAGACCCTGGACCAGACCATGACCAAGCCGGTGGCCACCGTCTCGGCCGAGGCCTATGTCTATGTGGCCCTG GCGCGCATGACGCGGTTGGGCCTACGCCATCTGGTGGTGGTCGACGAGGACAACCGCCCGCTGGGCATGATCACCGGCCG CGCCTTGCTCAAGGTCCGCGCCACCGAGGCGCTGGTGCTGGGCGACTCGGCGGAAAGCGCCAGCAATCCCGACGAGATGA AGGCGGTGATGACCAACCTGCCCAAGCTGGCCAAGAGCCTGCTGGGCGAGGGGGTGACGGCGCGCAACATCGCCTCGGTC ATCGCCCTGGTGCTGCGCGACCTGACGGCGCGGGCGTCCGAACTGGCCGAGCAATCGCTGCTGGACGACGGTTGGGGTCC CGCCCCCGCCCGCTATGCCGTGCTGATCCTGGGGTCGGGCGGCCGCGGCGAGAGCCTGCTGGCCTTCGATCAGGACAACG CCATCGTCCATGACGGCAAGCCCGCCGACGATCCCTGGTTCGCCGAACTGGGCAAGCGCCTCAACGAGACCCTGAACAAG GCCGGCATTCCGTTTTGCGACGGCAACGTCATGGCCCGCGAGTCCAAGTGGCGCAAGAGCCTGGAAGAATGGCGCGACGA AGTCCATGGCTGGGTGTTCTCGGTCGAGAACCAGACCGTCATGTATTGCGACATCTTCTTCGACTTCCAGCCGGTGTGGG GCGATCGCGCCCTGGCCGAGGAACTGCGCCACATGGCCATGGAGAAGGCGGCGCAATCGGCGTTCTTCCTGCGCTATCTT GCCCAGAACGTGGCGGGCATGGACGGCTCCATCGGCCTGTTCGGCAATTTCGTCACCAAGCAGGGCCGCCTGAACGCCAA GAAGTTCGGCCTGCTGCCCCTGGTCAGCGCGGCGCGCATGCGGGCCATCCGCGCCCATATCCAGGTCACCGGCACCGACG AGCGCTTCGCCGCGCTGAAGGAATCCGGCGTGCTGCACGAGGATGACCTGCGCGACTTCGTCGAGGTGCGGGAAATCGTG CTGCGCGTCATGCTGGAACAGCAACTGGCCGACATCGCCCAGCAGATTCCTGCCTCGGCCAAGATCGACCCCAAGCGCTT CGACAAGCGCACCCGCAATCGCCTGAAATGGGCGTTCCGCCGCATCAAGACCCTGAAATTCGTCTGCGGCGTGGGGGGCT AG
Upstream 100 bases:
>100_bases CCGCCACTATCGTACACGCGCCATGAATGACATTGCCGCCCTTGCCAGAATCGACAGTTTTCCCTATCGCCACCGCCTTC GCGAGGTGATGAGCGCACCG
Downstream 100 bases:
>100_bases AACGGGGCTCCCGCCCCCCGTTCTCGGTAAGATGGGCCCTGGCTGGAGGCGATCCCTCCAGACCTCCCTTTTATTTATGA ATCAAAATGGGGTCCGGGGC
Product: signal transduction protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; DNA Polymerase III Epsilon Subunit; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Nucleotidyltransferases
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MLTALASVTLHDAVHRMYEARVSSIVGIDAEGRTLGIFTERDLLRILSTNGPAGLEQTLDQTMTKPVATVSAEAYVYVAL ARMTRLGLRHLVVVDEDNRPLGMITGRALLKVRATEALVLGDSAESASNPDEMKAVMTNLPKLAKSLLGEGVTARNIASV IALVLRDLTARASELAEQSLLDDGWGPAPARYAVLILGSGGRGESLLAFDQDNAIVHDGKPADDPWFAELGKRLNETLNK AGIPFCDGNVMARESKWRKSLEEWRDEVHGWVFSVENQTVMYCDIFFDFQPVWGDRALAEELRHMAMEKAAQSAFFLRYL AQNVAGMDGSIGLFGNFVTKQGRLNAKKFGLLPLVSAARMRAIRAHIQVTGTDERFAALKESGVLHEDDLRDFVEVREIV LRVMLEQQLADIAQQIPASAKIDPKRFDKRTRNRLKWAFRRIKTLKFVCGVGG
Sequences:
>Translated_453_residues MLTALASVTLHDAVHRMYEARVSSIVGIDAEGRTLGIFTERDLLRILSTNGPAGLEQTLDQTMTKPVATVSAEAYVYVAL ARMTRLGLRHLVVVDEDNRPLGMITGRALLKVRATEALVLGDSAESASNPDEMKAVMTNLPKLAKSLLGEGVTARNIASV IALVLRDLTARASELAEQSLLDDGWGPAPARYAVLILGSGGRGESLLAFDQDNAIVHDGKPADDPWFAELGKRLNETLNK AGIPFCDGNVMARESKWRKSLEEWRDEVHGWVFSVENQTVMYCDIFFDFQPVWGDRALAEELRHMAMEKAAQSAFFLRYL AQNVAGMDGSIGLFGNFVTKQGRLNAKKFGLLPLVSAARMRAIRAHIQVTGTDERFAALKESGVLHEDDLRDFVEVREIV LRVMLEQQLADIAQQIPASAKIDPKRFDKRTRNRLKWAFRRIKTLKFVCGVGG >Mature_453_residues MLTALASVTLHDAVHRMYEARVSSIVGIDAEGRTLGIFTERDLLRILSTNGPAGLEQTLDQTMTKPVATVSAEAYVYVAL ARMTRLGLRHLVVVDEDNRPLGMITGRALLKVRATEALVLGDSAESASNPDEMKAVMTNLPKLAKSLLGEGVTARNIASV IALVLRDLTARASELAEQSLLDDGWGPAPARYAVLILGSGGRGESLLAFDQDNAIVHDGKPADDPWFAELGKRLNETLNK AGIPFCDGNVMARESKWRKSLEEWRDEVHGWVFSVENQTVMYCDIFFDFQPVWGDRALAEELRHMAMEKAAQSAFFLRYL AQNVAGMDGSIGLFGNFVTKQGRLNAKKFGLLPLVSAARMRAIRAHIQVTGTDERFAALKESGVLHEDDLRDFVEVREIV LRVMLEQQLADIAQQIPASAKIDPKRFDKRTRNRLKWAFRRIKTLKFVCGVGG
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50060; Mature: 50060
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTALASVTLHDAVHRMYEARVSSIVGIDAEGRTLGIFTERDLLRILSTNGPAGLEQTLD CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHH QTMTKPVATVSAEAYVYVALARMTRLGLRHLVVVDEDNRPLGMITGRALLKVRATEALVL HHHHCCHHHHCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEHHHHHEEECCEEEEE GDSAESASNPDEMKAVMTNLPKLAKSLLGEGVTARNIASVIALVLRDLTARASELAEQSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDDGWGPAPARYAVLILGSGGRGESLLAFDQDNAIVHDGKPADDPWFAELGKRLNETLNK HCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHH AGIPFCDGNVMARESKWRKSLEEWRDEVHGWVFSVENQTVMYCDIFFDFQPVWGDRALAE CCCCEECCCEEEHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEECCCCCCCHHHHH ELRHMAMEKAAQSAFFLRYLAQNVAGMDGSIGLFGNFVTKQGRLNAKKFGLLPLVSAARM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHCHHHHHHHHHH RAIRAHIQVTGTDERFAALKESGVLHEDDLRDFVEVREIVLRVMLEQQLADIAQQIPASA HHHHHHEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KIDPKRFDKRTRNRLKWAFRRIKTLKFVCGVGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLTALASVTLHDAVHRMYEARVSSIVGIDAEGRTLGIFTERDLLRILSTNGPAGLEQTLD CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHH QTMTKPVATVSAEAYVYVALARMTRLGLRHLVVVDEDNRPLGMITGRALLKVRATEALVL HHHHCCHHHHCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEHHHHHEEECCEEEEE GDSAESASNPDEMKAVMTNLPKLAKSLLGEGVTARNIASVIALVLRDLTARASELAEQSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDDGWGPAPARYAVLILGSGGRGESLLAFDQDNAIVHDGKPADDPWFAELGKRLNETLNK HCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHH AGIPFCDGNVMARESKWRKSLEEWRDEVHGWVFSVENQTVMYCDIFFDFQPVWGDRALAE CCCCEECCCEEEHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEECCCCCCCHHHHH ELRHMAMEKAAQSAFFLRYLAQNVAGMDGSIGLFGNFVTKQGRLNAKKFGLLPLVSAARM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHCHHHHHHHHHH RAIRAHIQVTGTDERFAALKESGVLHEDDLRDFVEVREIVLRVMLEQQLADIAQQIPASA HHHHHHEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KIDPKRFDKRTRNRLKWAFRRIKTLKFVCGVGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA