Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310632

Identifier: 83310632

GI number: 83310632

Start: 1662978

End: 1663457

Strand: Reverse

Name: 83310632

Synonym: amb1533

Alternate gene names: NA

Gene position: 1663457-1662978 (Counterclockwise)

Preceding gene: 83310635

Following gene: 83310631

Centisome position: 33.49

GC content: 70.21

Gene sequence:

>480_bases
ATGAATACCGCGCTTCGCCCCATCGCCCTTTCGGTCGCCGGCATCTGCCTCGCCGCCCTGGCCTTCGCCCTGGTCGCCCA
GTATGGGTTCGGCCTGCGCCCCTGCAATCTCTGCCTGATCCAGCGGGTGCCGTTCGTCCTGGCCGCCCTGCTGGCCGCCG
CGGCCCTGAGGGACGGAGCGCCCGCCGCCCTGCTGCTGCGCATCGCCGGTCTGCTGCTGCTGATCAACGGCGGCATCGCG
GTCTATCACGTGGGGGTCGAACAGCATTGGTGGGCCTCGGCGGTATGCTCCGGCAACCAGGGGGGCGAGATCGCCGTGGC
CGATCTGCTGGCCGAGATGAACAAGCCGGCGGAAGCCCAGTGCGACACCCCGGCCTGGTCGTTCCACGGCATCACCATGG
CCGCCCTCAACGTGCCGTTCTCGGCCCTGTTCGGCCTTGCGGTGCTGTGGGCGGCACGGCGTTCGGAGGGCTCCGCATGA

Upstream 100 bases:

>100_bases
GCCAGAAGCGGCGGGGGTCCTTTCGCCAGAAGCGGCGGCGATTGTGTGCGGCACGGGTAAGGGTGGTCAAGCGTCGGCGT
GGCCATTATAGTGCGGTGCG

Downstream 100 bases:

>100_bases
GAAAGACCGGCGACGACGCCATTCCCGGCGACCTCGACCATGCCGGCCTGATCGACCGCTTCCTGCGGGTCAATCAGGCG
GGAGAGCTGGGCGCCGTGCG

Product: disulfide bond formation protein DsbB

Products: NA

Alternate protein names: Disulfide Bond Formation Protein DsbB

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNTALRPIALSVAGICLAALAFALVAQYGFGLRPCNLCLIQRVPFVLAALLAAAALRDGAPAALLLRIAGLLLLINGGIA
VYHVGVEQHWWASAVCSGNQGGEIAVADLLAEMNKPAEAQCDTPAWSFHGITMAALNVPFSALFGLAVLWAARRSEGSA

Sequences:

>Translated_159_residues
MNTALRPIALSVAGICLAALAFALVAQYGFGLRPCNLCLIQRVPFVLAALLAAAALRDGAPAALLLRIAGLLLLINGGIA
VYHVGVEQHWWASAVCSGNQGGEIAVADLLAEMNKPAEAQCDTPAWSFHGITMAALNVPFSALFGLAVLWAARRSEGSA
>Mature_159_residues
MNTALRPIALSVAGICLAALAFALVAQYGFGLRPCNLCLIQRVPFVLAALLAAAALRDGAPAALLLRIAGLLLLINGGIA
VYHVGVEQHWWASAVCSGNQGGEIAVADLLAEMNKPAEAQCDTPAWSFHGITMAALNVPFSALFGLAVLWAARRSEGSA

Specific function: Unknown

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16464; Mature: 16464

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTALRPIALSVAGICLAALAFALVAQYGFGLRPCNLCLIQRVPFVLAALLAAAALRDGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAALLLRIAGLLLLINGGIAVYHVGVEQHWWASAVCSGNQGGEIAVADLLAEMNKPAEAQ
CHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
CDTPAWSFHGITMAALNVPFSALFGLAVLWAARRSEGSA
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTALRPIALSVAGICLAALAFALVAQYGFGLRPCNLCLIQRVPFVLAALLAAAALRDGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAALLLRIAGLLLLINGGIAVYHVGVEQHWWASAVCSGNQGGEIAVADLLAEMNKPAEAQ
CHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
CDTPAWSFHGITMAALNVPFSALFGLAVLWAARRSEGSA
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA