| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is livG [H]
Identifier: 83310575
GI number: 83310575
Start: 1613167
End: 1613952
Strand: Reverse
Name: livG [H]
Synonym: amb1476
Alternate gene names: 83310575
Gene position: 1613952-1613167 (Counterclockwise)
Preceding gene: 83310576
Following gene: 83310574
Centisome position: 32.49
GC content: 65.39
Gene sequence:
>786_bases ATGAGCCAGAACCAGACCCTGTCCGTCCGCGGACTGTCCAAGAATTATGGCGGTGTCGCCGCCGTGACCAACGTGGATTT CGATCTGGCGCCGGGCGAGATCCTGGCCCTGATCGGTCCCAACGGCGCGGGGAAAAGCACCTGCTTCAACATGCTGAACG GCCAGTTTCCACCCACCGCCGGCAGCATCAAGCTGTTCGGCGAGGAACTGGTGGGCAAGAAGCCCCGCGAGATCTGGCGC CTGGGGGTGGGACGCACCTTCCAGATCACCGCCACCTTCGGCTCCATGACCGTGCTGGAGAACGTCCAGATGGCACTGAT CTCGTTCCACAACCGGCTGCGCGCCCTGTGGCCCTTCGCCGGCGGCCTCTATCAGGACGAGGCCTTCCAGCTCCTGGAAC TGGTGGGCATGGAGGCCCAGGCGTCGCGGCCGTGCAGCGTGCTGGCCTATGGCGACCTGAAGCGGGTGGAACTGGCCGTG GCCCTGGCCAACGCGCCCAAGCTGCTGCTCATGGACGAACCCACCGCCGGCATGGCGCCCAAGGAACGCATCGAGCTGAT GCAGCTGACCGCCGACATCGTCAGGGAGCGCGGCATCAGCGTCCTGTTCACCGAGCACGACATGGACGTGGTCTTCACCC ACGCCAACCGCATCATGGTCCTGAGCCGCGGCCATGTGGTGGCCGAGGGCAAGCCGCAAGAGGTGCGCGCCAATCCCGAG GTGCAGGCCACCTATCTGGGTACCGGCGCGGTCTATGACGATTCCAAGCACAAAGGTGCGGCATGA
Upstream 100 bases:
>100_bases TGGGCGTGATCATCATCGTGCTGGTGGTGGCCTTCCCCCAGGGCATCTCCGGCTTCGTCCAGGGCCGACTGACACGCTCC GAGCCCAAGGAGGACGCGGC
Downstream 100 bases:
>100_bases AACTGGAAGCCCATAACCTCAACGCCTTTTACGGCCGCGCCCAGATCCTGTTCGACGTGGGGCTGAAGGCCGGAGCCGGC GAAGTGGTGGCGCTGATCGG
Product: ABC-type branched-chain amino acid transport systems
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSQNQTLSVRGLSKNYGGVAAVTNVDFDLAPGEILALIGPNGAGKSTCFNMLNGQFPPTAGSIKLFGEELVGKKPREIWR LGVGRTFQITATFGSMTVLENVQMALISFHNRLRALWPFAGGLYQDEAFQLLELVGMEAQASRPCSVLAYGDLKRVELAV ALANAPKLLLMDEPTAGMAPKERIELMQLTADIVRERGISVLFTEHDMDVVFTHANRIMVLSRGHVVAEGKPQEVRANPE VQATYLGTGAVYDDSKHKGAA
Sequences:
>Translated_261_residues MSQNQTLSVRGLSKNYGGVAAVTNVDFDLAPGEILALIGPNGAGKSTCFNMLNGQFPPTAGSIKLFGEELVGKKPREIWR LGVGRTFQITATFGSMTVLENVQMALISFHNRLRALWPFAGGLYQDEAFQLLELVGMEAQASRPCSVLAYGDLKRVELAV ALANAPKLLLMDEPTAGMAPKERIELMQLTADIVRERGISVLFTEHDMDVVFTHANRIMVLSRGHVVAEGKPQEVRANPE VQATYLGTGAVYDDSKHKGAA >Mature_260_residues SQNQTLSVRGLSKNYGGVAAVTNVDFDLAPGEILALIGPNGAGKSTCFNMLNGQFPPTAGSIKLFGEELVGKKPREIWRL GVGRTFQITATFGSMTVLENVQMALISFHNRLRALWPFAGGLYQDEAFQLLELVGMEAQASRPCSVLAYGDLKRVELAVA LANAPKLLLMDEPTAGMAPKERIELMQLTADIVRERGISVLFTEHDMDVVFTHANRIMVLSRGHVVAEGKPQEVRANPEV QATYLGTGAVYDDSKHKGAA
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=245, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI47078218, Length=245, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI150417984, Length=232, Percent_Identity=29.3103448275862, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI116734710, Length=211, Percent_Identity=29.8578199052133, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI27436953, Length=237, Percent_Identity=29.1139240506329, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI27262624, Length=224, Percent_Identity=30.8035714285714, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI27262626, Length=224, Percent_Identity=30.8035714285714, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI153792144, Length=231, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27881501, Length=226, Percent_Identity=25.2212389380531, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI27477115, Length=231, Percent_Identity=28.1385281385281, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI30795238, Length=226, Percent_Identity=25.2212389380531, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI21536376, Length=227, Percent_Identity=28.1938325991189, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI31657092, Length=227, Percent_Identity=27.7533039647577, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI105990541, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI9955968, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI9955966, Length=220, Percent_Identity=26.8181818181818, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI45243524, Length=220, Percent_Identity=26.8181818181818, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI6005701, Length=228, Percent_Identity=24.5614035087719, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI9665248, Length=237, Percent_Identity=26.1603375527426, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI9955963, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=42.0634920634921, Blast_Score=190, Evalue=9e-50, Organism=Escherichia coli, GI87081791, Length=258, Percent_Identity=33.7209302325581, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1789593, Length=242, Percent_Identity=33.0578512396694, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1788210, Length=240, Percent_Identity=31.6666666666667, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI87081782, Length=232, Percent_Identity=31.4655172413793, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1787029, Length=241, Percent_Identity=30.7053941908714, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1790544, Length=257, Percent_Identity=31.5175097276265, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=29.4871794871795, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787712, Length=249, Percent_Identity=30.1204819277108, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=32.6086956521739, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=31.7391304347826, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788165, Length=244, Percent_Identity=29.5081967213115, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI87081709, Length=257, Percent_Identity=26.4591439688716, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=29.1304347826087, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=32.1428571428571, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789672, Length=245, Percent_Identity=29.3877551020408, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786803, Length=243, Percent_Identity=27.1604938271605, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790190, Length=224, Percent_Identity=28.125, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789032, Length=246, Percent_Identity=30.0813008130081, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1789991, Length=221, Percent_Identity=30.316742081448, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082268, Length=248, Percent_Identity=30.6451612903226, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786563, Length=222, Percent_Identity=31.5315315315315, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787792, Length=237, Percent_Identity=27.8481012658228, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788897, Length=225, Percent_Identity=29.3333333333333, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786345, Length=242, Percent_Identity=26.0330578512397, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI87081834, Length=230, Percent_Identity=29.1304347826087, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786872, Length=230, Percent_Identity=29.5652173913043, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=26.5560165975104, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=29.0598290598291, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788450, Length=229, Percent_Identity=29.2576419213974, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=31.651376146789, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788225, Length=246, Percent_Identity=28.8617886178862, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1790739, Length=234, Percent_Identity=29.4871794871795, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788472, Length=227, Percent_Identity=25.5506607929515, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082267, Length=261, Percent_Identity=27.2030651340996, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787164, Length=226, Percent_Identity=28.3185840707965, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790467, Length=237, Percent_Identity=25.7383966244726, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789586, Length=236, Percent_Identity=29.2372881355932, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787500, Length=227, Percent_Identity=29.0748898678414, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=30.9322033898305, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786698, Length=222, Percent_Identity=29.7297297297297, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI145693107, Length=223, Percent_Identity=30.9417040358744, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=28.4552845528455, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787759, Length=235, Percent_Identity=27.6595744680851, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=26.7857142857143, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=26.9058295964126, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=26.8518518518519, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788644, Length=257, Percent_Identity=29.1828793774319, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787548, Length=271, Percent_Identity=26.9372693726937, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787547, Length=251, Percent_Identity=27.4900398406374, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788506, Length=230, Percent_Identity=25.2173913043478, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787105, Length=214, Percent_Identity=26.6355140186916, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994883, Length=254, Percent_Identity=27.1653543307087, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788002, Length=229, Percent_Identity=28.3842794759825, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787758, Length=240, Percent_Identity=23.75, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790162, Length=250, Percent_Identity=23.6, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786703, Length=236, Percent_Identity=26.271186440678, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786975, Length=205, Percent_Identity=24.390243902439, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788053, Length=209, Percent_Identity=29.6650717703349, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789963, Length=248, Percent_Identity=25.4032258064516, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1789890, Length=228, Percent_Identity=28.5087719298246, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71983516, Length=239, Percent_Identity=30.9623430962343, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71983510, Length=239, Percent_Identity=30.9623430962343, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71983523, Length=239, Percent_Identity=30.9623430962343, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115533608, Length=238, Percent_Identity=29.4117647058824, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17565586, Length=249, Percent_Identity=28.9156626506024, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17510237, Length=250, Percent_Identity=25.6, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI193208177, Length=221, Percent_Identity=30.316742081448, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24666092, Length=224, Percent_Identity=29.0178571428571, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24643674, Length=224, Percent_Identity=29.4642857142857, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI116007184, Length=224, Percent_Identity=27.2321428571429, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI221500365, Length=224, Percent_Identity=27.2321428571429, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI28574150, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI116007328, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648314, Length=234, Percent_Identity=26.9230769230769, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI221512771, Length=230, Percent_Identity=27.3913043478261, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI28571209, Length=237, Percent_Identity=26.1603375527426, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI28573571, Length=254, Percent_Identity=26.7716535433071, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28573573, Length=254, Percent_Identity=26.7716535433071, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI85725262, Length=244, Percent_Identity=27.8688524590164, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI161076684, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581617, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581615, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161076682, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17647959, Length=254, Percent_Identity=29.9212598425197, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581407, Length=245, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI45552199, Length=245, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28273; Mature: 28142
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNQTLSVRGLSKNYGGVAAVTNVDFDLAPGEILALIGPNGAGKSTCFNMLNGQFPPTA CCCCCEEEEEECCCCCCCEEEEEECCCEECCCEEEEEECCCCCCHHHHHHHHCCCCCCCC GSIKLFGEELVGKKPREIWRLGVGRTFQITATFGSMTVLENVQMALISFHNRLRALWPFA CCEEEECHHHCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC GGLYQDEAFQLLELVGMEAQASRPCSVLAYGDLKRVELAVALANAPKLLLMDEPTAGMAP CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCCH KERIELMQLTADIVRERGISVLFTEHDMDVVFTHANRIMVLSRGHVVAEGKPQEVRANPE HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEEECCEEEECCCCCCCCCCCC VQATYLGTGAVYDDSKHKGAA EEEEEEECCCEECCCCCCCCC >Mature Secondary Structure SQNQTLSVRGLSKNYGGVAAVTNVDFDLAPGEILALIGPNGAGKSTCFNMLNGQFPPTA CCCCEEEEEECCCCCCCEEEEEECCCEECCCEEEEEECCCCCCHHHHHHHHCCCCCCCC GSIKLFGEELVGKKPREIWRLGVGRTFQITATFGSMTVLENVQMALISFHNRLRALWPFA CCEEEECHHHCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC GGLYQDEAFQLLELVGMEAQASRPCSVLAYGDLKRVELAVALANAPKLLLMDEPTAGMAP CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCCH KERIELMQLTADIVRERGISVLFTEHDMDVVFTHANRIMVLSRGHVVAEGKPQEVRANPE HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEEECCEEEECCCCCCCCCCCC VQATYLGTGAVYDDSKHKGAA EEEEEEECCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]