| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310559
Identifier: 83310559
GI number: 83310559
Start: 1591449
End: 1591982
Strand: Reverse
Name: 83310559
Synonym: amb1460
Alternate gene names: NA
Gene position: 1591982-1591449 (Counterclockwise)
Preceding gene: 83310566
Following gene: 83310558
Centisome position: 32.05
GC content: 61.99
Gene sequence:
>534_bases ATGACGGAGGCATTTCTTGGCGAGATTCGCCTTTTTCCACTGAACTGGGCCCCGACGGGCTGGCTGCCCTGTGACGGCCG CTCCATGCAGGTATCCGCCAATGCGGCCCTGTTCTCCCTGCTGGGCAACCAATTCGGCGGTGACGCAAAGACGACCTTCT TCCTGCCCGATCTCCGCGGCCGCACCATCATGGGGCAGGGAAAAAACCCGGTGACAGGCGTCTCGTATGTGACCGGGGCC TATGGCGGCACCGAATCGGTGACCCTGACGACGGCGCAGCTTCCGTCTCACCAGCATCAGGTGGTGGGGGACCAAACCGT CGGCGCAACCAATCCGGCCGACGACAACTATCTGGCCGTGCCCATCTACAACGGCACCCAAAAAAGTCTCTACAACTCGG GGACCAAGCCTGTTCCGCTCAATCCAGCATCGGTCAGCACAGTCGGAGGAGGGGCGGCCCACACCAACACGCAGCCCTAC CTGGCGCTTGGCTATTGCATTTGTACTAGCGGCTATTACCCGCCCCGTCCCTGA
Upstream 100 bases:
>100_bases TTCTGATTTGACTCATACCCACAATTGTTTTCTCCTTATAGGACACTTCGTTGCAACCAAAACATCCCAGGCGTGACCTG CGATCAAAAAGGAGCGTGAC
Downstream 100 bases:
>100_bases TGAAATGAAGAGGCAAGATCATGGATTCGTATCTCGGTCAGATTATTCTCTTCAGCGGCAGCTATGCCCCCGTCAATTGG GCGGTGTGTGACGGCCACCA
Product: microcystin-dependent protein
Products: NA
Alternate protein names: Phage Tail Collar Domain-Containing Protein; Phage Tail Collar; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Microcystin-Dependent Protein-Like Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase; Cell Wall/Surface Repeat Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTEAFLGEIRLFPLNWAPTGWLPCDGRSMQVSANAALFSLLGNQFGGDAKTTFFLPDLRGRTIMGQGKNPVTGVSYVTGA YGGTESVTLTTAQLPSHQHQVVGDQTVGATNPADDNYLAVPIYNGTQKSLYNSGTKPVPLNPASVSTVGGGAAHTNTQPY LALGYCICTSGYYPPRP
Sequences:
>Translated_177_residues MTEAFLGEIRLFPLNWAPTGWLPCDGRSMQVSANAALFSLLGNQFGGDAKTTFFLPDLRGRTIMGQGKNPVTGVSYVTGA YGGTESVTLTTAQLPSHQHQVVGDQTVGATNPADDNYLAVPIYNGTQKSLYNSGTKPVPLNPASVSTVGGGAAHTNTQPY LALGYCICTSGYYPPRP >Mature_176_residues TEAFLGEIRLFPLNWAPTGWLPCDGRSMQVSANAALFSLLGNQFGGDAKTTFFLPDLRGRTIMGQGKNPVTGVSYVTGAY GGTESVTLTTAQLPSHQHQVVGDQTVGATNPADDNYLAVPIYNGTQKSLYNSGTKPVPLNPASVSTVGGGAAHTNTQPYL ALGYCICTSGYYPPRP
Specific function: Unknown
COG id: COG4675
COG function: function code S; Microcystin-dependent protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18632; Mature: 18501
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAFLGEIRLFPLNWAPTGWLPCDGRSMQVSANAALFSLLGNQFGGDAKTTFFLPDLRG CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCC RTIMGQGKNPVTGVSYVTGAYGGTESVTLTTAQLPSHQHQVVGDQTVGATNPADDNYLAV CEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEE PIYNGTQKSLYNSGTKPVPLNPASVSTVGGGAAHTNTQPYLALGYCICTSGYYPPRP EEECCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure TEAFLGEIRLFPLNWAPTGWLPCDGRSMQVSANAALFSLLGNQFGGDAKTTFFLPDLRG CCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCC RTIMGQGKNPVTGVSYVTGAYGGTESVTLTTAQLPSHQHQVVGDQTVGATNPADDNYLAV CEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEE PIYNGTQKSLYNSGTKPVPLNPASVSTVGGGAAHTNTQPYLALGYCICTSGYYPPRP EEECCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA