| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310520
Identifier: 83310520
GI number: 83310520
Start: 1549606
End: 1550037
Strand: Reverse
Name: 83310520
Synonym: amb1421
Alternate gene names: NA
Gene position: 1550037-1549606 (Counterclockwise)
Preceding gene: 83310523
Following gene: 83310518
Centisome position: 31.21
GC content: 66.44
Gene sequence:
>432_bases GTGACGTCCTGCCGGTCCTGCCGGCGGCCAAGCCAGCGGATGGCAACGGCCTCGCCCCGCCCAAGCCCAACCTGGCGGTC GGCACAGACGGGCCCGATGTTCAGGCCGCCGTCGGGCGCCCCGGTCAGTTCGGTCTGCGCATCGCTCCAATGGAATGCGG TGTCGTCCCATGCTCCGGCCATCCCCGCGGATGCCGTTGCTGCAATGGTCTTGCCCGGCTTGGCCGAAACCATGCGTCCT CCCAGACGTTATCTTGTTCGACGACCCCTCGAGACGATCCCGCGCCCCAAGGCTCCCGCCCCCGGTGTTGGGCGACATTC TGTCCGCCCGGACCGCCCCGTGCAACAAAAGGAATTGCAGGGCACCGATGCGCCATGGAGATATTTTATGTTGCGGAACT GCCGCGGCGCGATACTCGACCCAGGGTTATGA
Upstream 100 bases:
>100_bases CGTCCGTCCCAGCAGCACGGCGACGGTCTCGCCCGGCTGCAGGCCCAAATCGGCCAGCACGCGGGCGATCCGCCCCGATT GCTCGGCCAGCTGGCCATAG
Downstream 100 bases:
>100_bases CGCCGGCCTCCGGCTCATCGGGCGGCCAGGGCACCGCCCTCGACCAGCACGGCGGCGATCCTCTCGCCGATGGCCTTGTT GAAGGCGGGCGAATAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTSCRSCRRPSQRMATASPRPSPTWRSAQTGPMFRPPSGAPVSSVCASLQWNAVSSHAPAIPADAVAAMVLPGLAETMRP PRRYLVRRPLETIPRPKAPAPGVGRHSVRPDRPVQQKELQGTDAPWRYFMLRNCRGAILDPGL
Sequences:
>Translated_143_residues MTSCRSCRRPSQRMATASPRPSPTWRSAQTGPMFRPPSGAPVSSVCASLQWNAVSSHAPAIPADAVAAMVLPGLAETMRP PRRYLVRRPLETIPRPKAPAPGVGRHSVRPDRPVQQKELQGTDAPWRYFMLRNCRGAILDPGL >Mature_142_residues TSCRSCRRPSQRMATASPRPSPTWRSAQTGPMFRPPSGAPVSSVCASLQWNAVSSHAPAIPADAVAAMVLPGLAETMRPP RRYLVRRPLETIPRPKAPAPGVGRHSVRPDRPVQQKELQGTDAPWRYFMLRNCRGAILDPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15631; Mature: 15500
Theoretical pI: Translated: 12.07; Mature: 12.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCRSCRRPSQRMATASPRPSPTWRSAQTGPMFRPPSGAPVSSVCASLQWNAVSSHAPA CCCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC IPADAVAAMVLPGLAETMRPPRRYLVRRPLETIPRPKAPAPGVGRHSVRPDRPVQQKELQ CCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCC GTDAPWRYFMLRNCRGAILDPGL CCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TSCRSCRRPSQRMATASPRPSPTWRSAQTGPMFRPPSGAPVSSVCASLQWNAVSSHAPA CCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC IPADAVAAMVLPGLAETMRPPRRYLVRRPLETIPRPKAPAPGVGRHSVRPDRPVQQKELQ CCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCC GTDAPWRYFMLRNCRGAILDPGL CCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA