Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310518

Identifier: 83310518

GI number: 83310518

Start: 1547948

End: 1548349

Strand: Reverse

Name: 83310518

Synonym: amb1419

Alternate gene names: NA

Gene position: 1548349-1547948 (Counterclockwise)

Preceding gene: 83310520

Following gene: 83310511

Centisome position: 31.17

GC content: 67.16

Gene sequence:

>402_bases
ATGTTTGAACTGCACCAAAGAATCGCCGCTGACACCGTTCCGGTGACCGAATGGCCCCTCTGCCGGGTGCTGCTCATGAA
CGACAGCACCTATCCCTGGCTACTGCTGGTCCCCCGCCGGGCCGGCGTGGTCGAGATCACCGACCTGGATCCCGCCGACC
AGCACGCTCTGCTCGACGAAATCGCCCGCGCCTCGACGGCGCTCCGCCAGGCGCTGGCCCCTCACCGTATCAACGTCGCC
GCCTTGGGCAATGTGGTGGCGCAATTGCACGTGCACGTCATCGCCCGCGACACCGACGATGCCGCCTGGCCCAAGCCGGT
GTGGGGCGCCGTTCCGGCAACGCCCTATACTCCGGAGGCGCTGGAGACGCGTCTGGCCCAATTGCGGGCGGTGCTGGGAT
AA

Upstream 100 bases:

>100_bases
ACGGATTGGTGCGGTTGCGACGCATGGGGAAAGCCCTTTCGAAAGCGGCGCTTCCTGATACCTTGAACACTACCTCCGGC
GCAACGTGAAGAACCCATGC

Downstream 100 bases:

>100_bases
GCCACCGGGCGATTGCCCGGACCCATTTGGGGTTCACCCCGATCGGGAGTGGGCGGAAGCCCACCGGATGGACAAGAAGA
AACGGCGCCGGATCACTCCG

Product: diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Products: NA

Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; Histidine Triad Domain Protein; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Family Protein; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDEIARASTALRQALAPHRINVA
ALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEALETRLAQLRAVLG

Sequences:

>Translated_133_residues
MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDEIARASTALRQALAPHRINVA
ALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEALETRLAQLRAVLG
>Mature_133_residues
MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDEIARASTALRQALAPHRINVA
ALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEALETRLAQLRAVLG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14635; Mature: 14635

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDE
CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHH
IARASTALRQALAPHRINVAALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHH
LETRLAQLRAVLG
HHHHHHHHHHHCC
>Mature Secondary Structure
MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDE
CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHH
IARASTALRQALAPHRINVAALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHH
LETRLAQLRAVLG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA