| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310518
Identifier: 83310518
GI number: 83310518
Start: 1547948
End: 1548349
Strand: Reverse
Name: 83310518
Synonym: amb1419
Alternate gene names: NA
Gene position: 1548349-1547948 (Counterclockwise)
Preceding gene: 83310520
Following gene: 83310511
Centisome position: 31.17
GC content: 67.16
Gene sequence:
>402_bases ATGTTTGAACTGCACCAAAGAATCGCCGCTGACACCGTTCCGGTGACCGAATGGCCCCTCTGCCGGGTGCTGCTCATGAA CGACAGCACCTATCCCTGGCTACTGCTGGTCCCCCGCCGGGCCGGCGTGGTCGAGATCACCGACCTGGATCCCGCCGACC AGCACGCTCTGCTCGACGAAATCGCCCGCGCCTCGACGGCGCTCCGCCAGGCGCTGGCCCCTCACCGTATCAACGTCGCC GCCTTGGGCAATGTGGTGGCGCAATTGCACGTGCACGTCATCGCCCGCGACACCGACGATGCCGCCTGGCCCAAGCCGGT GTGGGGCGCCGTTCCGGCAACGCCCTATACTCCGGAGGCGCTGGAGACGCGTCTGGCCCAATTGCGGGCGGTGCTGGGAT AA
Upstream 100 bases:
>100_bases ACGGATTGGTGCGGTTGCGACGCATGGGGAAAGCCCTTTCGAAAGCGGCGCTTCCTGATACCTTGAACACTACCTCCGGC GCAACGTGAAGAACCCATGC
Downstream 100 bases:
>100_bases GCCACCGGGCGATTGCCCGGACCCATTTGGGGTTCACCCCGATCGGGAGTGGGCGGAAGCCCACCGGATGGACAAGAAGA AACGGCGCCGGATCACTCCG
Product: diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; Histidine Triad Domain Protein; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Family Protein; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDEIARASTALRQALAPHRINVA ALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEALETRLAQLRAVLG
Sequences:
>Translated_133_residues MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDEIARASTALRQALAPHRINVA ALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEALETRLAQLRAVLG >Mature_133_residues MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDEIARASTALRQALAPHRINVA ALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEALETRLAQLRAVLG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14635; Mature: 14635
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDE CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHH IARASTALRQALAPHRINVAALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHH LETRLAQLRAVLG HHHHHHHHHHHCC >Mature Secondary Structure MFELHQRIAADTVPVTEWPLCRVLLMNDSTYPWLLLVPRRAGVVEITDLDPADQHALLDE CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHH IARASTALRQALAPHRINVAALGNVVAQLHVHVIARDTDDAAWPKPVWGAVPATPYTPEA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHH LETRLAQLRAVLG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA