Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310511

Identifier: 83310511

GI number: 83310511

Start: 1537802

End: 1538566

Strand: Reverse

Name: 83310511

Synonym: amb1412

Alternate gene names: NA

Gene position: 1538566-1537802 (Counterclockwise)

Preceding gene: 83310518

Following gene: 83310510

Centisome position: 30.97

GC content: 64.58

Gene sequence:

>765_bases
ATGGGTTGGAGACGGCTGATGACCATGGGCAGGCCAACCCGTTTCTTTGCGGGACTAATCCTTCTCCTGGCGGGGGCATC
CGCCGCCGCCGCGGCAGAGCCGCGAGTCCTTGAATACTCCTATCCTGACCAGTCGGTGTGGACCACCCGCCTAGATGCCC
GAGGCGAGCCCGACAATCCGCTGCTGCGCCTGGCCGCGCCCCTGTTCCAGCAGGCGGGCATTCCCTGGCGGGCGCGCGGG
CTGCCGGCGGCGCGCCTGTTCGAGCATCTGCGCGATGGCCAGACCGACTTTTCCATCCTGGTGAAGGGAACGGTGCTGGA
CAAGTGCTGCCTGATCAGCAAGCGGCCAGTGGCCGGCACCGAATTGCGGGTCTACCATCGCAAGGGCAAACGCCCCATCA
CCTCCAGGGAGGATCTGGCCGGCAAGGAGGTGATCACCGTCCACGGCTATACTTACGGCAGCCTCCTGCCTTTCATCAAG
GACCCGGCCAACCGCATCGGCAACAACGGAACCGTCAGCCATGAATCGGCCTTTGCCATGCTGGAGCGCGGGCGAGCCGA
CTACCTGCTGGATTATGCCGGACCGGCCCAGGAGGTCCTGGCGGAGCGGCCGATCCGCGACCTGGAATACGACGTCATCG
ACCGCCTCGACGTGCATCTGGTCCTCAACCGGACCTTCCCCGACGCCGAGGCACTCATGAGTCGGCTGGAAACCATTGCC
GCGGGATTGACCATCGAAGGCGTTCCAAAGCCAAACCTAAAGTAG

Upstream 100 bases:

>100_bases
AGGGAAAAAGAAGGCCACGGCAAACATATGTCGCCCACGCCCTTCCTGCCGGATTGAGAACCCCACGACTTTCGGCTAGC
ATCCACGGATGGGGAAACTG

Downstream 100 bases:

>100_bases
TCCATACGAATGCTTTGGGCTCGTATCCCTTCAGAGATGCGTTTAGGCTGTCCCGCATCATGATGATGATGCTGTTGCGC
AAGAAGGGACGGGAAAACAG

Product: ABC-type amino acid transport/signal transduction systems

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MGWRRLMTMGRPTRFFAGLILLLAGASAAAAAEPRVLEYSYPDQSVWTTRLDARGEPDNPLLRLAAPLFQQAGIPWRARG
LPAARLFEHLRDGQTDFSILVKGTVLDKCCLISKRPVAGTELRVYHRKGKRPITSREDLAGKEVITVHGYTYGSLLPFIK
DPANRIGNNGTVSHESAFAMLERGRADYLLDYAGPAQEVLAERPIRDLEYDVIDRLDVHLVLNRTFPDAEALMSRLETIA
AGLTIEGVPKPNLK

Sequences:

>Translated_254_residues
MGWRRLMTMGRPTRFFAGLILLLAGASAAAAAEPRVLEYSYPDQSVWTTRLDARGEPDNPLLRLAAPLFQQAGIPWRARG
LPAARLFEHLRDGQTDFSILVKGTVLDKCCLISKRPVAGTELRVYHRKGKRPITSREDLAGKEVITVHGYTYGSLLPFIK
DPANRIGNNGTVSHESAFAMLERGRADYLLDYAGPAQEVLAERPIRDLEYDVIDRLDVHLVLNRTFPDAEALMSRLETIA
AGLTIEGVPKPNLK
>Mature_253_residues
GWRRLMTMGRPTRFFAGLILLLAGASAAAAAEPRVLEYSYPDQSVWTTRLDARGEPDNPLLRLAAPLFQQAGIPWRARGL
PAARLFEHLRDGQTDFSILVKGTVLDKCCLISKRPVAGTELRVYHRKGKRPITSREDLAGKEVITVHGYTYGSLLPFIKD
PANRIGNNGTVSHESAFAMLERGRADYLLDYAGPAQEVLAERPIRDLEYDVIDRLDVHLVLNRTFPDAEALMSRLETIAA
GLTIEGVPKPNLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28203; Mature: 28072

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWRRLMTMGRPTRFFAGLILLLAGASAAAAAEPRVLEYSYPDQSVWTTRLDARGEPDNP
CCHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCH
LLRLAAPLFQQAGIPWRARGLPAARLFEHLRDGQTDFSILVKGTVLDKCCLISKRPVAGT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCCCC
ELRVYHRKGKRPITSREDLAGKEVITVHGYTYGSLLPFIKDPANRIGNNGTVSHESAFAM
EEEEEECCCCCCCCCCHHCCCCEEEEEECCCHHHHHHHHHCHHHHCCCCCCCCHHHHHHH
LERGRADYLLDYAGPAQEVLAERPIRDLEYDVIDRLDVHLVLNRTFPDAEALMSRLETIA
HHCCCCCEEEECCCCHHHHHHHCCHHHCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHH
AGLTIEGVPKPNLK
HCCEECCCCCCCCC
>Mature Secondary Structure 
GWRRLMTMGRPTRFFAGLILLLAGASAAAAAEPRVLEYSYPDQSVWTTRLDARGEPDNP
CHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCH
LLRLAAPLFQQAGIPWRARGLPAARLFEHLRDGQTDFSILVKGTVLDKCCLISKRPVAGT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCCCC
ELRVYHRKGKRPITSREDLAGKEVITVHGYTYGSLLPFIKDPANRIGNNGTVSHESAFAM
EEEEEECCCCCCCCCCHHCCCCEEEEEECCCHHHHHHHHHCHHHHCCCCCCCCHHHHHHH
LERGRADYLLDYAGPAQEVLAERPIRDLEYDVIDRLDVHLVLNRTFPDAEALMSRLETIA
HHCCCCCEEEECCCCHHHHHHHCCHHHCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHH
AGLTIEGVPKPNLK
HCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA