Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310492

Identifier: 83310492

GI number: 83310492

Start: 1513752

End: 1515953

Strand: Reverse

Name: 83310492

Synonym: amb1393

Alternate gene names: NA

Gene position: 1515953-1513752 (Counterclockwise)

Preceding gene: 83310493

Following gene: 83310489

Centisome position: 30.52

GC content: 65.03

Gene sequence:

>2202_bases
ATGAGCACCAATATCCAGCAAGAGACCATGAGCTTTGCCCAGATCGCGGCAACGCTCACCGCGCCGTCGACGTCCGACTA
CGACGCCGTCGTGTCCCTGGGACAGCAGCAGCTCGACCAGTTTCTGTTCAGCACCTATGCCGCCCAGAACCATGCCCAGG
TGGCGGTGTCGGGCCTGTCCCCGGTGGTGGACGGCATCTACGACGCCTTTTCCATGCGGGTCGCGCCCCCCATGCTGCAA
TTCGTCAGCGATCAGGCCCAGCTCAGCTACCAGGTCTACGCCGGCTGCCTGCTTCAGATCGATGCCGCAGGCAATCCCAG
CTACATGGTGGATTACGGGTCCAGCGGCTCGACCCTGATCGGCACCTATCCCCTGACCACCGCCCAGGGCGCCGACAACA
GCGGCAGCGTGGTGATCGACTTCGCCCAGACCAAGAATCTGACCGGCCAGTGGACCGGCCAGCTGGCGGGCGTCGTGGCG
AACTCGCAGGAGGCCCAGGAGATTTTCAGCGCCATCGGCGGCTATTTCAGCAGCAATCCGCTGATCTATACGCTGGGCTC
GGTCAATACCAGCGGGACTCTGGCGGCGCTGACCCCCACCTCGTTCACCTTCTCCACCCAGAACGCCGTCAACAATCCCG
GCTCCAACCTGATGCTGCTGATCACCACCGACGGCAGCGCGGGGGGCAACGCGCCCTCGGCGGACATCATTCCCTCGGGC
AGTTCCGTGGGTGTGCTGGTGTCCAACCGCGTGATGTTCCAGGAGGTGTTCCCCGACCTGATGAACCAGGCCACCAAGGC
CCAGAATGGCAATTTCACCTATCAGACCATCGGAGCCTCCTCCGCCTATCAGACGGTCAGCACCGCCGGCAGCCTGGACG
TGGGCACCATTCAGGAGGGCAACGCCCTGCAGGGCGGCGTGTGGAGCAGTGACGCCGATTACAATCCGGTGGACCTCTAC
GTGCCCCTGAGCGGCATGACCATGACTCCCGGGGCCAGCGGCATGGGTTTCTCCTGGACCTCCGACTGGAACCAGCTCTG
GACCTCCATCACCTATACCAACGCCTTCAACAGCGTGATCGAGAACCGCAATCTCGAGACGGTTGGCCTTCAGGTCACCT
CGACGGCGCTGCTGGTCCCGACGGTGACCAGCGCCACCAACGACACCGTGGCGTTCAGCGGTTCCTTCGCCACCAACACC
GAGCCGACCACCAATTTCTCCATCTGGCAGGAACTGTTCGAAGGCGATGTGAATCTGGGATCATCGATCACCGATCCCAT
CAACGAAGCCCTCGGCGGCTGGCTCGACAACCTGGGCCTGCCGCAGGTCAGCACCTTCCTGATCGACAACCTGCTGTTCC
CGGCCTCGGGCCTTGTCGCCATCAACAATGCGGCCATTCCCTGCGACTTCTACACGGCGGGCAACATCGAAAGCCCATTG
TCGCTGTCGCCCGGCATCAGCTCCCTGTCGGCTGGCCAGAGCGTGACTCTCAGCCTCAATCAGGCCGTCGCCCAGGTGGA
ATGGTCGATCACCCCGCCCATCGGCAGCGTCACCAACGGAGTCTACACCGCGCCGTCCCAGATTGCCGCCCCGTCGCGAG
TGGTGATCCAGGCCCTGAACGCCGGCGACCTGCAGCAGGTGGCCTATGCCCTGGTCGAGTTGTCTCCGACCCTGGCGGCG
CTGACCATAACCCCCGCCAACGTCACCCTGGCCGCCGGCGGCGCATCGTTCCAGCTGCAGGCCATCGATGCCGATGGCCA
GGTGGATTCCAACGCCACCTTCACAGCCAGCCTGGGCGTGGCCAAGAAGAACATGGAGGGCGACTGGTTCTACACGCCCC
CCGGCTCGGTGTCGGCCCCCACCCCGGTCACCATCACCGCCCAGAGCAGCGCGGGCACCGCCACCGCCACCTGGAACGTG
GTGCCGGTCGACGAGGCCTTTAACGTGACCTGCCCGGTGACCTCGCTGTCGGCGGGTCAGAGTGCGGTGCTGACCGCCAC
CACCAGCCTGGGCATCCCCCAGGCGCTGTGGTGCATGATGCCGGAAGCCGGCTCGGTGATCGCCACCGGCCTGATGACGG
CACAGTACACCGCGCCGGCCACCGTCACCTCGGCCCAGACCGTGACTCTTTGCGGCTTTGGCGGCAGTGCGACCACGGCC
CTGGGCTGCGCGATGCTTTCCATCGACCTGACTCCGGGCTGA

Upstream 100 bases:

>100_bases
CGTCATGACGGTCATCAACATGTTCCTGAACTTCTTCGCGCCGACCCTGGAGCTGAAGATGGAACAGGAAGGCCAATAGG
AACGCGGGGAGGAGACGACA

Downstream 100 bases:

>100_bases
GGCATGAAGAAAGCCCCCGGCCTCGCGGCCGGGGGCTTTTTCGTCGCCGTGACGGCGGGACCGGTCAGCCGCCCTGCTTG
GCGGCGGAGCGGCGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 733; Mature: 732

Protein sequence:

>733_residues
MSTNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLSPVVDGIYDAFSMRVAPPMLQ
FVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLIGTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVA
NSQEAQEIFSAIGGYFSSNPLIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG
SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEGNALQGGVWSSDADYNPVDLY
VPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVIENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNT
EPTTNFSIWQELFEGDVNLGSSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL
SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALNAGDLQQVAYALVELSPTLAA
LTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGVAKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNV
VPVDEAFNVTCPVTSLSAGQSAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA
LGCAMLSIDLTPG

Sequences:

>Translated_733_residues
MSTNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLSPVVDGIYDAFSMRVAPPMLQ
FVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLIGTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVA
NSQEAQEIFSAIGGYFSSNPLIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG
SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEGNALQGGVWSSDADYNPVDLY
VPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVIENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNT
EPTTNFSIWQELFEGDVNLGSSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL
SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALNAGDLQQVAYALVELSPTLAA
LTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGVAKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNV
VPVDEAFNVTCPVTSLSAGQSAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA
LGCAMLSIDLTPG
>Mature_732_residues
STNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLSPVVDGIYDAFSMRVAPPMLQF
VSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLIGTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVAN
SQEAQEIFSAIGGYFSSNPLIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSGS
SVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEGNALQGGVWSSDADYNPVDLYV
PLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVIENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNTE
PTTNFSIWQELFEGDVNLGSSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPLS
LSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALNAGDLQQVAYALVELSPTLAAL
TITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGVAKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNVV
PVDEAFNVTCPVTSLSAGQSAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTAL
GCAMLSIDLTPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75478; Mature: 75346

Theoretical pI: Translated: 3.36; Mature: 3.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLS
CCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH
PVVDGIYDAFSMRVAPPMLQFVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLI
HHHHHHHHHHHHHCCCHHHHHHCHHHHEEEEEEEEEEEEEECCCCCCEEEEECCCCCEEE
GTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVANSQEAQEIFSAIGGYFSSNP
EEECCEECCCCCCCCCEEEEEHHCCCCCCEECCEEEEEEECCHHHHHHHHHHCCCCCCCC
LIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG
EEEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCC
SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEG
CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCC
NALQGGVWSSDADYNPVDLYVPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVI
CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHEEEEHHHHHHHH
ENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNTEPTTNFSIWQELFEGDVNLG
HCCCCEEEEEEEECEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC
SSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCC
SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALN
CCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCEEECCHHHCCCCEEEEEECC
AGDLQQVAYALVELSPTLAALTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGV
CCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCC
AKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNVVPVDEAFNVTCPVTSLSAGQ
EECCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEECCCEECCCCC
SAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA
CEEEEEECCCCCCHHHHHCCCCCCCEEEHHEEEEECCCCCEECCCCEEEEEECCCCHHHH
LGCAMLSIDLTPG
HEEEEEEEECCCC
>Mature Secondary Structure 
STNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLS
CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH
PVVDGIYDAFSMRVAPPMLQFVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLI
HHHHHHHHHHHHHCCCHHHHHHCHHHHEEEEEEEEEEEEEECCCCCCEEEEECCCCCEEE
GTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVANSQEAQEIFSAIGGYFSSNP
EEECCEECCCCCCCCCEEEEEHHCCCCCCEECCEEEEEEECCHHHHHHHHHHCCCCCCCC
LIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG
EEEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCC
SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEG
CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCC
NALQGGVWSSDADYNPVDLYVPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVI
CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHEEEEHHHHHHHH
ENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNTEPTTNFSIWQELFEGDVNLG
HCCCCEEEEEEEECEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC
SSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCC
SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALN
CCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCEEECCHHHCCCCEEEEEECC
AGDLQQVAYALVELSPTLAALTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGV
CCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCC
AKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNVVPVDEAFNVTCPVTSLSAGQ
EECCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEECCCEECCCCC
SAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA
CEEEEEECCCCCCHHHHHCCCCCCCEEEHHEEEEECCCCCEECCCCEEEEEECCCCHHHH
LGCAMLSIDLTPG
HEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA