| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is rhlE [H]
Identifier: 83310484
GI number: 83310484
Start: 1502815
End: 1504566
Strand: Reverse
Name: rhlE [H]
Synonym: amb1385
Alternate gene names: 83310484
Gene position: 1504566-1502815 (Counterclockwise)
Preceding gene: 83310489
Following gene: 83310483
Centisome position: 30.29
GC content: 68.26
Gene sequence:
>1752_bases ATGGGGAAACCGTGTTCCGTCATTGACTTAAGGCGCCGAAACCCTATTATCCCGCCCCACATGACGACCCATGACGACAT CGGCCGCTCGGACGGCCCGGAAACCGCCACGACCACCTTCGAAGACCTCGGCCTCGGGCCGGAGATTCTGAAGGCGCTCG CTGAATCGGGGTATACGCACCCCACCCCCATCCAGGCACAGGCGATCCCTGTGGTCCTCATGGGCCGAGACGTGCTGGGC TGCGCCCAGACCGGCACCGGCAAGACGGCGTCCTTCACGCTGCCCATGATCGAGATCCTGGCAGCCGGCCGCGCCAAGGC GCGCATGCCGCGCTCGCTGATCCTGGCTCCCACCCGGGAACTGGCCGCCCAGGTGGCGGAGAACTTCGATAAATACGGCA AGTACCATCCGCTCAAGAAGGCGCTGATCATCGGCGGCGAATCCATGAGCGATCAGGTGGCCCTGCTGGACCGCGGCGTC GACGTGCTGATCGCCACGCCGGGCCGCCTGCTCGACATGTTCGAGCGCGGCCGCATTCTGCTGAACGACGTCAAGGTCCT GGTGATCGACGAAGCCGACCGCATGCTGGACATGGGCTTCATCCCCGATGTGGAGAAGATCGTCGGTCTGCTGCCCAAGA TCCGCCAGACCCTGTTCTTCTCGGCCACCATGGGCCCGGAGATCCGCCGCCTGGCCGACGCCTTCCTGATGAACCCGAAG GAAGTGAAGGTCTCCACCGGCGCCTCGGCCGCCACCACCGTGGTCCAGGCCCTGGCCGTGGTCGAGGAGATCGACAAGCG CGAGACGCTCCGCCACCTGATCCGCATCGAGGAAGTGAAGAACGCCTTCATCTTCTGCAATCGCAAGCGCGACGTCGACG TGCTGTTCCGCTCCCTGAAGAAGCATGGCTTCGACGTGGTGCAACTGCACGGCGACATGGCGCAAAGCGCCCGCGGCGAA ACGCTGGAGAAGTTCAAGAAGGGCGAAGCCCGCCTGATGGTCTGCTCCGACGTCGCCGCGCGCGGCATCGACATCTCGGC GGTCAGCCACGTCTTCAATTTCGACGTGCCGATCCATGCCGAGGATTACGTCCACCGCATCGGCCGCACCGGCCGCGCCG GCATGGAAGGCCACGCGTTCACCATCGCCAGCCCTGATGACGGCCGCTTCGTCGGCGCCATCGAGGCCATGATCGGCACC ACCATTCCCCGCATCTCGGTCGAGGGCGTTCCCGCCCTGGACCTGGACATGACCGCCCGCAAGGGCCGTGGCGGACGCGG CGCCCCCAAGGATGCCAAGCGCCCGGCCCGTGGCAAGGACGACGAGGCCAAGCCCCGCCGCGAGCGCCGCCCGCGCCGTG ACGAGGCCCCGGTCGCCGAGGCCGCCCCCGTCGAAGCCGCCGCCCCCGAAGAGGTGATCGAGCGCCCCCGGGAGGAACGT CCCGAGCGCTCCCGTGGCCGTGGCCGGGACCGTGAAGAACCCCGGCGCGACGAACCCCGCCGCGAGGAGCCCCGCCGTGG CGGCCGCAATCGCGACGAAGGCCGCCGGGACGAGCGCGGCGGACGCCGCCGTGGCCGCATCGACGAGCTGGGCATCGGCG AGATGCTGCATCCCGACGGCGTGATCGGCTTTGGCGACCACATGCCCGACTTCATCGCCGCCGCGGTGCCGCTGCCGGTC AAGACCAGCAAGTCCACCGTCGACGACGACAGCGACGCCGACGCCGACCTGGACGCCGATTCCGAGGATTGA
Upstream 100 bases:
>100_bases CGTCGACGATCAGCAGGCTTGAACGGGGGGCTTCGATGAGCATGGCGGGCGTCCTCCTGGGGTCCGGGACCAGCCTAAAC CCGCCTCCAGGCAGGCTACA
Downstream 100 bases:
>100_bases CGGCATAATGGGCGAGTCACTCCGGTGGCTCGCCGACACGACGGGAGACCTCCCATGCAGACCATCTTCGTCCAGGTGAA GTGCGAACTGGGGCTGGCCT
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MGKPCSVIDLRRRNPIIPPHMTTHDDIGRSDGPETATTTFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLG CAQTGTGKTASFTLPMIEILAAGRAKARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLDRGV DVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQTLFFSATMGPEIRRLADAFLMNPK EVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIEEVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGE TLEKFKKGEARLMVCSDVAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAMIGT TIPRISVEGVPALDLDMTARKGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAPVAEAAPVEAAAPEEVIERPREER PERSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRDERGGRRRGRIDELGIGEMLHPDGVIGFGDHMPDFIAAAVPLPV KTSKSTVDDDSDADADLDADSED
Sequences:
>Translated_583_residues MGKPCSVIDLRRRNPIIPPHMTTHDDIGRSDGPETATTTFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLG CAQTGTGKTASFTLPMIEILAAGRAKARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLDRGV DVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQTLFFSATMGPEIRRLADAFLMNPK EVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIEEVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGE TLEKFKKGEARLMVCSDVAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAMIGT TIPRISVEGVPALDLDMTARKGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAPVAEAAPVEAAAPEEVIERPREER PERSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRDERGGRRRGRIDELGIGEMLHPDGVIGFGDHMPDFIAAAVPLPV KTSKSTVDDDSDADADLDADSED >Mature_582_residues GKPCSVIDLRRRNPIIPPHMTTHDDIGRSDGPETATTTFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGC AQTGTGKTASFTLPMIEILAAGRAKARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLDRGVD VLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQTLFFSATMGPEIRRLADAFLMNPKE VKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIEEVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGET LEKFKKGEARLMVCSDVAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAMIGTT IPRISVEGVPALDLDMTARKGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAPVAEAAPVEAAAPEEVIERPREERP ERSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRDERGGRRRGRIDELGIGEMLHPDGVIGFGDHMPDFIAAAVPLPVK TSKSTVDDDSDADADLDADSED
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=38.7755102040816, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=41.5254237288136, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=41.5254237288136, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI301171467, Length=364, Percent_Identity=41.4835164835165, Blast_Score=266, Evalue=6e-71, Organism=Homo sapiens, GI87196351, Length=364, Percent_Identity=41.4835164835165, Blast_Score=265, Evalue=9e-71, Organism=Homo sapiens, GI301171475, Length=364, Percent_Identity=41.4835164835165, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI20149629, Length=400, Percent_Identity=39.25, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI169881239, Length=364, Percent_Identity=41.2087912087912, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI13514809, Length=364, Percent_Identity=41.2087912087912, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=40.6162464985994, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI41327773, Length=374, Percent_Identity=39.0374331550802, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=40.3899721448468, Blast_Score=258, Evalue=2e-68, Organism=Homo sapiens, GI45446747, Length=399, Percent_Identity=37.0927318295739, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI45446743, Length=399, Percent_Identity=37.0927318295739, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=36.0742705570292, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=39.1061452513966, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=39.1061452513966, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=39.1061452513966, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=39.1061452513966, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=37.8082191780822, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=36.4130434782609, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=38.28125, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=36.9444444444444, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI164419743, Length=365, Percent_Identity=34.7945205479452, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI51094101, Length=365, Percent_Identity=34.7945205479452, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI55749865, Length=396, Percent_Identity=35.8585858585859, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI41327776, Length=396, Percent_Identity=36.6161616161616, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI13514831, Length=395, Percent_Identity=35.4430379746835, Blast_Score=229, Evalue=8e-60, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=37.1273712737127, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI13129006, Length=411, Percent_Identity=34.5498783454988, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=35.230352303523, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=35.0515463917526, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI38327634, Length=366, Percent_Identity=34.9726775956284, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.830985915493, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=30.7042253521127, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=30.7042253521127, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=34.4262295081967, Blast_Score=192, Evalue=9e-49, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=34.4262295081967, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI8922886, Length=392, Percent_Identity=31.6326530612245, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=31.3775510204082, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI17505907, Length=446, Percent_Identity=29.372197309417, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI38569505, Length=381, Percent_Identity=31.496062992126, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=29.9748110831234, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569503, Length=381, Percent_Identity=32.0209973753281, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=31.6939890710383, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI164419732, Length=393, Percent_Identity=31.5521628498728, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI4826686, Length=340, Percent_Identity=31.1764705882353, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=31.5942028985507, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI256223453, Length=358, Percent_Identity=30.7262569832402, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI256773275, Length=392, Percent_Identity=31.6326530612245, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=31.4935064935065, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI154759257, Length=406, Percent_Identity=28.0788177339901, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI20336298, Length=246, Percent_Identity=34.5528455284553, Blast_Score=130, Evalue=2e-30, Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=46.524064171123, Blast_Score=338, Evalue=6e-94, Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=42.0485175202156, Blast_Score=292, Evalue=4e-80, Organism=Escherichia coli, GI1790214, Length=410, Percent_Identity=39.5121951219512, Blast_Score=270, Evalue=3e-73, Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=40.5555555555556, Blast_Score=235, Evalue=7e-63, Organism=Escherichia coli, GI1787605, Length=363, Percent_Identity=36.9146005509642, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI48994977, Length=348, Percent_Identity=23.2758620689655, Blast_Score=74, Evalue=3e-14, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=41.5789473684211, Blast_Score=287, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17510309, Length=380, Percent_Identity=41.3157894736842, Blast_Score=264, Evalue=9e-71, Organism=Caenorhabditis elegans, GI17510307, Length=380, Percent_Identity=41.3157894736842, Blast_Score=264, Evalue=9e-71, Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=40.7894736842105, Blast_Score=264, Evalue=1e-70, Organism=Caenorhabditis elegans, GI115533224, Length=421, Percent_Identity=37.7672209026128, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=39.1780821917808, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17552642, Length=409, Percent_Identity=36.919315403423, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=35.1206434316354, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=37.2602739726027, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=36.986301369863, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=38.3098591549296, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=36.986301369863, Blast_Score=238, Evalue=8e-63, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=35.3092783505155, Blast_Score=238, Evalue=8e-63, Organism=Caenorhabditis elegans, GI17507945, Length=346, Percent_Identity=39.8843930635838, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=35.149863760218, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17509811, Length=369, Percent_Identity=37.1273712737127, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71999644, Length=365, Percent_Identity=32.3287671232877, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=32.3287671232877, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.8525469168901, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17537549, Length=428, Percent_Identity=33.411214953271, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=377, Percent_Identity=32.6259946949602, Blast_Score=208, Evalue=7e-54, Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=31.5508021390374, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=32.4396782841823, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=34.0314136125654, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115532546, Length=383, Percent_Identity=33.9425587467363, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=35.149863760218, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI193206561, Length=385, Percent_Identity=31.1688311688312, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=31.8766066838046, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17536099, Length=411, Percent_Identity=32.1167883211679, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17536101, Length=411, Percent_Identity=32.1167883211679, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI193208216, Length=426, Percent_Identity=31.924882629108, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71990816, Length=348, Percent_Identity=33.0459770114943, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17556951, Length=375, Percent_Identity=31.7333333333333, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI17536103, Length=411, Percent_Identity=32.1167883211679, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=30.2564102564103, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=30.5263157894737, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=26.6990291262136, Blast_Score=148, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71997889, Length=425, Percent_Identity=27.0588235294118, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI25148291, Length=440, Percent_Identity=24.5454545454545, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17553716, Length=373, Percent_Identity=27.3458445040214, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=33.1707317073171, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI25148205, Length=338, Percent_Identity=25.4437869822485, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17566630, Length=346, Percent_Identity=25.1445086705202, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=40.3846153846154, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=42.1652421652422, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6321856, Length=424, Percent_Identity=37.9716981132075, Blast_Score=266, Evalue=9e-72, Organism=Saccharomyces cerevisiae, GI6325138, Length=366, Percent_Identity=39.0710382513661, Blast_Score=262, Evalue=9e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=399, Percent_Identity=38.0952380952381, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=381, Percent_Identity=36.745406824147, Blast_Score=254, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=370, Percent_Identity=38.9189189189189, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=38.4615384615385, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=356, Percent_Identity=35.6741573033708, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=31.2649164677804, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=390, Percent_Identity=34.1025641025641, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6322427, Length=373, Percent_Identity=35.656836461126, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=397, Percent_Identity=31.9899244332494, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=35.5437665782493, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=370, Percent_Identity=35.6756756756757, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=381, Percent_Identity=32.8083989501312, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=367, Percent_Identity=33.5149863760218, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=367, Percent_Identity=33.5149863760218, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=488, Percent_Identity=29.5081967213115, Blast_Score=191, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=436, Percent_Identity=31.1926605504587, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=440, Percent_Identity=31.5909090909091, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=408, Percent_Identity=31.8627450980392, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=401, Percent_Identity=30.4239401496259, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=319, Percent_Identity=30.0940438871473, Blast_Score=133, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=401, Percent_Identity=23.9401496259352, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=428, Percent_Identity=25, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=24.7086247086247, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24584994, Length=394, Percent_Identity=36.5482233502538, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI17985987, Length=409, Percent_Identity=38.6308068459658, Blast_Score=266, Evalue=4e-71, Organism=Drosophila melanogaster, GI28574962, Length=388, Percent_Identity=38.1443298969072, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI24642151, Length=374, Percent_Identity=39.572192513369, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24662330, Length=396, Percent_Identity=36.8686868686869, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24584399, Length=364, Percent_Identity=40.3846153846154, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=38.0165289256198, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI281361218, Length=363, Percent_Identity=38.0165289256198, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI24644481, Length=363, Percent_Identity=38.0165289256198, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI24644483, Length=363, Percent_Identity=38.0165289256198, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI24644487, Length=363, Percent_Identity=38.0165289256198, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI45551833, Length=363, Percent_Identity=38.0165289256198, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI24644485, Length=363, Percent_Identity=38.0165289256198, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI24585582, Length=394, Percent_Identity=37.5634517766497, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI21355075, Length=356, Percent_Identity=39.8876404494382, Blast_Score=254, Evalue=2e-67, Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=37.3626373626374, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI21356161, Length=370, Percent_Identity=37.8378378378378, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=36.7123287671233, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=36.1643835616438, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583281, Length=384, Percent_Identity=34.1145833333333, Blast_Score=232, Evalue=7e-61, Organism=Drosophila melanogaster, GI24583279, Length=384, Percent_Identity=34.1145833333333, Blast_Score=232, Evalue=7e-61, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=36.7123287671233, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=36.7123287671233, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=36.7123287671233, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=36.7123287671233, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI28575014, Length=350, Percent_Identity=34.8571428571429, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI281365720, Length=349, Percent_Identity=36.3896848137536, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136814, Length=372, Percent_Identity=36.8279569892473, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI28571808, Length=365, Percent_Identity=35.0684931506849, Blast_Score=205, Evalue=9e-53, Organism=Drosophila melanogaster, GI28571809, Length=365, Percent_Identity=35.0684931506849, Blast_Score=205, Evalue=9e-53, Organism=Drosophila melanogaster, GI24642822, Length=414, Percent_Identity=31.8840579710145, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24581954, Length=374, Percent_Identity=30.7486631016043, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581952, Length=374, Percent_Identity=30.7486631016043, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581956, Length=374, Percent_Identity=30.7486631016043, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI21355559, Length=376, Percent_Identity=34.8404255319149, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24666101, Length=382, Percent_Identity=31.9371727748691, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI20130173, Length=449, Percent_Identity=28.0623608017817, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=28.7878787878788, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24668515, Length=341, Percent_Identity=30.2052785923754, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI17647335, Length=373, Percent_Identity=31.0991957104558, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI19920478, Length=349, Percent_Identity=30.945558739255, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI17136666, Length=407, Percent_Identity=27.2727272727273, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI18859659, Length=228, Percent_Identity=35.0877192982456, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI28571338, Length=228, Percent_Identity=35.0877192982456, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI24640164, Length=366, Percent_Identity=26.5027322404372, Blast_Score=115, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 64143; Mature: 64012
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKPCSVIDLRRRNPIIPPHMTTHDDIGRSDGPETATTTFEDLGLGPEILKALAESGYTH CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHCCCCC PTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIEILAAGRAKARMPRSLILAPTRE CCCCCCCCCCEEEECCCHHHHCCCCCCCCEEEHHHHHHHHHCCCHHHHCCCCEEECCHHH LAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLDRGVDVLIATPGRLLDMFERGRIL HHHHHHHHHHHHCCCCCCHHEEEECCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCEE LNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQTLFFSATMGPEIRRLADAFLMNPK EECCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH EVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIEEVKNAFIFCNRKRDVDVLFRSLK HEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH KHGFDVVQLHGDMAQSARGETLEKFKKGEARLMVCSDVAARGIDISAVSHVFNFDVPIHA HCCCEEEEECCHHHHHHCCHHHHHHHCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCCCCH EDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAMIGTTIPRISVEGVPALDLDMTAR HHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCHHC KGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAPVAEAAPVEAAAPEEVIERPREER CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCC PERSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRDERGGRRRGRIDELGIGEMLHPDG CHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC VIGFGDHMPDFIAAAVPLPVKTSKSTVDDDSDADADLDADSED EEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKPCSVIDLRRRNPIIPPHMTTHDDIGRSDGPETATTTFEDLGLGPEILKALAESGYTH CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHCCCCC PTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIEILAAGRAKARMPRSLILAPTRE CCCCCCCCCCEEEECCCHHHHCCCCCCCCEEEHHHHHHHHHCCCHHHHCCCCEEECCHHH LAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLDRGVDVLIATPGRLLDMFERGRIL HHHHHHHHHHHHCCCCCCHHEEEECCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCEE LNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQTLFFSATMGPEIRRLADAFLMNPK EECCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH EVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIEEVKNAFIFCNRKRDVDVLFRSLK HEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH KHGFDVVQLHGDMAQSARGETLEKFKKGEARLMVCSDVAARGIDISAVSHVFNFDVPIHA HCCCEEEEECCHHHHHHCCHHHHHHHCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCCCCH EDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAMIGTTIPRISVEGVPALDLDMTAR HHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCHHC KGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAPVAEAAPVEAAAPEEVIERPREER CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCC PERSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRDERGGRRRGRIDELGIGEMLHPDG CHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC VIGFGDHMPDFIAAAVPLPVKTSKSTVDDDSDADADLDADSED EEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]