| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is lrp [C]
Identifier: 83310483
GI number: 83310483
Start: 1502521
End: 1502790
Strand: Reverse
Name: lrp [C]
Synonym: amb1384
Alternate gene names: 83310483
Gene position: 1502790-1502521 (Counterclockwise)
Preceding gene: 83310484
Following gene: 83310482
Centisome position: 30.25
GC content: 60.37
Gene sequence:
>270_bases GTGGCTCGCCGACACGACGGGAGACCTCCCATGCAGACCATCTTCGTCCAGGTGAAGTGCGAACTGGGGCTGGCCTATCA GGTCGCCGACGAAGCCGTCGACATCGAACAGGTGTCCGAAGTGCACTCCATCTCCGGTCAGTATGACCTGATGCTGAAGT GCTATCTCGACGACTCGGCCGATATCGGCCAGTTCGTGGTGGACACCATCCAGCGCCTGCCCGGCGTCAAGGACACCTTC ACCCTGATCGCCTTCAAGGCCTTTTCCTGA
Upstream 100 bases:
>100_bases GGTCAAGACCAGCAAGTCCACCGTCGACGACGACAGCGACGCCGACGCCGACCTGGACGCCGATTCCGAGGATTGACGGC ATAATGGGCGAGTCACTCCG
Downstream 100 bases:
>100_bases CCTAAGCGGGCTTTTGCCCCCGATCCCCAAACCGGGAGGCACAGCCTCCGAACGGGTCAGGACGGTCGCCCTGCCGCGCA AGCGGGGATCTTCCCCAGTC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AsnC Family; AsnC/Lrp Family Transcriptional Regulator; Transcription Regulator AsnC-Type-Like Protein; Conserved Domain Protein; Transcriptional Regulator Protein AsnC Family; Transcriptional Regulator Protein; Transcription Regulator; Regulatory Proteins AsnC/Lrp; Transcriptional Regulator Lrp Family; Transcriptional Regulator AsnC Family Protein; Lpr Family Transcriptional Regulator; Regulatory Protein AsnC/Lrp
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MARRHDGRPPMQTIFVQVKCELGLAYQVADEAVDIEQVSEVHSISGQYDLMLKCYLDDSADIGQFVVDTIQRLPGVKDTF TLIAFKAFS
Sequences:
>Translated_89_residues MARRHDGRPPMQTIFVQVKCELGLAYQVADEAVDIEQVSEVHSISGQYDLMLKCYLDDSADIGQFVVDTIQRLPGVKDTF TLIAFKAFS >Mature_88_residues ARRHDGRPPMQTIFVQVKCELGLAYQVADEAVDIEQVSEVHSISGQYDLMLKCYLDDSADIGQFVVDTIQRLPGVKDTFT LIAFKAFS
Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9982; Mature: 9850
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRHDGRPPMQTIFVQVKCELGLAYQVADEAVDIEQVSEVHSISGQYDLMLKCYLDDSA CCCCCCCCCCHHEEEEEEEECCCEEEEHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCC DIGQFVVDTIQRLPGVKDTFTLIAFKAFS CHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure ARRHDGRPPMQTIFVQVKCELGLAYQVADEAVDIEQVSEVHSISGQYDLMLKCYLDDSA CCCCCCCCCHHEEEEEEEECCCEEEEHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCC DIGQFVVDTIQRLPGVKDTFTLIAFKAFS CHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA